Academic literature on the topic 'Environmental genomic'
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Journal articles on the topic "Environmental genomic":
Zhao, Hao‐Qian, Wen‐Qing Wei, Chao Zhao, and Ze‐Xiong Xie. "Genomic markers on synthetic genomes." Engineering in Life Sciences 21, no. 12 (November 10, 2021): 825–31. http://dx.doi.org/10.1002/elsc.202100030.
Greer, Charles W. "Genomic Technologies for Environmental Science." Soil and Sediment Contamination: An International Journal 11, no. 3 (May 2002): 403–8. http://dx.doi.org/10.1080/20025891106835.
Kappil, Maya, Luca Lambertini, and Jia Chen. "Environmental Influences on Genomic Imprinting." Current Environmental Health Reports 2, no. 2 (May 1, 2015): 155–62. http://dx.doi.org/10.1007/s40572-015-0046-z.
Heidelberg, Karla B., and John F. Heidelberg. "Marine Environmental Genomics: New Secrets from a Mysterious Ocean." Marine Technology Society Journal 39, no. 3 (September 1, 2005): 94–98. http://dx.doi.org/10.4031/002533205787442549.
Orsini, Luisa, Ellen Decaestecker, Luc De Meester, Michael E. Pfrender, and John K. Colbourne. "Genomics in the ecological arena." Biology Letters 7, no. 1 (August 11, 2010): 2–3. http://dx.doi.org/10.1098/rsbl.2010.0629.
Mani, Ram-Shankar, and Arul M. Chinnaiyan. "Triggers for genomic rearrangements: insights into genomic, cellular and environmental influences." Nature Reviews Genetics 11, no. 12 (November 3, 2010): 819–29. http://dx.doi.org/10.1038/nrg2883.
Jirtle, R. L., M. Sander, and J. C. Barrett. "Genomic imprinting and environmental disease susceptibility." Environmental Health Perspectives 108, no. 3 (March 2000): 271–78. http://dx.doi.org/10.1289/ehp.00108271.
Morales, Hernán E., Rui Faria, Kerstin Johannesson, Tomas Larsson, Marina Panova, Anja M. Westram, and Roger K. Butlin. "Genomic architecture of parallel ecological divergence: Beyond a single environmental contrast." Science Advances 5, no. 12 (December 2019): eaav9963. http://dx.doi.org/10.1126/sciadv.aav9963.
Mani, Ram-Shankar, and Arul M. Chinnaiyan. "Erratum: Triggers for genomic rearrangements: insights into genomic, cellular and environmental influences." Nature Reviews Genetics 12, no. 2 (January 18, 2011): 150. http://dx.doi.org/10.1038/nrg2953.
STANOJEVIĆ, Dragan, Radica Ć. ĐEDOVIĆ, and Nikolija GLIGOVIĆ. "GENOMICS AS A TOOL FOR IMPROVING DAIRY CATTLE POPULATIONS." "Annals of the University of Craiova - Agriculture Montanology Cadastre Series " 53, no. 1 (December 30, 2023): 291–97. http://dx.doi.org/10.52846/aamc.v53i1.1479.
Dissertations / Theses on the topic "Environmental genomic":
Yang, Bin, and 杨彬. "A novel framework for binning environmental genomic fragments." Thesis, The University of Hong Kong (Pokfulam, Hong Kong), 2010. http://hub.hku.hk/bib/B45789344.
Jackson, Colin John. "The typing and environmental detection of Campylobacter jejuni." Thesis, Manchester Metropolitan University, 1995. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.262007.
Herzog, Rebecca [Verfasser]. "Global change genomics - comparative genomic analyses on environmental associated speciation and adaptation processes in Odonata / Rebecca Herzog." Hannover : Gottfried Wilhelm Leibniz Universität, 2021. http://d-nb.info/1238221785/34.
Finke, Jan Felix. "Environmental and genomic insights into marine virus populations and communities." Thesis, University of British Columbia, 2017. http://hdl.handle.net/2429/61997.
Science, Faculty of
Earth, Ocean and Atmospheric Sciences, Department of
Graduate
Chan, Yu-ki, and 陳裕琪. "Environmental genomic analysis of refuge habitats in hyper-arid deserts." Thesis, The University of Hong Kong (Pokfulam, Hong Kong), 2011. http://hub.hku.hk/bib/B46917366.
Skutas, Jorie L. "Microbial and Genomic Analysis of Environmental Samples in Search of Pathogenic Salmonella." NSUWorks, 2017. http://nsuworks.nova.edu/occ_stuetd/461.
Gray, Miranda M. "Genomic differentiation of big bluestem (Andropogon gerardii) along the Great Plains’ environmental gradient." Thesis, Kansas State University, 2012. http://hdl.handle.net/2097/14626.
Department of Plant Pathology
Eduard D. Akhunov
Loretta C. Johnson
Big bluestem (Andropogon gerardii Vitman) is an ecologically dominant grass of the North American grasslands with precipitation-dependent productivity. However, climatic predictions for big bluestem’s dominant range in the Great Plains include increased periods of drought. The main objectives of this research were to determine the extent of neutral and non-neutral genetic differentiation and diversity among putative big bluestem ecotypes using amplified fragment length polymorphism (AFLP) markers. This is the first study of both neutral and non-neutral genetic diversity of big bluestem which also includes source populations of well-described ecotypes studied in reciprocal common gardens. A total of 378 plants were genotyped from 11 source prairies, originating from one of three ecoregions (Central Kansas, Eastern Kansas, and Illinois). Using two AFLP primer sets, 387 polymorphic markers (error rate 9.18%) were found. Un-rooted neighbor joining tree and principle-component analyses showed continuous genetic differentiation between Kansas and Illinois putative ecotypes, with genetic overlap occurring between Kansas ecotypes. Analysis of molecular variance showed high diversity within-prairie sites (80%) relative to across-prairies (11%), and across- ecoregions (9%) (p<0.001). Within-prairie genetic diversity levels were similar among ecoregions (84-92%), with the highest genetic variation maintained in Illinois prairies (92%). Population structure analyses supported K=6 genetic clusters across the environmental gradient, with Kansas prairies belonging to three main genetic groups, and Illinois prairies having largely divergent allele frequencies from Kansas prairies. Interestingly, BAYESCAN analysis of the three putative ecotypes identified eight F[subscript]ST-outlier AFLP loci under potential diversifying selection. Frequency patterns of loci under diversifying selection were further linked to geo-environmental descriptors including precipitation, temperature severity, diurnal temperature variation, prairie location, and elevation. The observed allele frequency divergence between Kansas and Illinois ecotypes suggests tallgrass restorations should consider possible maladaptation of non-local ecotypes and genetic swamping. However, high within-prairie genetic variation may help individual big bluestem populations withstand climatic variability.
Curreem, Oi-ting Shirly. "The study of environmental adaptability of laribacter hongkongensis by genomic and proteomic approach." Click to view the E-thesis via HKUTO, 2009. http://sunzi.lib.hku.hk/hkuto/record/B43931686.
Braff, Jennifer C. "Construction and phenotypic screening of mid-size insert marine microbial environmental genomic libraries." Thesis, Massachusetts Institute of Technology, 2008. http://hdl.handle.net/1721.1/43722.
Includes bibliographical references (leaves 52-56).
Functional screening of environmental genomic libraries permits the identification of clones expressing activities of interest without requiring prior knowledge of the genes responsible. In this study, protocols were optimized for the construction of mid-size DNA insert, inducible expression environmental genomic plasmid libraries for this purpose. A library with a mean insert size of 5.2 kilobases was constructed with environmental DNA isolated from surface ocean water collected at Hawaii Ocean Time-series station ALOHA in plasmid cloning vector pMCL200 under the inducible control of the PLAC promoter. To begin to evaluate the utility of such libraries for gene expression-based screens, this library was screened phenotypically for clones expressing genes that confer fluorescence or distinctive coloration on colonies of host Escherichia coli cells, and results were compared to those for a fosmid library constructed from the same marine microbial DNA sample. Ecologically relevant sequences were identified in both libraries, and each was observed to offer both advantages and disadvantages. Results of this study suggest that mid-size insert plasmid libraries under the control of inducible promoters can provide a useful and complementary approach for both functional screening and shotgun sequencing of environmental genomic libraries.
by Jennifer C. Braff.
S.M.
Tsai, Yeng-Chieh. "The application of two-dimensional genomic DNA nylon matrix for environmental samples analysis." Access to citation, abstract and download form provided by ProQuest Information and Learning Company; downloadable PDF file, 67 p, 2009. http://proquest.umi.com/pqdweb?did=1654501591&sid=1&Fmt=2&clientId=8331&RQT=309&VName=PQD.
Books on the topic "Environmental genomic":
Dick, Gregory. Genomic Approaches in Earth and Environmental Sciences. Chichester, UK: John Wiley & Sons, Ltd, 2018. http://dx.doi.org/10.1002/9781118708231.
Pool, Robert. Environmental contamination, biotechnology, and the law: The impact of emerging genomic information. Washington, D.C: National Academy Press, 2001.
Greated, Alicia. The IncP-9 plasmid group: Characterisation of genomic sequences and development of tools for environmental monitoring. Birmingham: University of Birmingham, 2000.
Martin, C. Cristofre, and C. Cristofre Martin, eds. Environmental Genomics. Totowa, NJ: Humana Press, 2008. http://dx.doi.org/10.1007/978-1-59745-548-0.
Cristofre, Martin C., ed. Environmental genomics. Totowa, N.J: Humana, 2007.
Bridge, Paul, David Smith, and Erko Stackebrandt, eds. Trends in the systematics of bacteria and fungi. Wallingford: CABI, 2021. http://dx.doi.org/10.1079/9781789244984.0000.
Martin, Francis, and Stephane Uroz, eds. Microbial Environmental Genomics (MEG). New York, NY: Springer New York, 2016. http://dx.doi.org/10.1007/978-1-4939-3369-3.
Martin, Francis, and Stephane Uroz, eds. Microbial Environmental Genomics (MEG). New York, NY: Springer US, 2023. http://dx.doi.org/10.1007/978-1-0716-2871-3.
Cellura, A. Raymond. The genomic environment and niche-experience. Abbeville, SC: Cedar Springs Press, 2004.
Cellura, A. Raymond. The genomic environment and niche-experience. Abbeville, SC: Cedar Springs Press, 2005.
Book chapters on the topic "Environmental genomic":
Rajesh, Thangamani, Jeyaprakash Rajendhran, and Paramasamy Gunasekaran. "Genomic Technologies in Environmental Bioremediation." In Microorganisms in Environmental Management, 701–18. Dordrecht: Springer Netherlands, 2011. http://dx.doi.org/10.1007/978-94-007-2229-3_31.
Shintani, Masaki, and Kazuhide Kimbara. "Genomic Features and Genome-Wide Analyses of Dioxin-Like Compound Degraders." In Manual of Environmental Microbiology, 5.1.1–1–5.1.1–10. Washington, DC, USA: ASM Press, 2015. http://dx.doi.org/10.1128/9781555818821.ch5.1.1.
Ahrendt, Steven R., Stephen J. Mondo, Sajeet Haridas, and Igor V. Grigoriev. "MycoCosm, the JGI’s Fungal Genome Portal for Comparative Genomic and Multiomics Data Analyses." In Microbial Environmental Genomics (MEG), 271–91. New York, NY: Springer US, 2022. http://dx.doi.org/10.1007/978-1-0716-2871-3_14.
Sobti, RC, Apurav Sharma, and Sanjeev Kumar Soni. "Applications of Biotechnological Techniques in Mitigating Environmental Concerns." In Genomic, Proteomics, and Biotechnology, 249–312. Boca Raton: CRC Press, 2022. http://dx.doi.org/10.1201/9781003220831-17.
Dubrova, Yuri E. "Genomic Instability in the Offspring of Irradiated Parents." In Radiobiology and Environmental Security, 127–39. Dordrecht: Springer Netherlands, 2011. http://dx.doi.org/10.1007/978-94-007-1939-2_12.
Balkenhol, Niko, Rachael Y. Dudaniec, Konstantin V. Krutovsky, Jeremy S. Johnson, David M. Cairns, Gernot Segelbacher, Kimberly A. Selkoe, et al. "Landscape Genomics: Understanding Relationships Between Environmental Heterogeneity and Genomic Characteristics of Populations." In Population Genomics, 261–322. Cham: Springer International Publishing, 2017. http://dx.doi.org/10.1007/13836_2017_2.
Yang, T. C., M. Durante, K. A. George, and S. Yamada. "Genomic Alterations in Radiogenic Cell Transformation." In Fundamentals for the Assessment of Risks from Environmental Radiation, 281–88. Dordrecht: Springer Netherlands, 1999. http://dx.doi.org/10.1007/978-94-011-4585-5_36.
Ramanand, Susmita G., and Ram S. Mani. "Genetic, Environmental, and Nuclear Factors Governing Genomic Rearrangements." In Advances in Experimental Medicine and Biology, 57–66. Cham: Springer International Publishing, 2019. http://dx.doi.org/10.1007/978-3-030-32656-2_3.
Gürgan, Muazzez, Eylül İrem İrez, and Sevinç Adiloğlu. "Understanding Bioremediation of Metals and Metalloids by Genomic Approaches." In Omics Insights in Environmental Bioremediation, 375–92. Singapore: Springer Nature Singapore, 2022. http://dx.doi.org/10.1007/978-981-19-4320-1_16.
Habyarimana, Ephrem, and Sofia Michailidou. "Genomic Prediction and Selection in Support of Sorghum Value Chains." In Big Data in Bioeconomy, 207–18. Cham: Springer International Publishing, 2021. http://dx.doi.org/10.1007/978-3-030-71069-9_16.
Conference papers on the topic "Environmental genomic":
Afanasyeva, K. P., A. N. Rusakovich, N. E. Kharchenko, I. D. Aleksandrov, and M. V. Aleksandrova. "GENOMIC CHANGES IN THE PROGENY OF DROSOPHILA MELANOGASTER MALES IRRADIATED BY y-RAYS." In SAKHAROV READINGS 2022: ENVIRONMENTAL PROBLEMS OF THE XXI CENTURY. International Sakharov Environmental Institute of Belarusian State University, 2022. http://dx.doi.org/10.46646/sakh-2022-1-328-331.
Singer, William, Bo Zhang, Dajun Yu, David Holshouser, Haibo Huang, Keren Brooks, Maria Rosso, and Mark Reiter. "Evaluating Breeding and Management Solutions for Methionine Content in Soybean." In 2022 AOCS Annual Meeting & Expo. American Oil Chemists' Society (AOCS), 2022. http://dx.doi.org/10.21748/qvdx5082.
Ding, G. H., X. Han, Z. D. Xu, X. X. Jin, C. Y. Chi, and B. D. Liu. "Preliminary report about genomic methylation of twoIva xanthifoliapopulations using MSAP method." In International Conference on Environmental Science and Biological Engineering. Southampton, UK: WIT Press, 2014. http://dx.doi.org/10.2495/esbe140851.
Dudaniec, Rachael. "Genomic adaptation along an environmental gradient in range-expanding damselflies(Ischnura elegans)." In 2016 International Congress of Entomology. Entomological Society of America, 2016. http://dx.doi.org/10.1603/ice.2016.93376.
Boughattas, Sonia, Dana Al Batesh, Bruno Giraldes, Asmaa Al-Thani, and Fatiha Benslimane. "Optimized DNA Extracting Method for Oxford Nanopore- Long reads Sequencing from Marine samples." In Qatar University Annual Research Forum & Exhibition. Qatar University Press, 2020. http://dx.doi.org/10.29117/quarfe.2020.0136.
Reva, Oleg N., and Oliver Bezuidt. "Visualization of Distribution of Pathogenicity Genomic Islands between Pathogenic, Nosocomial and Environmental Bacteria." In 2012 16th International Conference on Information Visualisation (IV). IEEE, 2012. http://dx.doi.org/10.1109/iv.2012.98.
Petrosyan, M. S., and L. S. Nersesova. "THE EFFECT OF CREATINE AS DIETARY SUPPLEMENT ON GENOMIC INSTABILITY OF MONONUCLEAR CELLS OF PERIFERAL BLOOD AND HEPATOCYTES OF RATS IMPACTED BY X-RAY RADIATION." In SAKHAROV READINGS 2021: ENVIRONMENTAL PROBLEMS OF THE XXI CENTURY. International Sakharov Environmental Institute, 2021. http://dx.doi.org/10.46646/sakh-2021-1-310-313.
Makanjuola, B. O., G. Rovere, B. C. D. Cuyabano, S. H. Lee, and C. Gondro. "283. Including environmental variables in genomic models for carcass traits in Hanwoo beef cattle." In World Congress on Genetics Applied to Livestock Production. The Netherlands: Wageningen Academic Publishers, 2022. http://dx.doi.org/10.3920/978-90-8686-940-4_283.
Yang, Bin, Yu Peng, Henry C. M. Leung, S. M. Yiu, J. C. Chen, and Francis Y. L. Chin. "Unsupervised binning of environmental genomic fragments based on an error robust selection of l-mers." In Proceeding of the third international workshop. New York, New York, USA: ACM Press, 2009. http://dx.doi.org/10.1145/1651318.1651322.
M, HAMED, HELMS V, and ZAPP A. "SnvDMiR Associating the genomic proximity of genetic variants with deregulated miRNAs and differentially methylated regions." In Second International Conference on Advances in Bio-Informatics and Environmental Engineering - ICABEE 2015. Institute of Research Engineers and Doctors, 2015. http://dx.doi.org/10.15224/978-1-63248-043-9-127.
Reports on the topic "Environmental genomic":
Holden, Lindsay. Investigating the Role of Genomic Variation in Susceptibility to Environmental Chemicals across Populations. Portland State University Library, January 2000. http://dx.doi.org/10.15760/etd.6255.
Gabrielle N. Pecora, Francine C. Reid, Lauren M. Tom, Yvette M. Piceno, and Gary L. Andersen. DNA Everywhere. A Guide for Simplified Environmental Genomic DNA Extraction Suitable for Use in Remote Areas. Office of Scientific and Technical Information (OSTI), May 2016. http://dx.doi.org/10.2172/1249500.
Seroussi, E., L. Ma, and G. Liu. Genetic analyses of recombination and PRDM9 alleles and their implications in dairy cattle breeding. Israel: United States-Israel Binational Agricultural Research and Development Fund, 2020. http://dx.doi.org/10.32747/2020.8134158.bard.
Hulata, Gideon, Thomas D. Kocher, Micha Ron, and Eyal Seroussi. Molecular Mechanisms of Sex Determination in Cultured Tilapias. United States Department of Agriculture, October 2010. http://dx.doi.org/10.32747/2010.7697106.bard.
Dudareva, Natalia, Alexander Vainstein, Eran Pichersky, and David Weiss. Integrating biochemical and genomic approaches to elucidate C6-C2 volatile production: improvement of floral scent and fruit aroma. United States Department of Agriculture, September 2007. http://dx.doi.org/10.32747/2007.7696514.bard.
Seale, Maria, R. Salter, Natàlia Garcia-Reyero,, and Alicia Ruvinsky. A fuzzy epigenetic model for representing degradation in engineered systems. Engineer Research and Development Center (U.S.), September 2022. http://dx.doi.org/10.21079/11681/45582.
Iudicone, Daniele, and Marina Montresor. Omics community protocols. EuroSea, 2023. http://dx.doi.org/10.3289/eurosea_d3.19.
Rajarajan, Kunasekaran, Alka Bharati, Hirdayesh Anuragi, Arun Kumar Handa, Kishor Gaikwad, Nagendra Kumar Singh, Kamal Prasad Mohapatra, et al. Status of perennial tree germplasm resources in India and their utilization in the context of global genome sequencing efforts. World Agroforestry, 2020. http://dx.doi.org/10.5716/wp20050.pdf.
Abbott, Albert G., Doron Holland, Douglas Bielenberg, and Gregory Reighard. Structural and Functional Genomic Approaches for Marking and Identifying Genes that Control Chilling Requirement in Apricot and Peach Trees. United States Department of Agriculture, September 2009. http://dx.doi.org/10.32747/2009.7591742.bard.
Lers, Amnon, and Gan Susheng. Study of the regulatory mechanism involved in dark-induced Postharvest leaf senescence. United States Department of Agriculture, January 2009. http://dx.doi.org/10.32747/2009.7591734.bard.