Academic literature on the topic 'Fine-resolution'

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Journal articles on the topic "Fine-resolution"

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Green, David G., and Gary S. Dolman. "Fine Resolution Pollen Analysis." Journal of Biogeography 15, no. 4 (July 1988): 685. http://dx.doi.org/10.2307/2845445.

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Fredman, Gabrielle, Sudeshna Sadhu, and Nicholas Rymut. "Fine-tuning inflammation-resolution programs." Current Opinion in Clinical Nutrition & Metabolic Care 20, no. 2 (March 2017): 117–23. http://dx.doi.org/10.1097/mco.0000000000000351.

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Cai, Dingding, Ke Chen, Yanlin Qian, and Joni-Kristian Kämäräinen. "Convolutional low-resolution fine-grained classification." Pattern Recognition Letters 119 (March 2019): 166–71. http://dx.doi.org/10.1016/j.patrec.2017.10.020.

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ENVIRONMENTALEQUIPMENTSNORTHER. "Fine resolution plotting at high speed." Displays 8, no. 1 (January 1987): 44. http://dx.doi.org/10.1016/0141-9382(87)90012-6.

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Brown, W. M., J. L. Walker, and W. R. Boario. "Sighted automation and fine resolution imaging." IEEE Transactions on Aerospace and Electronic Systems 40, no. 4 (October 2004): 1426–45. http://dx.doi.org/10.1109/taes.2004.1386898.

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Baker, T. C., H. Y. Fadamiro, and A. A. Cosse. "Moth uses fine tuning for odour resolution." Nature 393, no. 6685 (June 1998): 530. http://dx.doi.org/10.1038/31131.

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Kaczmarska, Jo, Valerie Isham, and Christian Onof. "Point process models for fine-resolution rainfall." Hydrological Sciences Journal 59, no. 11 (September 26, 2014): 1972–91. http://dx.doi.org/10.1080/02626667.2014.925558.

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Sobotka, M., J. A. Bonet, and M. Vazquez. "High Resolution Observations of Umbral Fine Structure." International Astronomical Union Colloquium 141 (1993): 20–23. http://dx.doi.org/10.1017/s0252921100028694.

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Mitome, M., Y. Ohshima, M. Itoh, and K. Takayanagi. "High-resolution electron microscopy of fine particles." Microscopy Microanalysis Microstructures 4, no. 2-3 (1993): 297–304. http://dx.doi.org/10.1051/mmm:0199300402-3029700.

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Bindhu, V. M., and B. Narasimhan. "A Spatio-temporal disaggregation method to derive time series of Normalized Difference Vegetation Index and Land Surface Temperature at fine spatial resolution." ISPRS - International Archives of the Photogrammetry, Remote Sensing and Spatial Information Sciences XL-8 (December 23, 2014): 1397–401. http://dx.doi.org/10.5194/isprsarchives-xl-8-1397-2014.

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Estimation of evapotranspiration (ET) from remote sensing based energy balance models have evolved as a promising tool in the field of water resources management. Performance of energy balance models and reliability of ET estimates is decided by the availability of remote sensing data at high spatial and temporal resolutions. However huge tradeoff in the spatial and temporal resolution of satellite images act as major constraints in deriving ET at fine spatial and temporal resolution using remote sensing based energy balance models. Hence a need exists to derive finer resolution data from the available coarse resolution imagery, which could be applied to deliver ET estimates at scales to the range of individual fields. The current study employed a spatio-temporal disaggregation method to derive fine spatial resolution (60 m) images of NDVI by integrating the information in terms of crop phenology derived from time series of MODIS NDVI composites with fine resolution NDVI derived from a single AWiFS data acquired during the season. The disaggregated images of NDVI at fine resolution were used to disaggregate MODIS LST data at 960 m resolution to the scale of Landsat LST data at 60 m resolution. The robustness of the algorithm was verified by comparison of the disaggregated NDVI and LST with concurrent NDVI and LST images derived from Landsat ETM+. The results showed that disaggregated NDVI and LST images compared well with the concurrent NDVI and LST derived from ETM+ at fine resolution with a high Nash Sutcliffe Efficiency and low Root Mean Square Error. The proposed disaggregation method proves promising in generating time series of ET at fine resolution for effective water management.
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Dissertations / Theses on the topic "Fine-resolution"

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Best, Stephen Edward. "Instability processes in a fine resolution Antarctic model." Thesis, University of Southampton, 1995. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.295932.

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Boedeker, Scott. "A fine resolution model of the Leeuwin Current system." Thesis, Monterey, Calif. : Springfield, Va. : Naval Postgraduate School ; Available from National Technical Information Service, 2001. http://handle.dtic.mil/100.2/ADA401599.

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Thesis (M.S. in Meteorology and Physical Oceanography) Naval Postgraduate School, December 2001.
Thesis Advisor(s): Batteen, Mary L. "December 2001." Includes bibliographical references (p. 55-58). Also Available online.
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Amesbury, Matthew John. "Fine-resolution peat-based palaeoclimate records of the late-Holocene." Thesis, University of Southampton, 2008. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.486437.

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The need for peat-based palaeoclimatic studies of increased temporal resolution has been identified in recent research and formed the basis ofthis thesis. Four ombrotrophic bogs were studied along an oceanic to continental climate transect in north-west Europe. Selected late-Holocene abrupt climatic deteriorations were identified at coarse resolution and time-slices over each of these were investigated at 25 nun sample resolution using peat humification, testate amoebae and plant macrofossil analyses. Age-depth models based on radiocarbon dating, tephrochronology and spheroidal carbonaceous particle analysis were applied to each fine-resolution zone. By quantifying the error inherent in the age-depth models, it was confirmed that in the majority of cases, the sampling resolution used equated to sub-decadal resolution. Therefore an assessment ofwhether the fine-resolution results could be confidently interpreted as reflecting sub-decadal palaeoclimatic change was possible. In order to facilitate this approach, novel sampling techniques were developed and changes to standard methodologies applied. A custom-built peat slicer enabled uniform millimetre-scale slicing of frozen peat samples. Sample sizes for each of the three methods of analysis were halved after testing confirmed that this did not effect the interpretation of the palaeoclimatic record derived. It was concluded that the multi-proxy, fine-resolution results could be confidently interpreted as sub-decadal resolution palaeoclimatic data, although careful interpretation was deemed essential since some datasets were problematic in some respects. For example, the extent to.which the individual records co-varied within the fine-resolution zones was variable {nd there was a lack of correspondence between some results from adjacent cores. In addition, a lack of contemporaneity between fineresolution zones of the same event between sites and uncertainty in the absolute dating of the fine-resolution changes meant that the climatological conclusions relating to each abrupt event were limited, although there was evidence of palaeoclimatic changes that occurred over ca. 5 - 20 years, indicating that the events studied may have been more abrupt than suggested in 'previous peat-based research. Fine-resolution humification results were subjected to spectral analysis and exhibited a dominant periodicity of between 8 and 13 years, suggesting a link to the ca. 11 year Schwabe sunspot cycle. In order to maximise potential temporal resolution and produce reliable subdecadal palaeoclimatic data in future research, it was recommended that peat-based studies should obtain the best possible chronological control, focus on sites with high species diversity and rapid accumulation, employ the methodological advancements developed in this thesis and perform replicate coring to assess intra-site differences in microtopography. Site specific factors should be considered above degree of continentality in the selection of sites for future research.
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Singles, Roderick John. "Fine resolution modelling of ammonia dry deposition over Great Britain." Thesis, University of Edinburgh, 1996. http://hdl.handle.net/1842/14431.

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In this study an alternative has been taken, by applying an atmospheric transport model. Due to assumptions in the treatment of vertical dispersion, many current UK models are unable to describe the short-range dispersion of ammonia adequately, so a new statistical model has been created by extensively modifying an existing Lagrangian trajectory model. A number of atmospheric processes have been parameterised for inclusion in the model, and boundary data have been constructed to allow the inclusion of continental emissions. The wind speed data used to advect the model have been optimised for NH3 dry deposition, and careful restructuring of the computer code has reduced computational time considerably. Initial testing of the model on a 20 km x 20 km grid has shown that modelled wet deposition fluxes of sulphate and nitrate have a fair degree of success in reproducing measurement data. Comparisons of SO2 and NO2 surface concentrations with measured data have shown a variable degree of success, highlighting the uncertainties in emission heights. A number of sensitivity tests have been performed on various models processes, and have shown the degree of dependence of certain modelled species on the type of parameterisation used in the model. Emissions data for NH3 have been employed on a much finer horizontal scale of 5 km x 5 km grid squares than has been previously used in an atmospheric transport model over Great Britain. The use of a detailed description of vertical diffusion and dry deposition, together with a fine resolution emissions dataset, have produced the best yet agreement with measured NH3 surface concentration estimates for Great Britain. Total annual fluxes of NH3 dry deposition agree well with official estimates, but the spatial distribution of these data differ considerably, and highlight the possible over-estimation of the NH3 samplers used in the monitoring network in areas of very low surface concentrations. A total annual budget for reduced nitrogen is given which shows the directional-dependence of both total deposition and export of reduced nitrogen. The model estimates that on average over half of the total dry deposition is the result of emissions being dry deposited in the same 5 km grid square. The spatial variation of this fraction is important information which can be used to guide emission reduction strategies.
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English, Luc Thomas Philippe. "High resolution lithostratigraphy of fine grained Llandovery sediments in northern Europe." Thesis, University of Cambridge, 1995. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.361683.

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Grose, Timothy John. "Analysis of theoretical and observational techniques using the fine resolution Antarctic model." Thesis, University of East Anglia, 1992. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.317581.

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Aplin, Paul. "Fine spatial resolution satellite sensor imagery for pre-field land cover classification." Thesis, University of Southampton, 1999. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.297413.

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Bartrand, Timothy A. Haas Charles N. Farouk Bakhtier. "High resolution experimental studies and numerical analysis of fine bubble ozone disinfection contactors /." Philadelphia, Pa. : Drexel University, 2006. http://hdl.handle.net/1860/1214.

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Tuttle, Sam Arthur. "Quantitative modelling of fine scale auroral emissions and electric fields at sub-second resolution." Thesis, University of Southampton, 2017. https://eprints.soton.ac.uk/415860/.

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The structuring and dynamics of auroral emissions at fine spatial and temporal scales, down to tens of metres and fractions of a second, is an oft-observed but poorly understood phenomenon. One particular theory for such fine scale structure involves magnetic reconnection in the auroral acceleration region initiating Alfven waves which structure and energise the precipitating particles. Such theories are testable using measurements of the ionospheric electric fields associated with the observed fine scale structure. This thesis presents attempts to measure ionospheric electric fields, using a novel model that tracks emission from a long-lived ion produced at times of auroral particle precipitation, so that the theories that seek to explain the fine scale structuring of the aurora can be evaluated. However, such modelling requires knowledge of the energy spectrum of the precipitation, and the resulting emissions, at the spatial and temporal resolutions of the observed fine scale aurora. This thesis presents such new work concerning the modelling of auroral electron energy spectra and fine scale auroral emissions at sub-kilometre and sub-second resolutions using ground based observations, and the subsequent application of a novel method to estimate ionospheric electric fields using a long-lived ion produced during times of auroral precipitation. Two novel methods are presented. The first method utilises a fusion of multi-monochromatic auroral observations at optical and near-infrared (NIR) wavelengths together with simultaneous radar observations. The second uses only multimonochromatic observations, to be used when complementary radar observations are unavailable. Each technique is applied to an observed auroral event to determine the energy spectra of the precipitating electrons and resulting 3-D distribution of auroral emissions. Modelled images of the emissions verify the accuracy of the recovered spectra. The recovered spectra are used as input to a novel model which solves the continuity equation of a long-lived ion produced at times of auroral precipitation. This model uses a parameterised ion velocity, and optimises the velocity parameters by comparing observed and modelled images of emission from this ion. A simple velocity parameterisation, a uniform flow perpendicular to the magnetic field, yields plasma velocities of 0.4-2.4 km s-1, with the plasma velocities being enhanced at times when the auroral brightness is high. Comparison of the recovered velocities to radar observations of ionospheric plasma velocities shows agreement in direction, but the recovered velocities are larger, more so when the aurora is brighter. Electric fields, inferred from the modelled plasma velocities, of up to 120 mV m-1 are found at the time when the auroral brightness was intensified. A more complex flow parameterisation is presented and tested, but does not succeed for the event analysed.
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Phillips, Robyn L. "A fine resolution model of the Leeuwin Current System off western and southern Australia." Thesis, Monterey, Calif. : Springfield, Va. : Naval Postgraduate School ; Available from National Technical Information Service, 2002. http://library.nps.navy.mil/uhtbin/hyperion-image/02sep%5FPhillips.pdf.

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Thesis (M.S. in Physical Oceanography)--Naval Postgraduate School, September 2002.
Thesis advisor(s): Mary L. Batteen, Curtis A. Collins. Includes bibliographical references (p. 85-88). Also available online.
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Books on the topic "Fine-resolution"

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Chen, Qi, Tiit Kutser, Antoine Collin, and Timothy A. Warner. Fine Resolution Remote Sensing of Species in Terrestrial and Coastal Ecosystems. London: Routledge, 2021. http://dx.doi.org/10.4324/9781003191193.

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Grose, Timothy John. Analysis of theoretical and observational techniques using the fine resolution Antarctic model. Norwich: University of East Anglia, 1992.

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Niewiadomski, M. The development of a long-range transport model with a nested fine resolution grid. [Toronto, Ont.]: Environment Ontario, 1991.

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Niewiadomski, M. The development of a long-range transport model with a nested fine resolution grid, phase II. [Toronto]: Ontario, Ministry of the Environment, 1993.

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Zsigovics, Gabor. Derivation of biophysical variables from fine resolution imagery for co-processing with socio-economic data in an urban area. Ottawa: National Library of Canada, 2000.

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Inc, Altostratus. Urban surface modification as a potential ozone air-quality improvement strategy in California: Fine-resolution meteorological and photochemical modeling of urban heat islands : PIER final project report. Sacramento, Calif.]: California Energy Commission, 2009.

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Boles, Melanie. DsPIC33CH FRM, High-Resolution PWM with Fine Edge Placement. Microchip Technology Incorporated, 2017.

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A Fine Resolution Model of the Leeuwin Current System. Storming Media, 2001.

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Jiang, Linda. DsPIC33C/PIC24 FRM, High-Resolution PWM with Fine Edge Placement. Microchip Technology Incorporated, 2018.

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Boles, Melanie. DsPIC33/PIC24 FRM, High Resolution PWM with Fine Edge Placement. Microchip Technology Incorporated, 2018.

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Book chapters on the topic "Fine-resolution"

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Überall, Herbert. "Fine Resolution of Radar Targets." In Springer Series on Wave Phenomena, 47–112. Berlin, Heidelberg: Springer Berlin Heidelberg, 1994. http://dx.doi.org/10.1007/978-3-642-85112-4_3.

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Fitzgerald, Kerr, Meng Law, Jarrel Seah, Jennifer Tang, and Bogdan Matuszewski. "Multi-resolution Fine-Tuning of Vision Transformers." In Medical Image Understanding and Analysis, 535–46. Cham: Springer International Publishing, 2022. http://dx.doi.org/10.1007/978-3-031-12053-4_40.

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Kolev, Nikolay Ivanov. "Sources for fine resolution outside the boundary layer." In Multiphase Flow Dynamics 4, 67–88. Berlin, Heidelberg: Springer Berlin Heidelberg, 2011. http://dx.doi.org/10.1007/978-3-642-20749-5_3.

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Kwon, S. M., S. S. Hong, J. L. Weinberg, and N. Y. Misconi. "Fine Resolution Brightness Distribution of the Visible Zodiacal Light." In Origin and Evolution of Interplanetary Dust, 183–86. Dordrecht: Springer Netherlands, 1991. http://dx.doi.org/10.1007/978-94-011-3640-2_37.

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Perktold, Lukas, and Jørgen Christiansen. "Fine-Time Resolution Measurements for High Energy Physics Experiments." In High-Performance AD and DA Converters, IC Design in Scaled Technologies, and Time-Domain Signal Processing, 319–39. Cham: Springer International Publishing, 2014. http://dx.doi.org/10.1007/978-3-319-07938-7_14.

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Zhou, Liguo, Zhongyuan Wang, Shu Wang, and Yimin Luo. "Coarse-to-Fine Image Super-Resolution Using Convolutional Neural Networks." In MultiMedia Modeling, 73–81. Cham: Springer International Publishing, 2018. http://dx.doi.org/10.1007/978-3-319-73600-6_7.

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Ryu, Jaehoon, Mohammed Niyasdeen, and Jeong-Yeol Choi. "Flux Limiting Schemes for Fine Resolution Detonation Wave Cell Structure." In Lecture Notes in Electrical Engineering, 463–71. Singapore: Springer Nature Singapore, 2022. http://dx.doi.org/10.1007/978-981-19-2689-1_35.

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Chen, Qi, Tiit Kutser, Antoine Collin, and Timothy A. Warner. "Introduction: Fine resolution remote sensing of species in terrestrial and coastal ecosystems." In Fine Resolution Remote Sensing of Species in Terrestrial and Coastal Ecosystems, 1–3. London: Routledge, 2021. http://dx.doi.org/10.4324/9781003191193-101.

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Vahtmäe, Ele, Jonne Kotta, Helen Orav-Kotta, Ilmar Kotta, Merli Pärnoja, and Tiit Kutser. "Predicting macroalgal pigments (chlorophyll a, chlorophyll b, chlorophyll a + b, carotenoids) in various environmental conditions using high-resolution hyperspectral spectroradiometers." In Fine Resolution Remote Sensing of Species in Terrestrial and Coastal Ecosystems, 120–42. London: Routledge, 2021. http://dx.doi.org/10.4324/9781003191193-7.

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Wicaksono, Pramaditya, and Wahyu Lazuardi. "Assessment of PlanetScope images for benthic habitat and seagrass species mapping in a complex optically shallow water environment." In Fine Resolution Remote Sensing of Species in Terrestrial and Coastal Ecosystems, 143–69. London: Routledge, 2021. http://dx.doi.org/10.4324/9781003191193-8.

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Conference papers on the topic "Fine-resolution"

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Sun, Brian, Mark Yeary, Hjalti H. Sigmarsson, and Jay W. McDaniel. "Fine Resolution Position Estimation Using Kalman Filtering." In 2019 IEEE International Instrumentation and Measurement Technology Conference (I2MTC). IEEE, 2019. http://dx.doi.org/10.1109/i2mtc.2019.8826857.

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Doerry, Armin W., Vivian D. Gutierrez, and Lars M. Wells. "A portfolio of fine-resolution SAR images." In Defense and Security, edited by Robert Trebits, James L. Kurtz, Roger Appleby, Neil A. Salmon, and David A. Wikner. SPIE, 2004. http://dx.doi.org/10.1117/12.542409.

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Doerry, Armin W. "Bandwidth requirements for fine-resolution squinted SAR." In AeroSense 2000, edited by Robert Trebits and James L. Kurtz. SPIE, 2000. http://dx.doi.org/10.1117/12.391840.

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Silverman, Ronald H., Fanting Kong, Harriet O. Lloyd, and Y. C. Chen. "Fine-resolution photoacoustic imaging of the eye." In BiOS, edited by Alexander A. Oraevsky and Lihong V. Wang. SPIE, 2010. http://dx.doi.org/10.1117/12.842471.

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Zu, W., and Xi-Jia Gu. "Amplified piezoelectric actuator with fine linear resolution." In Photonics North, edited by John C. Armitage, Simon Fafard, Roger A. Lessard, and George A. Lampropoulos. SPIE, 2004. http://dx.doi.org/10.1117/12.566423.

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Rudnick, Roy, Leonid Pascar, Boris Frenkel, and Dan M. Marom. "Polarization Diverse Fine Resolution Photonic Spectral Processor." In Optical Fiber Communication Conference. Washington, D.C.: OSA, 2016. http://dx.doi.org/10.1364/ofc.2016.w1e.4.

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Bilki, Burak, Benjamin Freund, and Jose Repond. "Calorimetric measurements with extremely fine spatial resolution." In 2016 IEEE Nuclear Science Symposium, Medical Imaging Conference and Room-Temperature Semiconductor Detector Workshop (NSS/MIC/RTSD). IEEE, 2016. http://dx.doi.org/10.1109/nssmic.2016.8069875.

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Wallin, S., D. A. Reyes, and Sharath S. Girimaji. "Bridging between coarse and fine resolution in variable resolution turbulence computations." In THMT-12. Proceedings of the Seventh International Symposium On Turbulence, Heat and Mass Transfer Palermo, Italy, 24-27 September, 2012. Connecticut: Begellhouse, 2012. http://dx.doi.org/10.1615/ichmt.2012.procsevintsympturbheattransfpal.1210.

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Li, Xin-Zen. "A new technique for fine spatial resolution BOTDA." In Fourteenth International Conference on Optical Fiber Sensors, edited by A. G. Mignani and H. C. Lefèvre. SPIE, 2000. http://dx.doi.org/10.1117/12.2302291.

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Li, Yang, Bitao Jiang, Yao Lu, and Li Shen. "Fine-grained Adversarial Image Inpainting with Super Resolution." In 2019 International Joint Conference on Neural Networks (IJCNN). IEEE, 2019. http://dx.doi.org/10.1109/ijcnn.2019.8852241.

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Reports on the topic "Fine-resolution"

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McClean, Julie L. Towards a Fine-Resolution Global Coupled Climate System for Prediction on Decadal/Centennial Scales. Office of Scientific and Technical Information (OSTI), November 2013. http://dx.doi.org/10.2172/1105025.

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Chassignet, Eric, and Dmitry Dukhovskoy. Ocean and Sea Ice and their Interactions around Greenland and the West Antarctic Peninsula in Forced Fine-Resolution Global Simulations. Office of Scientific and Technical Information (OSTI), March 2019. http://dx.doi.org/10.2172/1498055.

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McClean, Julie L., Sarah T. Gille, Eric P. Chassignet, and Mathew E. Maltrud. Ocean and Sea Ice and their Interactions around Greenland and the West Antarctic Peninsula in Forced Fine-Resolution Global Simulations. Office of Scientific and Technical Information (OSTI), October 2019. http://dx.doi.org/10.2172/1572201.

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Fritts, D. C. Turbulence Fine Structure, Intermittency, and Large-Scale Interactions in the Stable Boundary Layer and Residual Layer: Correlative High-Resolution Measurements andDirect Numerical Simulations. Fort Belvoir, VA: Defense Technical Information Center, April 2012. http://dx.doi.org/10.21236/ada606059.

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Fritts, David C., Ben B. Balsley, and Dale A. Lawrence. Turbulence Fine Structure, Intermittency, and Large-Scale Interactions in the Stable Boundary Layer and Residual Layer: Correlative High-Resolution Measurements and Direct Numerical Simulations. Fort Belvoir, VA: Defense Technical Information Center, November 2014. http://dx.doi.org/10.21236/ada627247.

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Huff, Welcome Rex Anthony. Development of a high-resolution soft x-ray (30--1500 eV) beamline at the Advanced Light Source and its use for the study of angle-resolved photoemission extended fine structure. Office of Scientific and Technical Information (OSTI), February 1996. http://dx.doi.org/10.2172/211573.

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Blundell, S. Micro-terrain and canopy feature extraction by breakline and differencing analysis of gridded elevation models : identifying terrain model discontinuities with application to off-road mobility modeling. Engineer Research and Development Center (U.S.), April 2021. http://dx.doi.org/10.21079/11681/40185.

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Elevation models derived from high-resolution airborne lidar scanners provide an added dimension for identification and extraction of micro-terrain features characterized by topographic discontinuities or breaklines. Gridded digital surface models created from first-return lidar pulses are often combined with lidar-derived bare-earth models to extract vegetation features by model differencing. However, vegetative canopy can also be extracted from the digital surface model alone through breakline analysis by taking advantage of the fine-scale changes in slope that are detectable in high-resolution elevation models of canopy. The identification and mapping of canopy cover and micro-terrain features in areas of sparse vegetation is demonstrated with an elevation model for a region of western Montana, using algorithms for breaklines, elevation differencing, slope, terrain ruggedness, and breakline gradient direction. These algorithms were created at the U.S. Army Engineer Research Center – Geospatial Research Laboratory (ERDC-GRL) and can be accessed through an in-house tool constructed in the ENVI/IDL environment. After breakline processing, products from these algorithms are brought into a Geographic Information System as analytical layers and applied to a mobility routing model, demonstrating the effect of breaklines as obstacles in the calculation of optimal, off-road routes. Elevation model breakline analysis can serve as significant added value to micro-terrain feature and canopy mapping, obstacle identification, and route planning.
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Zamir, Dani, Steven Tanksley, and Robert Fluhr. Cloning a Fusarium Resistance Gene in Tomato Based on Knowledge of its Map Position. United States Department of Agriculture, July 1995. http://dx.doi.org/10.32747/1995.7604934.bard.

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The objectives of this project were to develop the tools and methodologies for positional cloning of genes in tomato and apply them for the cloning a Fusarium resistance gene - I2.. The feasibility of positional cloning of disease resistance genes was demonstrated for Pto which confers resistance to pseudomonas (Martin et al. 1993). The Fusarium resistance gene was mapped genetically and physically and was found to be in close proximity to TG 105 (Segal et al. 1992). To obtain fine mapping of gene I2, and additional target genes in future projects, a high density linkage map was developed (Tanksley et al. 1992; Broun and Tanksley 1993). In addition two permanent mapping populations were constructed: a recombinant inbred (Paran et al. 1995; Zamir et al. 1993) and an introgression line population (Eshed et al. 1992; Eshed and Zamir 1994). Using these resources we determined that the I2 locus shows complete co-segregation, down to a resolution of a few Kb, with SL8 which shows architectural similarity with other plant resistance genes. Transformation and complementation analysis is in progress (Ori et al. in preparation).
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9

Furman, Alex, Jan Hopmans, Shmuel Assouline, Jirka Simunek, and Jim Richards. Soil Environmental Effects on Root Growth and Uptake Dynamics for Irrigated Systems. United States Department of Agriculture, February 2011. http://dx.doi.org/10.32747/2011.7592118.bard.

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Root water uptake is perhaps the most important unknown in the mass balance of hydrological and agricultural systems. The understanding and the ability to predict root uptake and the way it is influence by environmental conditions has great potential in increasing water and fertilizer use efficiency and allowing better control of water and contaminant leach towards groundwater. This BARD supported research is composed of several components, including a) intensive laboratory work for the quantification of root uptake and the way it is controlled by environmental conditions; b) development of tools for laboratory and field use that can help in sensing very low water fluxes and water content, which is a necessity for studying root uptake; c) development of capabilities to model compensated root uptake; and d) development of a database that will allow calibration of such a model. In addition some auxiliary research was performed as reported later. Some of the components, and especially the modeling and the HPP development, were completed in the framework of the project and even published in the international literature. The completed components provide a modeling environment that allows testing root compensated uptake modeling, a tool that is extremely important for true mechanistic understanding of root uptake and irrigation design that is based on mechanistic and not partially based myth. The new button HPP provides extended level of utilization of this important tool. As discussed below, other components did not get to maturity stage during the period of the project, but comprehensive datasets were collected and will be analyzed in the near future. A comprehensive dataset of high temporal and spatial resolution water contents for two different setups was recorded and should allow us understanding f the uptake at these fine resolutions. Additional important information about root growth dynamics and its dependence in environmental conditions was achieved in both Israel and the US. Overall, this BARD supported project provided insight on many important phenomena related to root uptake and to high resolution monitoring in the vadose zone. Although perhaps not to the level that we initially hoped for, we achieved better understanding of the related processes, better modeling capabilities, and better datasets that will allow continuation of this effort in the near future.
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10

Medrano, Juan, Adam Friedmann, Moshe (Morris) Soller, Ehud Lipkin, and Abraham Korol. High resolution linkage disequilibrium mapping of QTL affecting milk production traits in Israel Holstein dairy cattle. United States Department of Agriculture, March 2008. http://dx.doi.org/10.32747/2008.7696509.bard.

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Original objectives: To create BAC contigs covering two QTL containing chromosomal regions (QTLR) and obtain BAC end sequence information as a platform for SNP identification. Use the SNPs to search for marker-QTL linkage disequilibrium (LD) in the test populations (US and Israel Holstein cattle). Identify candidate genes, test for association with dairy cattle production and functional traits, and confirm any associations in a secondary test population. Revisions in the course of the project: The selective recombinant genotyping (SRG) methodology which we implemented to provide moderate resolution QTL mapping turned out to be less effective than expected, due to problems introduced by incomplete marker informativity. This required a no-cost one-year extension of the project. Aside from this, the project was implemented essentially as envisaged, but only with respect to a single QTLR and single population association-test. Background to the topic. Dairy cattle breeders are looking to marker-assisted selection (MAS) as a means of identifying genetically superior sires and dams. MAS based on population-wide LD can be many times more effective than MAS based on within-family linkage mapping. In this proposal we developed a protocol leading from family based QTL mapping to population-wide LD between markers and the QTL Major conclusions, solutions, achievements. The critical importance of marker informativity for application of the SRG design in outcrossing random mating populations was identified, and an alternative Fractioned Pool Design (FPD) based on selective DNA pooling was developed. We demonstrated the feasibility of constructing a BAC contig across a targeted chromosomal region flanking the marker RM188 on bovine chromosome BTA4, which was shown in previous work to contain a QTL affecting milk production traits. BAC end sequences were obtained and successfully screened for SNPs. LD studies of these SNPs in the Israel population, and of an independent set of SNPs taken across the entire proximal region of BTA4 in the USA population, showed a much lower degree of LD than previously reported in the literature. Only at distances in the sub-cM level did an appreciable fraction of SNP marker-pairs show levels of LD useful for MAS. In contrast, studies in the Israel population using microsatellite markers, presented an equivalent degree of LD at a 1-5 separation distance. SNP LD appeared to reflect historical population size of Bostaurus (Ne=5000- 10,000), while microsatellite LD appeared to be in proportion to more recent effective population size of the Holstein breed (Ne=50-100). An appreciable fraction of the observed LD was due to Family admixture structure of the Holstein population. The SNPs MEOX2/IF2G (found within the gene SETMAR at 23,000 bp from RM188) and SNP23 were significantly associated with PTA protein, Cheese dollars and Net Merit Protein in the Davis bull resource population, and were also associated with protein and casein percentages in the Davis cow resource population. Implications. These studies document a major difference in degree of LD presented by SNPs as compared to microsatellites, and raise questions as to the source of this difference and its implications for QTL mapping and MAS. The study lends significant support to the targeted approach to fine map a previously identified QTL. Using high density genotyping with SNP discovered in flanking genes to the QTL, we have identified important markers associated with milk protein percentage that can be tested in markers assisted selection programs.
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