Academic literature on the topic 'Expressed Protein Ligation (EPL)'
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Journal articles on the topic "Expressed Protein Ligation (EPL)"
Flavell, Robert R., and Tom W. Muir. "Expressed Protein Ligation (EPL) in the Study of Signal Transduction, Ion Conduction, And Chromatin Biology." Accounts of Chemical Research 42, no. 1 (January 20, 2009): 107–16. http://dx.doi.org/10.1021/ar800129c.
Full textWesterlind, Ulrika. "Synthetic glycopeptides and glycoproteins with applications in biological research." Beilstein Journal of Organic Chemistry 8 (May 30, 2012): 804–18. http://dx.doi.org/10.3762/bjoc.8.90.
Full textJing, Yihang, Dongbo Ding, Gaofei Tian, Ka Chun Jonathan Kwan, Zheng Liu, Toyotaka Ishibashi, and Xiang David Li. "Semisynthesis of site-specifically succinylated histone reveals that succinylation regulates nucleosome unwrapping rate and DNA accessibility." Nucleic Acids Research 48, no. 17 (August 7, 2020): 9538–49. http://dx.doi.org/10.1093/nar/gkaa663.
Full textZasłona, Zbigniew, Carlos H. Serezani, Katsuhide Okunishi, David M. Aronoff, and Marc Peters-Golden. "Prostaglandin E2 restrains macrophage maturation via E prostanoid receptor 2/protein kinase A signaling." Blood 119, no. 10 (March 8, 2012): 2358–67. http://dx.doi.org/10.1182/blood-2011-08-374207.
Full textPujianto, Dwi Ari, Andika Setyoadi, and Asmarinah ,. "Study of Expression and Regulation of Mouse Beta-Defensin 2 as a Model for Understanding Its Role in the Process of Sperm Maturation." Jurnal Biotek Medisiana Indonesia 9, no. 2 (February 5, 2021): 128–38. http://dx.doi.org/10.22435/jbmi.v9i2.4417.
Full textDavid, Ralf, Michael P. O. Richter, and Annette G. Beck-Sickinger. "Expressed protein ligation." European Journal of Biochemistry 271, no. 4 (January 27, 2004): 663–77. http://dx.doi.org/10.1111/j.1432-1033.2004.03978.x.
Full textHenager, Samuel H., Nam Chu, Zan Chen, David Bolduc, Daniel R. Dempsey, Yousang Hwang, James Wells, and Philip A. Cole. "Enzyme-catalyzed expressed protein ligation." Nature Methods 13, no. 11 (September 26, 2016): 925–27. http://dx.doi.org/10.1038/nmeth.4004.
Full textQiao, Yuchen, Ge Yu, Kaci C. Kratch, Xiaoyan Aria Wang, Wesley Wei Wang, Sunshine Z. Leeuwon, Shiqing Xu, Jared S. Morse, and Wenshe Ray Liu. "Expressed Protein Ligation without Intein." Journal of the American Chemical Society 142, no. 15 (March 26, 2020): 7047–54. http://dx.doi.org/10.1021/jacs.0c00252.
Full textKamei, Ayako, Paul S. Hauser, Jennifer A. Beckstead, Paul M. M. Weers, and Robert O. Ryan. "Expressed protein ligation-mediated template protein extension." Protein Expression and Purification 83, no. 2 (June 2012): 113–16. http://dx.doi.org/10.1016/j.pep.2012.03.014.
Full textHondal, Robert J., Bradley L. Nilsson, and Ronald T. Raines. "Selenocysteine in Native Chemical Ligation and Expressed Protein Ligation." Journal of the American Chemical Society 123, no. 21 (May 2001): 5140–41. http://dx.doi.org/10.1021/ja005885t.
Full textDissertations / Theses on the topic "Expressed Protein Ligation (EPL)"
MAZZOLENI, ELISA. "Exploration of new techniques for purification and chemo-selective conjugation of bioreagents for immunodiagnostic applications." Doctoral thesis, Università degli Studi di Milano-Bicocca, 2015. http://hdl.handle.net/10281/68468.
Full textAntigen and antibody are the two key reagents for an immunodiagnostic assay. Investigation of new techniques and improvement of processes such as purification and site-specific labeling of antigen and antibody molecules can promote the development of new more powerful bioreagents able of improving the performance of immunodiagnostic assays. The first part of this thesis aimed to explore innovative biotechnology techniques in antigen production for the improvement of immunoassays that allow the detection of antibodies directed against the Epstein-Barr virus. EBV virus is the causative agent of infectious mononucleosis and it is considered to be associated with a still increasing number of tumors; for this reason it is important to develop diagnostic assays for EBV detection with high specificity and sensitivity. The viral capsid protein VCA p18 is one of the most important antigens for the diagnosis of EBV. The current Diasorin LIAISON EBV VCA IgM and IgG assays rely on a single antigen, consisting in a synthetic peptide corresponding to the immunodominant C-terminal portion of the p18 protein, which is immobilized on solid phase (indirect format). The several methods explored in this thesis have allowed to obtain different variants of the p18 antigen with the aim to improve the performance of DiaSorin LIAISON EBV VCA IgM and IgG assays at different levels: 1_production of p18 antigen; 2_immobilization of p18 antigen on solid phase; 3_immunoassay format. 1_ The length of the immunodominant C-terminal portion of the p18 protein (57aa) appears to be considerable for the synthetic route but, at the same time, too small to be effectively produced in a recombinant fashion. To overcome this problem, we explored the Elastin Like Polypeptides (ELP)-Intein system, a method based on the use of a self-cleavable protein (the intein) and a temperature responsive tag (ELP). This technique has proved to be an excellent system for the preparation of the p18 peptide. 2_The development of different variants of p18 antigen has enabled to explore different techniques for the immobilization of the same antigen on solid phase: direct covalent coating, through streptavidin-biotin complex and through an innovative procedure based on the use of leucine zipper (or “velcro”) peptides. The immobilization of the p18 peptide on solid phase through these different methods occurred successfully and the immunochemical activity of the antigen, immobilized with these innovative techniques, is comparable or better than that of the synthetic peptide used in the current immunoassays. 3_Despite the DiaSorin LIAISON EBV VCA IgM immonoassay has a good analytical performance, in order to obtain an increase of specificity, a new assay format was explored. Unfortunately, the results indicate that this different type of format reaches a lower level of specificity than that of current assay. The second part of this thesis aimed to explore an innovative method for the site-specific labeling of antibodies. One the most promising approach is based on the generation of free thiol groups by selective partial reduction of the interchain disulfide bridges present at the level of the “hinge region” and their reaction to labels carrying sulfhydryl-reactive chemical groups. This technology was used for the biotinylation of two different antibodies currently used in immunoassays for the HIV p24 viral protein and for FGF23 antigen detection. The results suggest that the site-specific biotinylation compared to the random traditional biotinylation promotes a great improvement of antibodies immunochemical activity with a consequent optimization of immunodiagnostic assays performance.
Mokhtar, Shaza. "Semi-synthesis of ubiquitinated androgen receptor peptides using an expressed protein ligation system." Thesis, McGill University, 2014. http://digitool.Library.McGill.CA:80/R/?func=dbin-jump-full&object_id=121439.
Full textAbrégé:Le gène de 90-kb du récepteur androgène (AR) est localisé au locus Xq11-12 et possède huit exons codant pour une protéine d'environ 919 acides aminés. L'exon 1 code pour le domaine transactivationnel, les exons 2 et 3 codent pour le domaine de liaison à l'ADN, et les exons 4 à 8 codent pour le domaine de liaison au ligand. La protéine du AR, un récepteur nucléaire appartenant à la famille des récepteurs hormonaux stéroïdiens/thyroïdiens, agit primordialement en tant que facteur transcriptionnel se liant à l'ADN pour réguler l'expression génique. Le AR possède également un rôle dans le développement du phénotype masculin: en effet, le AR cytoplasmique est activé en se liant aux hormones testostérone ou dihydrotestostérone avant de se translocaliser au noyau.L'amyotrophie bulbo-spinale (SBMA-Spinal and Bulbar Muscular Atrophy), aussi connue sous le nom de maladie de Kennedy, est une maladie neurodégénérative liée au chromosome X récessif. La cause de la SBMA est une expansion du triplet CAG répété, lequel code pour une glutamine (Gln,Q), dans l'exon 1 du gène AR. Ainsi, la SBMA est considérée comme étant un désordre d'expansion polyglutaminique (poly-Gln). Chez l'homme non-affecté, on retrouve 9-33 répétitions CAG codant pour la Gln, alors que l'homme qui hérite plus de 37 répétitions CAG développera la SBMA. Le gain de fonction toxique du AR caractérisant la SBMA se traduit par: une faiblesse musculaire à progression lente, une atrophie de la langue, des fasciculations des muscles bulbaires, faciaux et limbiques et enfin par des crampes musculaires. Une perte de fonction du AR est liée à l'élargissement de la poitrine et à la fertilité réduite.Le système ubiquitine-protéasome (UPS), responsable dans la dégradation protéique, joue un rôle important dans les cellules neurales chez les patients atteints de la SBMA. Les composantes de l'UPS se trouvent dans les aggrégats protéiques de l'expansion poly-Gln dans ces cellules. C'est la raison pour laquelle des études précédentes ont suggéré que l'UPS est affaibli dans la SBMA. D'autres études antérieures suggèrent que les peptides 0QAR et 20QAR peuvent être dégradés par l'UPS, cependant le peptide 50QAR semble inhiber la dégradation par lUPS de certaines protéines spécifiques. L'hypothèse veut que ces mutants AR responsables de la SBMA peuvent s'accumuler dans la cellule et causer la maladie en s'évadant de la dégradation UPS. Le but premier de ce projet était de développer un système d'ubiquitination du AR en appliquant le système de ligation des protéines exprimées (expressed protein ligation-EPL). Afin de prouver cette hypothèse, quelques buts intermédiaires ont été atteints. Les fragments du AR (0Q, 20Q, et 50Q), amplifiés par PCR, ont été clonés dans le vecteur pTWIN2 et les clones ont été analysés sur gels d'électrophorèse suite aux digestions par enzymes de restriction. De plus, les fragments 0QAR, 20QAR et 50QAR ainsi que les protéines de fusion de l'ubiquitine humaine (HUB) ont été purifiés à l'aide de billes de chitine et clivés par l'acide mercapto-2-éthanesulfonique (MESNA).Les peptides 0QAR, 20QAR et 50QAR ont été unis par ligation au peptide de fusion H2B doté d'un tag HA en se servant du système EPL. Ainsi, nous avons développé avec succès des outils permettant d'explorer l'ubiquitination du AR en utilisant les systèmes EPL in vitro. Des expériences à l'avenir viseront à lier par ligation la protéine HUB à un peptide, en utilisant la méthode EPL et ensuite faire la ligation du peptide ubiquitiné aux trois différents peptides AR. Ces derniers seront ajoutés aux protéasomes actifs pour explorer l'implication de l'UPS dans la pathogénèse de la SBMA.
Abel, Sabine. "Kombination chemischer, gentechnischer und enzymatischer Methoden zur Darstellung schwer synthetisierbarer Proteine." Doctoral thesis, Humboldt-Universität zu Berlin, Mathematisch-Naturwissenschaftliche Fakultät I, 2014. http://dx.doi.org/10.18452/16962.
Full textThe fibril forming beta2-microglobulin (b2m) and the CRF1 mimic with branched peptide backbone could be considered as “difficult” proteins, whose synthesis is suited for determining present possibilities and limits of protein synthesis. The proteins shall be used for spectroscopic analysis of protein misfolding or ligand-receptor-interaction, respectively. Efforts of the chemosynthesis of b2m over three segments may lead via NCL to linear products with correct primary structure, but two, via HPLC isolatable proteins were repetitively susbstained, whose enzymatic digest lead to identical fragments. An isomerization (such as e. g. epimerization) as reason for the formation of the two products could be excluded. By means of CD and FTIR spectroscopy for both products beta-sheet structure were determined, which differ among themselves as well as from the recombinant protein. The “misfolded” synthetic product could not be unfolded und subsequently converted into the “correct” structure of the recombinant b2m. It is possible that the observed “misfolding”, whose cause could not be clarified, is reasonable for the amyloidosis induced by b2m. The CRF1 model that consists of three cyclic peptides and one protein with disulfid bridges coupled to a linear peptide template, was modified for structural constraints by a cyclic template. In consequence of the cyclic template no synthetic problems aroused, although the cyclisation of the template leads interestingly to a significant higher affinity for the antagonist urocortin-I in the functional assay. Furthermore, it was shown that a cyclic receptor loop peptide could be received via EPL in mg scale, what in future enables the synthesis of isotopically labeled analogs for structure investigations.
Howard, Cecil J. II. "Altering Histone Dynamics in vitro and in vivo." The Ohio State University, 2018. http://rave.ohiolink.edu/etdc/view?acc_num=osu1525710272163053.
Full textBooks on the topic "Expressed Protein Ligation (EPL)"
Vila-Perelló, Miquel, ed. Expressed Protein Ligation. New York, NY: Springer US, 2020. http://dx.doi.org/10.1007/978-1-0716-0434-2.
Full textVila-Perelló, Miquel. Expressed Protein Ligation: Methods and Protocols. Springer, 2020.
Find full textVila-Perelló, Miquel. Expressed Protein Ligation: Methods and Protocols. Springer, 2021.
Find full textBook chapters on the topic "Expressed Protein Ligation (EPL)"
Wang, Zhipeng A., and Philip A. Cole. "Methods and Applications of Expressed Protein Ligation." In Expressed Protein Ligation, 1–13. New York, NY: Springer US, 2020. http://dx.doi.org/10.1007/978-1-0716-0434-2_1.
Full textPrescott, Nicholas A., and Yael David. "In Vivo Histone Labeling Using Ultrafast trans-Splicing Inteins." In Expressed Protein Ligation, 201–19. New York, NY: Springer US, 2020. http://dx.doi.org/10.1007/978-1-0716-0434-2_10.
Full textUmlauf, Benjamin J., and Eric V. Shusta. "Site-Directed Modification of Yeast-Produced Proteins Using Expressed Protein Ligation." In Expressed Protein Ligation, 221–33. New York, NY: Springer US, 2020. http://dx.doi.org/10.1007/978-1-0716-0434-2_11.
Full textMa, Sana, Kristian Strømgaard, and Louise S. Clemmensen. "Site-Specific Phosphorylation of PDZ Domains." In Expressed Protein Ligation, 235–61. New York, NY: Springer US, 2020. http://dx.doi.org/10.1007/978-1-0716-0434-2_12.
Full textGuidotti, Nora, and Beat Fierz. "Semisynthesis and Reconstitution of Nucleosomes Carrying Asymmetric Histone Modifications." In Expressed Protein Ligation, 263–91. New York, NY: Springer US, 2020. http://dx.doi.org/10.1007/978-1-0716-0434-2_13.
Full textWeller, Caroline E., and Champak Chatterjee. "Facile Semisynthesis of Ubiquitylated Peptides with the Ligation Auxiliary 2-Aminooxyethanethiol." In Expressed Protein Ligation, 293–312. New York, NY: Springer US, 2020. http://dx.doi.org/10.1007/978-1-0716-0434-2_14.
Full textGalesic, Ana, and Matthew R. Pratt. "Investigating the Effects of O-GlcNAc Modifications in Parkinson’s Disease Using Semisynthetic α-Synuclein." In Expressed Protein Ligation, 313–26. New York, NY: Springer US, 2020. http://dx.doi.org/10.1007/978-1-0716-0434-2_15.
Full textCampbell, Maria Jose, Jingtan Su, and Julio A. Camarero. "Recombinant Expression of Cyclotides Using Expressed Protein Ligation." In Expressed Protein Ligation, 327–41. New York, NY: Springer US, 2020. http://dx.doi.org/10.1007/978-1-0716-0434-2_16.
Full textMukherjee, Somnath, Maria Matveenko, and Christian F. W. Becker. "Highly Precise Protein Semisynthesis through Ligation–Desulfurization Chemistry in Combination with Phenacyl Protection of Native Cysteines." In Expressed Protein Ligation, 343–58. New York, NY: Springer US, 2020. http://dx.doi.org/10.1007/978-1-0716-0434-2_17.
Full textRomero-Casañas, Alejandro, Verónica Gordo, Jessica Castro, and Marc Ribó. "Protein Splicing: From the Foundations to the Development of Biotechnological Applications." In Expressed Protein Ligation, 15–29. New York, NY: Springer US, 2020. http://dx.doi.org/10.1007/978-1-0716-0434-2_2.
Full textConference papers on the topic "Expressed Protein Ligation (EPL)"
Gheysen, D., L. Piérard, P. Jacobs, H. R. Lijnen, A. Bollen, and D. Collen. "PROPERTIES OF A HUMAN RECOMBINANT FUSION PROTEIN OF THE ‘FINGER’ DOMAIN OF TISSUE-TYPE PLASMINOGEN ACTIVATOR (t-PA) AND A TRUNCATED SINGLE CHAIN UROKINASE-TYPE PLASMINOGEN ACTIVATOR (scu-PA)." In XIth International Congress on Thrombosis and Haemostasis. Schattauer GmbH, 1987. http://dx.doi.org/10.1055/s-0038-1643941.
Full textDischer, Dennis, and Adam Engler. "Mesenchymal Stem Cell Injection After Myocardial Infarction Improves Myocardial Compliance." In ASME 2007 Summer Bioengineering Conference. American Society of Mechanical Engineers, 2007. http://dx.doi.org/10.1115/sbc2007-176754.
Full textLijnen, H. R., L. Nelles, G. Lemmens, D. Collen, and W. E. Holmes. "A FUSION PROTEIN OF THE A-CHAIN OF t-PA WITH LOW Mr scu-PA COMBINES THE FIBRIN-SPECIFICITY OF BOTH MOLECULES." In XIth International Congress on Thrombosis and Haemostasis. Schattauer GmbH, 1987. http://dx.doi.org/10.1055/s-0038-1643943.
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