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Academic literature on the topic 'FANTOM5'

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Published: 11 March 2023

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Journal articles on the topic "FANTOM5"

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Abugessaisa, Imad, Jordan A. Ramilowski, Marina Lizio, Jesicca Severin, Akira Hasegawa, Jayson Harshbarger, Atsushi Kondo, et al. "FANTOM enters 20th year: expansion of transcriptomic atlases and functional annotation of non-coding RNAs." Nucleic Acids Research 49, no. D1 (November 19, 2020): D892—D898. http://dx.doi.org/10.1093/nar/gkaa1054.

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Abstract The Functional ANnoTation Of the Mammalian genome (FANTOM) Consortium has continued to provide extensive resources in the pursuit of understanding the transcriptome, and transcriptional regulation, of mammalian genomes for the last 20 years. To share these resources with the research community, the FANTOM web-interfaces and databases are being regularly updated, enhanced and expanded with new data types. In recent years, the FANTOM Consortium's efforts have been mainly focused on creating new non-coding RNA datasets and resources. The existing FANTOM5 human and mouse miRNA atlas was supplemented with rat, dog, and chicken datasets. The sixth (latest) edition of the FANTOM project was launched to assess the function of human long non-coding RNAs (lncRNAs). From its creation until 2020, FANTOM6 has contributed to the research community a large dataset generated from the knock-down of 285 lncRNAs in human dermal fibroblasts; this is followed with extensive expression profiling and cellular phenotyping. Other updates to the FANTOM resource includes the reprocessing of the miRNA and promoter atlases of human, mouse and chicken with the latest reference genome assemblies. To facilitate the use and accessibility of all above resources we further enhanced FANTOM data viewers and web interfaces. The updated FANTOM web resource is publicly available at https://fantom.gsc.riken.jp/.
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Mojarad, Musa, Fariba Sarhangnia, Amin Rezaeipanah, Hamin Parvin, and Samad Nejatian. "Modeling Hereditary Disease Behavior Using an Innovative Similarity Criterion and Ensemble Clustering." Current Bioinformatics 16, no. 5 (August 11, 2021): 749–64. http://dx.doi.org/10.2174/1574893616999210128175715.

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Background: Today, there are various theories about the causes of hereditary diseases, but doctors believe that both genetic and environmental factors play an essential role in the incidence and spread of these diseases. Objective: In order to identify genes that are cause the disease, inter-cell or inter-tissue communications must be determined. The inter-cells or inter-tissues interaction could be illustrated by applying the gene expression. The disorders that have led to widespread changes could be identified by investigating gene expression information. Methods: In this paper, identifying inter-cell and inter-tissue communications for various diseases has been accomplished utilizing an innovative similarity criterion of the graph topological structure characteristics and an extended clustering ensemble. The proposed method is performed in two stages: first, several clustering models have been combined to detect initial inter-cell or inter-tissue communications and produce better results than singular algorithms. Second, the cell-to-cell or tissue-totissue similarity in each cluster is identified through a similarity criterion based on the graph topological structure. Results: The evaluation of the proposed method has been carried out, benefiting the UCI and FANTOM5 datasets. The results of experiments over FANTOM5 dataset report that the Silhouette coefficient equals 0.901 in 18 clusters for cells and equal to 0.762 in 13 clusters for tissues. Conclusion: The maximum inter-cells or inter-tissues similarity in each cluster can be exploited to detect the relationships between diseases.
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Chang, Yu-Ling, Krishna Sriram, Zhenping Wang, Satomi Igawa, Chia-Chi Wu, Paul Insel, and Anna Di Nardo. "Dermal Fibroblasts Control Mast Cell reactivity to commensal bacteria." Journal of Immunology 202, no. 1_Supplement (May 1, 2019): 122.15. http://dx.doi.org/10.4049/jimmunol.202.supp.122.15.

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Abstract Background Our data suggests, and current literature supports, that when mast cells (MCs) leave the blood and interact with dermal fibroblasts (DFs), they assume a bacterial tolerant phenotype in order to prevent unnecessary inflammation during the encounter with the beneficial commensal microbiome. We hypothesize that the mechanisms that induce the MC tolerant phenotype in human skin is due to dermal fibroblasts interactions. Methods We mimicked the “in vivo” setting by conditioning human cord blood MC (hMC) with human dermal fibroblast (hDF) and, then exposed them to commensal bacteria supernatant. Human MC transcriptome data from the RNA-seq FANTOM5 data collection on MCs freshly isolated from human skin (FANTOM5 study Motakis_et_al_2013) was used to investigate the innate immune phenotype of MCs in the skin. We determined the genes that make hDFs unique by comparing their gene expression profiles with lung and cardiac fibroblasts using RNA-seq analysis and challenged hMCs with the products of these genes. Results We have discovered that hDF conditioned with hMCs, show a decreased expression of interleukins upon commensal stimulation; specifically, multiple cytokines/chemokine such as pro-inflammatory cytokine GM-SCF, IL-8, MCP-1 and anti-inflammatory cytokines IL-10, IL-13 are down-regulated by at least 95% and these cytokines can be controlled by the product of hDF unique genes. Conclusion The human dermal MC reactivity is controlled by hDF’s unique genes that play an important role in regulating the hMC NF-Kb pathway.
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Abugessaisa, Imad, Hisashi Shimoji, Serkan Sahin, Atsushi Kondo, Jayson Harshbarger, Marina Lizio, Yoshihide Hayashizaki, et al. "FANTOM5 transcriptome catalog of cellular states based on Semantic MediaWiki." Database 2016 (2016): baw105. http://dx.doi.org/10.1093/database/baw105.

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良子, 藤川. "FANTOM5データを誰でも活用できる形に." Nature Digest 14, no. 12 (December 2017): 24–27. http://dx.doi.org/10.1038/ndigest.2017.171224.

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Kolmykov, Semyon, Ivan Yevshin, Mikhail Kulyashov, Ruslan Sharipov, Yury Kondrakhin, Vsevolod J. Makeev, Ivan V. Kulakovskiy, Alexander Kel, and Fedor Kolpakov. "GTRD: an integrated view of transcription regulation." Nucleic Acids Research 49, no. D1 (November 24, 2020): D104—D111. http://dx.doi.org/10.1093/nar/gkaa1057.

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Abstract The Gene Transcription Regulation Database (GTRD; http://gtrd.biouml.org/) contains uniformly annotated and processed NGS data related to gene transcription regulation: ChIP-seq, ChIP-exo, DNase-seq, MNase-seq, ATAC-seq and RNA-seq. With the latest release, the database has reached a new level of data integration. All cell types (cell lines and tissues) presented in the GTRD were arranged into a dictionary and linked with different ontologies (BRENDA, Cell Ontology, Uberon, Cellosaurus and Experimental Factor Ontology) and with related experiments in specialized databases on transcription regulation (FANTOM5, ENCODE and GTEx). The updated version of the GTRD provides an integrated view of transcription regulation through a dedicated web interface with advanced browsing and search capabilities, an integrated genome browser, and table reports by cell types, transcription factors, and genes of interest.
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Sharipov, Ruslan N., Yury V. Kondrakhin, Anna S. Ryabova, Ivan S. Yevshin, and Fedor A. Kolpakov. "Assessment of transcriptional importance of cell line-specific features based on GTRD and FANTOM5 data." PLOS ONE 15, no. 12 (December 21, 2020): e0243332. http://dx.doi.org/10.1371/journal.pone.0243332.

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Creating a complete picture of the regulation of transcription seems to be an urgent task of modern biology. Regulation of transcription is a complex process carried out by transcription factors (TFs) and auxiliary proteins. Over the past decade, ChIP-Seq has become the most common experimental technology studying genome-wide interactions between TFs and DNA. We assessed the transcriptional significance of cell line-specific features using regression analysis of ChIP-Seq datasets from the GTRD database and transcriptional start site (TSS) activities from the FANTOM5 expression atlas. For this purpose, we initially generated a large number of features that were defined as the presence or absence of TFs in different promoter regions around TSSs. Using feature selection and regression analysis, we identified sets of the most important TFs that affect expression activity of TSSs in human cell lines such as HepG2, K562 and HEK293. We demonstrated that some TFs can be classified as repressors and activators depending on their location relative to TSS.
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Kyi-Tha-Thu, Chaw, and Toshihiro Takizawa. "Long non-coding RNA expression analysis during mouse testis development using the FANTOM5 data." Journal of Reproductive Immunology 130 (November 2018): 40. http://dx.doi.org/10.1016/j.jri.2018.09.029.

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Wang, Junxiao, Shan-Shun Luo, and Toshihiro Takizawa. "In silico analysis of lncRNA expression in the mouse placenta using the FANTOM5 database." Journal of Reproductive Immunology 130 (November 2018): 42. http://dx.doi.org/10.1016/j.jri.2018.09.035.

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Santos, Thallis Alves, Aline Ragonezi, Marcio Tokarski, and Bruna Biazotto. "Comissionamento do sistema de planejamento para uso de correção de heterogeneidades: Construção de um fantoma de baixo custo para validação e controle de qualidade em radioterapia." Revista Brasileira de Física Médica 11, no. 3 (November 4, 2018): 13. http://dx.doi.org/10.29384/rbfm.2017.v11.n3.p13.

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A implementação de correções por heterogeneidades no sistema de planejamento de tratamentos radioterápicos melhora a exatidão do cálculo de dose em pacientes submetidos a teleterapia. Estudos mostram que planejamentos sem levar em conta a correção de heterogeneidade podem produzir um subdosagem de até 20% para tumores de pulmão na entrega de dose. Para a validação é necessário adquirir um dos fantomas disponíveis comercialmente. Esses Fantomas permitem a realização dos testes recomendados pelo TRS-430 (Commissioning and Quality Assurance of Computerized Planning Systems for Radiation Treatment of Cancer) e implementação das correções de heterogeneidades. Esse trabalho visa comparar os fantomas disponíveis comercialmente e fazer a análise para construção de um próprio fantoma para validação de forma a cobrir os requisitos necessários
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Dissertations / Theses on the topic "FANTOM5"

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Bussadori, Giulio. "Mesothelial Signature in Mesenchymal Stem/Stromal cells derived from HighGrade Serous Ovarian Cancer marks their Identity." Doctoral thesis, Università degli studi di Trieste, 2015. http://hdl.handle.net/10077/11100.

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2011/2012
Mesenchymal Stem/Stromal Cells (MSCs) are the precursors of various cell types that compose both normal and cancer tissue microenvironments. In order to support the widely diversified parenchymal cells and tissue organization, MSCs are characterized by a large degree of heterogeneity, although available analyses of molecular and transcriptional data do not provide clear evidence. Moreover a wealth of studies has demonstrated a significant role of the microenvironment and MSCs in tumor growth. In the course of the years MSCs were isolated by different groups from different tissues, both healthy and cancerous. The laboratory in which I conducted my PhD project was able to purify MSCs from different healthy tissues (N-MSCs) and, using an adapted protocol, from High-Grade Serous Ovarian Carcinomas (HG-SOC-MSCs). It was possible to shown that these cells do not possess gross chromosomal aberrations and are not tumorigenic in vivo. To better characterize these cells, an integrative bioinformatics analysis was conducted using the deep-CAGE-derived expression profiles obtained from HG-SOC-MSCs, N-MSCs and the FANTOM5 large comprehensive primary cells and tissues dataset. When compared to the other cells and tissues, HG-SOC-MSCs showed a correlation with mesothelial cells and cells hypothesized to have a mesothelial origin, such as smooth muscle cells and fibroblasts. It is known that mesothelial cells in culture can alternate between epithelioid and fibroblastoid morphologies and express high levels of either keratin or vimentin or both depending on their state of growth and the presence of EGF. When cultivated in the absence of EGF, which is known to induce a morphological switch in mesothelial cells, HG-SOC-MSCs switch from a fibroblast-like to an epithelial-like shape. N-MSCs in the same culture conditions, instead, do not change morphology. Moreover, in absence of EGF, HG-SOC-MSCs but not N-MSCs raise the levels of Keratin 7 both in protein and in mRNA. Starting from the list of up-regulated genes in HG-SOC-MSCs compared to N-MSCs a list of mesothelial-related genes was generated. This mesothelial-related gene list was compared to high-throughput gene expression datasets of MSCs derived from other tissues. Such analysis revealed that the mesothelial-related signature is specific to HG-SOC-MSCs. Moreover, Kaplan-Meier survival analysis conducted on a comprehensive SOC microarray dataset showed that patients with higher levels of the mesothelial-related gene signature displayed shorter progression-free survival time. Such correlation was rather specific for HG-SOC given that its performance was either statistically non-significant in the case of lung cancer or correlated with good prognosis in the case of breast cancer. Altogether, the study allowed us to assign a specific identity for MSCs derived from high-grade serous ovarian cancer. We demonstrated a cell-type specific transcriptional activity associated with HG-SOC-MSCs, which identifies them compared to N-MSCs from other districts and position them close to primary mesothelial and mesothelail-derived cells within the FANTOM5 dataset.
XXV Ciclo
1985
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Ciani, Yari. "Regulatory modules discovery and mesenchymal stem cells characterization from high-throughput cancer genomics data." Doctoral thesis, Università degli studi di Trieste, 2015. http://hdl.handle.net/10077/11111.

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2013/2014
Il tumore è una malattia caratterizzata da un’estrema complessità molecolare. Gli approcci di tipo “omic”, collezionando dati sull’intero genoma, sui trascritti e proteine in dataset pubblici, permettono di superare questa complessità e di trovare moduli funzionali che eseguono le funzioni coinvolte nei processi tumorali. Ad esempio, i profili di espressione genica da tessuti vengono usati per definire firme di geni e testarne la rilevanza clinica. Ho usato questo tipo di informazione per caratterizzare specifici geni di interesse in modelli di tumore al seno. Uno dei più recenti progetti di tipo “omic” è il FANTOM5. Questo progetto ha generato una risorsa unica: il primo atlante di espressione in mammifero basato su sequenziamento a singola molecola. Il sistema CAGE (Cap Analysis of Gene Expression) è stato usato per misurare i siti di inizio trascrizione (TSS) e l’utilizzo dei promotori in una collezione di campioni umani: in questo modo sono stati misurati i livelli di espressione di gran parte dei trascritti codificanti e non-codificanti nel genoma umano. Ho usato questo tipo di informazione per caratterizzare una linea staminale mesenchimale/stromale (MSC) derivante da tumori sierosi ovarici di alto grado (HG-SOC-MSCs) o da tessuti normali (N-MSCs) inclusi nel dataset FANTOM5. Ho messo in luce programmi funzionali condivisi tra le due linee cellulari e osservato che le differenze principali tra le funzioni attivate nelle due linee sono di tipo quantitativo più che qualitativo. I risultati suggeriscono inoltre che le HG-SOC-MSCs sono simili alle cellule mesoteliali e alle cellule del tessuto muscolare liscio. Inoltre, ho analizzato l’intero dataset usando ScanAll, un nuovo software utile a predire ab initio la presenza di elementi arricchiti nelle regioni geniche che circondano i promotori trovati del progetto FANTOM5. Ho individuato moduli di regolazione, ossia gruppi di motif che si trovano a distanze predefinite sul genoma uno rispetto all’altro. Questi moduli sono arricchiti in regioni del genoma co-espresse rispetto a sequenze generate casualmente. Infine ho creato un compendio di fattori di trascrizione espressi e che partecipano ad interazione proteina-proteina.
Cancer is a disease characterized by an extreme molecular complexity. Omics approaches, collecting data in public databases for all the genome, transcripts and proteins, attempt to overcome this complexity and find the functional modules that perform the functions involved in tumour related processes. For instance, cancer tissues gene expression profiles are widely used to define genes signatures and test their clinical relevance. I used this kind information in order to characterise interesting genes in breast cancer models. On the other hand, cellular models datasets could provide data that permits to focus on specific molecular mechanisms and probe the effects of molecules in a specific cancer model. One of the most recent omics project is the FANTOM5 project, that has generated a unique resource, the first single molecule sequencing-based expression atlas in mammalian systems. Cap analysis of gene expression (CAGE) was used to measure transcription start sites (TSS) and promoter usage across a wide collection of human samples thereby identifying and measuring levels of the majority of coding and non-coding transcripts in the human genome. I used this information to characterize a mesenchymal/stromal stem cell line (MSC) derived from high-grade serous ovarian cancer (HG-SOC-MSCs) or derived from normal tissue (N-MSCs) included in the entire FANTOM5 human dataset. I highlighted shared functional programs between HG-SOC-MSCs and N-MSCs suggesting that the global differences between the two cell lines are based on quantitative levels of transcriptional output rather than on qualitative differences. The results suggested that HG-SOC-MSCs are close relatives of mesothelial cells and smooth muscle cells. Furthermore, we analysed the entire dataset using ScanAll, a newly developed software, to ab initio predict the presence of enriched elements in the genomic regions surrounding FANTOM5 promoters. I pinpointed regulatory modules, i.e. groups of enriched motifs co-occurring in co-expressed regions within a fixed distance. These modules are enriched in the co-expressed sequences in each sample respect to random generated sequences. Finally, I created a Compendium of putative expressed and directly interacting transcription factors.
XXVII Ciclo
1986
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Fabík, Vojtěch. "Fantomy pro oftalmologický ultrazvukový systém." Master's thesis, Vysoké učení technické v Brně. Fakulta elektrotechniky a komunikačních technologií, 2013. http://www.nusl.cz/ntk/nusl-220047.

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In our work we have studied the ultrasonic imaging systems and their use in ophthalmology, especially with the device Nidek 4000. We described ophthalmological examination methods. In addition, we are using the simulation program Field II. It simulated eye phantom and created his B-scan and biometry, where we compared the effects of different central frequency ultrasonic probes and different speeds of sound in the resulting values. We also created phantoms using agarose gel and materials of different properties. On phantoms, we studied the effect of the velocity of ultrasound in measurement results, effect of the concentration of the agarose gel to the velocity of sound. And we created phantoms simulating the human eye. Measurement protocol was created for use in teaching.
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Haapalahti, M. (Mikael). "Haastavatko simulaattorit perinteisen fantom-harjoittelun?" University of Oulu, 2016. http://urn.fi/URN:NBN:fi:oulu-201609102764.

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Fantom-harjoittelu on ollut pitkään perinteinen harjoittelumenetelmä, jonka avulla hammaslääketieteen opiskelijat ovat harjoitelleet tarvittavia kliinisiä taitoja ennen potilastyöharjoitteluun siirtymistä. Fantom-harjoittelun rinnalle on kehitetty erilaisia tietotekniikkaa hyödyntäviä potilassimulaattoreita, joiden tarkoituksena on tarjota uudenlaisia oppimistapoja. Tässä työssä käsitellään simulaatio-ohjelmistojen käyttöä hammaslääkärikoulutuksessa sekä hammaslääketieteen 3.vuosikurssille kariologian ja parodontologian fantom-harjoitteluiden jälkeen tehtyä kyselyä ja sen tuloksia. Kyselyssä kartoitettiin, minkälaiset asiat opiskelijat kokivat ongelmallisiksi fantom-harjoittelussa ja niiden perusteella pohditaan, voisiko simulaatio-harjoittelu auttaa opiskelijoita oppimaan paremmin. Pääosa kyselyyn vastanneista opiskelijoista koki olevansa valmis hoitamaan potilasta kariologian ja parodontologian fantom-harjoitteluiden jälkeen. Kyselyssä tuli ilmi, että moni opiskelija koki fantom-harjoittelussa oppimista haittaavana tekijänä opettajaresurssien vähäisyyden. Simulaatioharjoittelulla voitaisiin mahdollisesti suunnata opettajaresursseja tehokkaammin ja siten parantaa opiskelijoiden oppimista.
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Hjelm, Sandqvist Carl. "Fantomen: Från ungkarl till hemmaman : Genuskonstruktioner i äventyrsserien Fantomen av Lee Falk." Thesis, Södertörns högskola, Institutionen för kultur och lärande, 2013. http://urn.kb.se/resolve?urn=urn:nbn:se:sh:diva-22473.

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In this essay I analyse the constructions of gender in the series The Phantom by Lee Falk. I apply David Tjeders readings of the bourgouise masculinity, its sensitive character and great risk of falling into unmanliness, when discussing The Phantom’s masculine development. I have analysed three adventures of The Phantom from the years 1937, 1977 and 1996, all authored by original creator Lee Falk. I argue that The Phantom increases his use of violence, therefore risking a loss of character. The stories re-establishes his masculinity by portraying the villains more monstrously. My thesis is that The Phantom's need  to maintain a bourgeouis masculinity ceases as the popular culture has developed new masculine ideals.
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Silva, Lia Gisela Oliveira. "Construção de um PET didáctico: construção de um fantoma." Master's thesis, Faculdade de Ciências e Tecnologia, 2010. http://hdl.handle.net/10362/4978.

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Dissertação apresentada na Faculdade de Ciências e Tecnologia da Universidade Nova de Lisboa para obtenção do grau de Mestre em Engenharia Biomédica
A tomografia por emissão de positrões (PET) é um método de diagnóstico que fornece imagens funcionais do corpo humano. A imagem é formada a partir da distribuição espacial de um radionuclídeo, emissor de positrões, administrado no paciente (1). A interacção entre o positrão com um electrão liberta dois fotões gama coincidentes e anticolineares com uma energia de 511 KeV, detectados por dois detectores. Para o desenvolvimento apropriado de um PET didáctico, é necessário realizar testes num fantoma que substitua vários componentes do corpo humano, para colocação de fontes emissoras de positrões. Foram estudados diferentes materiais, nomeadamente resinas, plásticos e géis, considerando as propriedades físicas e químicas, o orçamento do material e a facilidade de localização do mesmo. Para uma melhor selecção,efectuaram-se simulações através do Penelope, método de Monte Carlo. Optou-se por produzir o fantoma a partir de uma resina de poliéster,onde se colocou o radioisótopo, e de um gel, PAGAT. Após a manufactura foram comparados os resultados experimentais com as simulações efectuadas e medidas as coincidências através de um sistema de detecção.
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Kim, Seonja. ""L'image fantôme" chez Hervé Guibert." Paris 12, 2004. https://athena.u-pec.fr/primo-explore/search?query=any,exact,990003948580204611&vid=upec.

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Nous avons étudié le concept de " l'image fantôme " dans les oeuvres littéraires et photographiques d'Hervé Guibert, journaliste, écrivain et photographe français (1959-1991). Notre objectif a été de montrer que l'image fantôme, qui est. Selon l'auteur, une représentation mentale et littéraire, apparaît aussi dans ses photographies. Nous avons décrit l'image fantôme comme un support de mémoire, rendant visible une photographie pourtant non réalisée. L'image fantôme se situe par conséquent entre deux systèmes de représentations parallèles, le littéraire et le photographique. C'est ce qui nous a conduite à 1'exploration de l'oeuvre photographique de Guibert où nous avons observé le dédoublement narcissique de l'auteur en le reliant à l'image du fantôme. Pour comprendre ces oeuvres, où Guibert semble réussir à représenter l'invisible, nous les avons interprétées ici sous la catégorie du sublime métaphysique. A la recherche d'un au-delà, Guibert semble se transformer lui-même en une image fantôme
We studied the concept of the "ghost image" in literary and photographic works of Hervé Guibert, a French journalist, writer and photographer (1955-1991). Our objective was to show that the ghost image, which is, according to the writer, a mental et literary representation, appears also in his photographies. We descrihed the ghost image as a backup of memory, making visible a photography however flot realized. The ghost image is situated in consequence hctween two systems of parallel representations, the literay and the photographic. It is what led us to the exploration of Guibert's photographie works where we observed the auhor's narcissistic split personality linking it to the image of the ghost. For the best comprehension of these works, where Guibert seems to succeed in representing the invisible, we interpreted them here under the category of the metaphysical sublime. In pursuit of a hereafter, Guibert seems to be transformed into a ghost image
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Lipoubou, Lambert. "Le fantôme dans la machine." Montpellier 3, 2005. http://www.theses.fr/2005MON30058.

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Cette thèse s'inscrit dans une analyse sociologique de récits de science-fiction centrée autour de l'imaginaire de la machine pensante et des héros cybernétiques avec deux exemples principaux, les films japonais et américain. La thèse a pour objet le fantôme du sujet dans la machine. Avec une attitude herméneutique pour mieux saisir les récits cyberpunks, il s'agit d'analyser les relations intersubjectives entre ces machines sujets et les Hommes dans les sociétés fictives. Ce travail fait ressortir les postures de l'identité des sujets androïdes en tant que projections culturellement déterminées. L'auteur a la double conviction que ce devenir-sujet met en avant la force propulsive, " le vers où ", et les différentes possibilités ou les manières d'atteindre ce " vers où ". Ainsi, ce mouvement met en lumière non seulement la création artificielle de la vie mais également la dimension future d'un Homo cybernecus, avec ses prothèses et ses implants cybernétiques
This thesis is part of a sociological analysis of science fiction narratives centred in the imagination of the thinking machine and cyber heroes with two main examples: Japanese and Americain films. This thesis treats of the subject's ghost in the machine adopting a hermeneutic posture in order to better understand cyberpunk's narratives. He analyses the intersubjective relations between these subject-machines and men in imaginary society. This work exposes the positions of the identity of the android subject puts the propelling energy forwards, “the towards” and the different possibilities or the ways to reach this “towards”. Thus this movement not only brings the artificial creation of life into light but also the particular dimension of the homocybernecu's destiny with its prosthesis and its implants
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Kim, Seonja Thélot Jérôme. ""L'image fantôme" chez Hervé Guibert." Créteil : Université de Paris-Val-de-Marne, 2007. http://doxa.scd.univ-paris12.fr:8080/theses-npd/th0394858.htm.

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Thèse de doctorat : Lettres modernes : Paris 12 : 2004.
Version électronique uniquement consultable au sein de l'Université Paris 12 (Intranet). Titre provenant de l'écran-titre. Bibliogr. : 295 réf.
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Lima, Vanildo Junior de Melo. "Desenvolvimento de fantomas mesh infantis, morfologicamente consistentes com a anatomia humana, para uso em dosimetria." Universidade Federal de Pernambuco, 2011. https://repositorio.ufpe.br/handle/123456789/9342.

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Para o propósito de evitar os efeitos deletérios determinísticos e minimizar a ocorrência dos efeitos estocásticos, em pessoas expostas à radiação ionizante, se faz necessário conhecer as doses equivalentes ou absorvidas em órgãos e tecidos radiosensíveis do corpo humano. Entretanto, estes valores não podem ser medidos diretamente no indivíduo exposto e, por esta razão, são usados fantomas humanos, que são representações físicas ou computacionais, utilizados para determinar coeficientes de conversão entre a dose absorvida nos órgãos e tecidos e grandezas mensuráveis. O procedimento de uso dos fantomas físicos é sabido ser caro e demanda muito tempo, devido a um laborioso procedimento experimental e restrições de segurança. Com o advento dos métodos de simulação Monte Carlo e o surgimento dos computadores, tornou-se gradualmente possível estimar doses absorvidas em órgãos e tecidos em fantomas computacionais. Cada fantoma computacional define não somente as características exteriores do corpo humano, mas inclui detalhes sobre órgãos internos tais como seus volumes e formas. Quando são usadas informações sobre densidade e composição elementar dos tecidos, um fantoma computacional pode ser acoplado a um código de transporte de radiação Monte Carlo para simular interações teciduais e deposição de energia no corpo humano por diversos tipos de radiação. Embora a fonte da radiação tenha que ser matematicamente modelada, o procedimento computacional é, em geral, muito vantajoso em termos da sua versatilidade, eficiência, precisão e segurança. A mais recente geração de fantomas computacionais recebeu a denominação de fantomas mesh. Para sua construção não são essenciais imagens de tomografia computadorizada ou de ressonância magnética e sim a descrição anatômica detalhada das estruturas de interesse. Estes fantomas permitem representar o indivíduo em diferentes posturas e em diferentes estágios do desenvolvimento do corpo humano, e ainda evitam implicações éticas provocadas pelas técnicas de obtenção das imagens dos indivíduos. Neste trabalho são apresentados dois casais de fantomas mesh referenciais, para crianças com 5 anos e 10 anos de idade. Eles foram construídos utilizando-se ferramentas computacionais usadas pela comunidade de computação gráfica, para a criação de filmes de animação. Os parâmetros adotados para as massas dos diferentes órgãos e tecidos foram os recomendados pela publicação 89 da Comissão Internacional de Proteção Radiológica (ICRP), para estudos populacionais. Os volumes destes órgãos e tecidos foram calculados utilizando-se densidades fornecidas pela Comissão Internacional de Unidades e Medidas Radiológicas (ICRU). Quanto à disposição dos diferentes órgãos e tecidos, foram consultadas descrições da anatomia humana. As versões voxelizadas dos fantomas foram conectadas ao código Monte Carlo EGSnrc. As aplicações dosimétricas apresentadas mostram exemplos de que doses absorvidas para órgãos e tecidos, estimadas com estes fantomas infantis, são razoáveis e comparáveis com dados correspondentes obtidos em outros fantomas
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Books on the topic "FANTOM5"

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Chiba, Fumio. Fantoma gensō: 30-nendai Pari no media to geijutsukatachi = Le Fantômas fantôme. Tōkyō: Seidosha, 1998.

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Smith, L. J. Fantom. Warszawa: Wydawnictwo Amber, 2012.

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Bradford, Edward. F is for Fantods: Edward Gorey's Fantod Press : a bibliographic checklist. Yarmouth Port, Mass: Edward Gorey House, 2008.

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Belov, Aleksandr. Fantomy gri͡adushchego. Moskva: AiF-Print, 2003.

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Fantomu: Phantom. Tōkyō: Bungei Shunjū, 2021.

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Fantomu pein. Tōkyō: Hakusuisha, 2002.

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Danielle, Steel. Le fantome. S.L: France Loisirs, 1998.

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Gautier, Théophile. My fantoms. New York: New York Review Books, 2008.

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Fantoma Aniei. New York, USA: First Second, 2011.

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Danielle, Steel. Le fantome. Paris: Presses de la cite, 1998.

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Book chapters on the topic "FANTOM5"

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Abugessaisa, Imad, Shuhei Noguchi, Piero Carninci, and Takeya Kasukawa. "The FANTOM5 Computation Ecosystem: Genomic Information Hub for Promoters and Active Enhancers." In Methods in Molecular Biology, 199–217. New York, NY: Springer New York, 2017. http://dx.doi.org/10.1007/978-1-4939-7015-5_15.

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Gercke, Marcus. "Daten und Methoden." In Trends und Determinanten sozialer Probleme in reichen Ländern, 31–56. Wiesbaden: Springer Fachmedien Wiesbaden, 2022. http://dx.doi.org/10.1007/978-3-658-39865-1_3.

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ZusammenfassungDie vorliegende Arbeit fokussiert auf soziale Probleme in wohlhabenden Ländern. Um entsprechende Länder zu identifizieren, wurde auf die Einkommensklassifikation der World Bank zurückgegriffen (Fantom & Serajuddin, 2016). Gemessen am Bruttonationaleinkommen pro Kopf werden Länder in vier Einkommensklassen unterteilt: (1) hohes Einkommen, (2) oberes mittleres Einkommen, (3) unteres mittleres Einkommen und (4) geringes Einkommen.
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Klinger, Judith, and Carina Schmiedke-Rindt. "Fantome einer fremden Welt." In Freizeit in der Erlebnisgesellschaft, 147–66. Wiesbaden: VS Verlag für Sozialwissenschaften, 1996. http://dx.doi.org/10.1007/978-3-322-87768-0_7.

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Millward, Liz. "‘Un aéroport-fantôme’." In Spectral Spaces and Hauntings, 103–16. 1 [edition]. | New York: Routledge, 2017. | Series: Routledge research in cultural and media studies; 105: Routledge, 2017. http://dx.doi.org/10.4324/9781315719115-7.

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Ihring, Peter. "Leiris, Michel: L'Afrique fantôme." In Kindlers Literatur Lexikon (KLL), 1–2. Stuttgart: J.B. Metzler, 2020. http://dx.doi.org/10.1007/978-3-476-05728-0_4210-1.

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Klinger, Judith, and Carina Schmiedke-Rindt. "Fantome einer fremden Welt Über subkulturellen Eigensinn." In Freizeit in der Erlebnisgesellschaft, 147–66. Wiesbaden: VS Verlag für Sozialwissenschaften, 1998. http://dx.doi.org/10.1007/978-3-322-88972-0_7.

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Gier, Albert. "Leroux, Gaston: Le fantôme de l'opéra." In Kindlers Literatur Lexikon (KLL), 1–2. Stuttgart: J.B. Metzler, 2020. http://dx.doi.org/10.1007/978-3-476-05728-0_12829-1.

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Gentz, Anna. "Cortázar, Julio: Fantomas contra los vampiros multinacionales." In Kindlers Literatur Lexikon (KLL), 1–3. Stuttgart: J.B. Metzler, 2020. http://dx.doi.org/10.1007/978-3-476-05728-0_3256-1.

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Erdle, Birgit R. "Robbe-Grillet, Alain: Topologie d'une cité fantôme." In Kindlers Literatur Lexikon (KLL), 1–2. Stuttgart: J.B. Metzler, 2020. http://dx.doi.org/10.1007/978-3-476-05728-0_17589-1.

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Pals, Holger, Stefan Petri, and Claus Grewe. "FANTOMAS Fault Tolerance for Mobile Agents in Clusters." In Lecture Notes in Computer Science, 1236–47. Berlin, Heidelberg: Springer Berlin Heidelberg, 2000. http://dx.doi.org/10.1007/3-540-45591-4_170.

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Conference papers on the topic "FANTOM5"

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Law, Marc T., Nicolas Thome, and Matthieu Cord. "Fantope Regularization in Metric Learning." In 2014 IEEE Conference on Computer Vision and Pattern Recognition (CVPR). IEEE, 2014. http://dx.doi.org/10.1109/cvpr.2014.138.

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Cruz, Rafael J., and Diego F. Aranha. "Efficient Software Implementations of Fantomas." In Simpósio Brasileiro de Segurança da Informação e de Sistemas Computacionais. Sociedade Brasileira de Computação - SBC, 2016. http://dx.doi.org/10.5753/sbseg.2016.19309.

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We present a series of software implementations of the Fantomas block cipher in resource-constrained ARM devices like the Cortex-M3 and Cortex-M4; and more powerful processors such as the ARM Cortex-A15 and modern Intel platforms. Our implementations span a broad range of characteristics: 32-bit and 64-bit versions, side-channel resistant and vectorized code for NEON and SSE instructions. Our implementations of the algorithm improve the state of the art substantially, both in terms of efficiency or compactness, by making use of novel algorithmic techniques and features specific to the target platform. In particular, our unprotected 32-bit implementation achieves speedups from 35% to 66% in the ARM Cortex-M architecture, while consuming considerably less code size. The vectorized implementations improve performance over the state of the art by 40% in the ARM Cortex-A15 and 50% in the Core i7 Ivy Bridge, setting new speed records for the implementation of the block cipher.
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Куляшов, М. А., С. К. Колмыков, И. С. Евшин, and Ф. А. Колпаков. "DESCRIPTION, CHARACTERISTIC AND ALGORITHM FOR CREATION OF A DICTIONARY OF CELL TYPES AND TISSUES IN THE GTRD DATABASE." In XVII Российская конференция “Распределенные информационно-вычислительные ресурсы: Цифровые двойники и большие данные”. Crossref, 2019. http://dx.doi.org/10.25743/ict.2019.74.16.018.

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База данных GTRD (http://gtrd.biouml.org) содержит информацию по сайтам связывания транскрипционных факторов и участкам открытого хроматина. Клеточные типы и ткани, представленные в GTRD, были: 1) упорядочены в единый словарь (3954 записей); 2) разделены на 90 уникальных кластеров; 3) 3225 записей были сопоставлены с основными существующими базами данных клеточных типов; 4) использованы для сопоставления экспериментов с базами данных по регуляции транскрипции: 588 для FANTOM 5, 5962 для ENCODE и 21720 для GTEx. The GTRD database (http://gtrd.biouml.org) contains information on transcription factor binding sites and open chromatin. The cell types and tissues presented in the GTRD: 1) were arranged in a single dictionary (3954 entries) 2) were divided into 90 unique clusters 3) 3225 records were compared with main databases of cell types 4) were used to match experiments with the databases of transcription regulation: 588 for FANTOM 5, 5962 for ENCODE and 21720 for GTEx.
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Stajila, Emilia. "Fantoma trecutului sovietic în scrierile autorilor emigrați din Republica Moldova." In Conferinta stiintifica nationala cu participare internationala „Lecturi in memoriam acad. Silviu Berejan”. “Bogdan Petriceicu-Hasdeu” Institute of Romanian Philology, Republic of Moldova, 2021. http://dx.doi.org/10.52505/lecturi.2021.05.24.

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După o perioadă lungă de dominație a unui regim sadic, poporul basarabean a rămas să fie bântuit din generație în generație de fantoma trecutului tragic. Mulți dintre martorii oculari ai ororilor sovietice s-au stins, însă au transmis urmașilor niște realități și principii. Unii au rămas pentru decenii înainte să fie niște victime masochiste ale regimului sadic, alții au reușit să vadă din perspectiva adevărului realitățile cumplite care au avut loc în spațiul dintre Nistru și Prut. După destrămarea megasocietății sovietice, Republica Moldova s-a ciocnit cu nesfârșitele crize ale unui stat devenit independent pe neprins de veste. Astfel, cetățenii acestei țări tinere au fost nevoiți să se familiarizeze cu noțiunea de migrație. Lumea a reușit să găsească noi oportunități, doar că acestea au fost cunoscute departe de casă. Migrația și Occidentul au favorizat, în mare parte, dezvoltarea literaturii contemporane din Republica Moldova chiar dacă mulți dintre scriitori sunt stabiliți în alte țări. Experiența migrației a și scos din majoritatea lor starea latentă în care se afla talentul scriitoricesc. Noile experiențe adaugă teme și abordări originale, însă fantoma trecutului sovietic se strecoară ușor prin venele tuturor indivizilor ce-și au originea în Republica Moldova.
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Zubrycki, Igor, Izabela Szafarczyk, and Grzegorz Granosik. "Project Fantom: Co-Designing a Robot for Demonstrating an Epileptic Seizure." In 2018 27th IEEE International Symposium on Robot and Human Interactive Communication (RO-MAN). IEEE, 2018. http://dx.doi.org/10.1109/roman.2018.8525609.

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Karaboce, Baki, Emel Cetin, Mithat Ozdingis, and Huseyin Okan Durmus. "Image measurement verification studies of different objects in tissue-mimicking fantom." In 2017 Medical Technologies National Congress (TIPTEKNO). IEEE, 2017. http://dx.doi.org/10.1109/tiptekno.2017.8238109.

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Hernandez, Olivier, Jean-Luc Gach, Claude Carignan, and Jacques Boulesteix. "FaNTOmM: Fabry Perot of New Technology for the Observatoire du mont Megantic." In Astronomical Telescopes and Instrumentation, edited by Masanori Iye and Alan F. M. Moorwood. SPIE, 2003. http://dx.doi.org/10.1117/12.459893.

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Luidy-Imada, Eddie, Tejasvi Matam, Leonardo Collado-Torres, Wikum Dinalankara, Aleksei Stupnikov, Christopher Wilks, Andrew E. Jaffe, et al. "Abstract 2297: Differential analysis of gene expression across the human genome using recount2 and FANTOM-CAT." In Proceedings: AACR Annual Meeting 2018; April 14-18, 2018; Chicago, IL. American Association for Cancer Research, 2018. http://dx.doi.org/10.1158/1538-7445.am2018-2297.

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Asril, Yosi Sudarsi, Wahyu Edy Wibowo, and Supriyanto A. Pawiro. "VERIFIKASI DOSIMETRI TEKNIK STEREOTACTIC BODY RADIOTHERAPY (SBRT) METASTASIS TULANG: STUDI KASUS MENGGUNAKAN FANTOM HOMOGEN DAN INHOMOGEN." In SEMINAR NASIONAL FISIKA 2016 UNJ. Pendidikan Fisika dan Fisika FMIPA UNJ, 2016. http://dx.doi.org/10.21009/0305020306.

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POLLS, A. "STEFANO FANTONI: FEENBERG MEDALIST 2007 MICROSCOPIC MANY-BODY THEORY OF STRONGLY CORRELATED SYSTEMS." In Proceedings of the 14th International Conference. WORLD SCIENTIFIC, 2008. http://dx.doi.org/10.1142/9789812779885_0002.

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Reports on the topic "FANTOM5"

1

Sun, Xiaobai, and Nikos P. Pitsianis. FANTOM: Algorithm-Architecture Codesign for High-Performance Embedded Signal and Image Processing Systems. Fort Belvoir, VA: Defense Technical Information Center, May 2013. http://dx.doi.org/10.21236/ada581464.

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