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Dissertations / Theses on the topic 'DNA microarrays gene expression'

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Published: 4 June 2021

Last updated: 11 February 2022

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1

Szeto, Lap Keung. "Clustering analysis of microarray gene expression data /." access full-text access abstract and table of contents, 2005. http://libweb.cityu.edu.hk/cgi-bin/ezdb/thesis.pl?mphil-it-b19885817a.pdf.

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Thesis (M.Phil.)--City University of Hong Kong, 2005.<br>"Submitted to Department of Computer Engineering and Information Technology in partial fulfillment of the requirements for the degree of Master of Philosophy" Includes bibliographical references (leaves 70-79)

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Pendleton, Carly R. "A simulation-based approach for evaluating gene expression analyses /." Diss., CLICK HERE for online access, 2007. http://contentdm.lib.byu.edu/ETD/image/etd1753.pdf.

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3

Alleyne, Renikko. "Tool for the identification of differentially expressed genes using a user-defined threshold /." Link to online version, 2006. https://ritdml.rit.edu/dspace/handle/1850/2363.

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4

Gelmi, Claudio A. "A novel probabilistic framework for microarray data analysis from fundamental probability models to experimental validation /." Access to citation, abstract and download form provided by ProQuest Information and Learning Company; downloadable PDF file, 177 p, 2007. http://proquest.umi.com/pqdweb?did=1257806411&sid=6&Fmt=2&clientId=8331&RQT=309&VName=PQD.

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5

Au, Siu Kie. "Gene expression profiling of non-small cell lung cancer using cDNA microarrays /." access full-text access abstract and table of contents, 2009. http://libweb.cityu.edu.hk/cgi-bin/ezdb/thesis.pl?phd-bch-b23749490f.pdf.

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Thesis (Ph.D.)--City University of Hong Kong, 2009.<br>"Submitted to Department of Biology and Chemistry in partial fulfillment of the requirements for the degree of Doctor of Philosophy." Includes bibliographical references (leaves 133-147)

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6

Tjaden, Brian C. "Computational methods for transcription anlysis using oligonucleotide microarrays /." Thesis, Connect to this title online; UW restricted, 2003. http://hdl.handle.net/1773/6907.

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7

Jiang, Ying, and 蔣穎. "Studies of gene regulation using microarray data." Thesis, The University of Hong Kong (Pokfulam, Hong Kong), 2004. http://hub.hku.hk/bib/B29976388.

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8

Srivastava, Gyan Prakash Xu Dong. "Genome scale meta analysis of microarrays for biological inferences." Diss., Columbia, Mo. : University of Missouri--Columbia, 2009. http://hdl.handle.net/10355/6841.

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Title from PDF of title page (University of Missouri--Columbia, viewed on April 5, 2010). The entire thesis text is included in the research.pdf file; the official abstract appears in the short.pdf file; a non-technical public abstract appears in the public.pdf file. Dissertation advisor: Dr. Dong Xu. Vita. Includes bibliographical references.

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9

Kirk, Michael School of Biotechnology &amp Biomolecular Science UNSW. "Bioinformatic analyses of microarray experiments on genetic control of gene expression level." Awarded by:University of New South Wales. School of Biotechnology and Biomolecular Science, 2006. http://handle.unsw.edu.au/1959.4/25986.

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The advent of microarray technology, allowing measurement of gene expression levels for thousands of genes in parallel, has made possible experiments designed to investigate the genetic control of variation in gene expression level (described in the literature as ???genetical genomics??? or ???eQTL??? experiments). Published results from these studies, in yeast and in mice, show that genetic variation is an important factor in gene regulation, and furthermore that individual polymorphisms modify the expression level of many genes. The concern of this thesis is the bioinformatic analyses of the

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10

Kannan, Anusha Aiyalu. "Detecting relevant changes in high throughput gene expression data /." Online version of thesis, 2008. http://hdl.handle.net/1850/10832.

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11

Wang, Tao. "Statistical design and analysis of microarray experiments." Connect to this title online, 2005. http://rave.ohiolink.edu/etdc/view?acc%5Fnum=osu1117201363.

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Thesis (Ph. D.)--Ohio State University, 2005.<br>Title from first page of PDF file. Document formatted into pages; contains ix, 146 p.; also includes graphics (some col.) Includes bibliographical references (p. 145-146). Available online via OhioLINK's ETD Center

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12

章明明 and Ming-ming Cheung. "An examination of the regulation of gene expression using microarray and genomic resources." Thesis, The University of Hong Kong (Pokfulam, Hong Kong), 2002. http://hub.hku.hk/bib/B31225809.

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13

Cheung, Ming-ming. "An examination of the regulation of gene expression using microarray and genomic resources /." Hong Kong : University of Hong Kong, 2002. http://sunzi.lib.hku.hk/hkuto/record.jsp?B25205717.

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14

Leader, Debbie. "Methods for incorporating biological information into the statistical analysis of gene expression microarray data." Thesis, University of Auckland, 2009. http://hdl.handle.net/2292/5609.

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Microarray technology has made it possible for researchers to simultaneously measure the expression levels of tens of thousands of genes. It is believed that most human diseases and biological phenomena occur through the interaction of groups of genes that are functionally related. To investigate the feasibility of incorporating functional information and/or constraints (based on biological and technical needs) into the classification process two approaches were examined in this thesis. The first of these approaches investigated the effect of incorporating a pre-filter into the gene sel

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15

Zhao, Hongya. "Statistical analysis of gene expression data in cDNA microarray experiments." HKBU Institutional Repository, 2006. http://repository.hkbu.edu.hk/etd_ra/657.

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16

Rickman, Lisa. "Global regulators of gene expression in Mycobacterium tuberculosis : functional analysis using DNA microarrays." Thesis, University College London (University of London), 2003. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.404827.

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17

Jose, Adarsh. "Gene selection by 1-D discrete wavelet transform for classifying cancer samples using DNA microarray data." Akron, OH : University of Akron, 2009. http://rave.ohiolink.edu/etdc/view?acc%5Fnum=akron1240851642.

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Dissertation (Ph. D.)--University of Akron, Dept. of Chemical and Biomedical Engineering, 2009.<br>"May, 2009." Title from electronic dissertation title page (viewed 8/3/2009) Advisor, Dale H. Mugler; Co-advisor, Zhong-Hui Duan; Committee members, Daniel B. Sheffer; Department Chair, Daniel B. Sheffer; Dean of the College, George K. Haritos; Dean of the Graduate School, George R. Newkome. Includes bibliographical references.

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18

Ribeiro, Adèle Helena. "Análise de expressões gênicas com erros de medida e aplicação em dados reais." Universidade de São Paulo, 2014. http://www.teses.usp.br/teses/disponiveis/45/45134/tde-04082014-163616/.

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Toda medida, desde que feita por um instrumento real, tem uma imprecisão associada. Neste trabalho, abordamos a questão das imprecisões em experimentos de microarranjos de cDNA de dois canais, uma tecnologia que tem sido muito explorada nos últimos anos e que ainda é um importante auxiliar nos estudos de expressões gênicas. Dezenas de milhares de representantes de genes são impressos em uma lâmina de vidro e hibridizados simultaneamente com RNA mensageiro de duas amostras diferentes de células. Essas amostras são marcadas com corantes fluorescentes diferentes e a lâmina, após a hibridização,

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Lepikson-Neto, Jorge 1980. "Analise da expressão genica em diferentes especies de eucalipto utilizando a tecnologia de microarranjos de cDNA." [s.n.], 2008. http://repositorio.unicamp.br/jspui/handle/REPOSIP/314279.

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Orientador: Gonçalo Amarante Guimães Pereira<br>Dissertação (mestrado) - Universidade Estadual de Campinas, Instituto de Biologia<br>Made available in DSpace on 2018-08-12T09:23:56Z (GMT). No. of bitstreams: 1 Lepikson-Neto_Jorge_M.pdf: 1765356 bytes, checksum: c73289c953d58c6b221c2e0927805499 (MD5) Previous issue date: 2008<br>Resumo: Com o intuito de obter informações relevantes para o melhoramento genético do eucalipto para a produção de biomassa, o presente trabalho buscou comparar a expressão dos genes relacionados com a formação e desenvolvimento da madeira em quatro diferentes espécie

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20

Tomascik-Cheeseman, Lisa Marie. "Gene expression profiling in prepubertal and adult male mice using cDNA and oligonucleotide microarrays." Morgantown, W. Va. : [West Virginia University Libraries], 2003. http://etd.wvu.edu/templates/showETD.cfm?recnum=2813.

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Thesis (Ph. D.)--West Virginia University, 2003.<br>Title from document title page. Document formatted into pages; contains xiii, 180 p. : ill. (some col.). Vita. Includes abstract. Includes bibliographical references (p. 138-151).

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21

Xie, Dan, and 謝丹. "Application of high-throughput tissue microarray technology in cancer research." Thesis, The University of Hong Kong (Pokfulam, Hong Kong), 2004. http://hub.hku.hk/bib/B30283619.

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22

Khan, Rishi Lee. "Engineering systems neuroscience modeling of a key adaptive brain control system involved in hypertension /." Access to citation, abstract and download form provided by ProQuest Information and Learning Company; downloadable PDF file, 281 p, 2007. http://proquest.umi.com/pqdweb?did=1362523091&sid=21&Fmt=2&clientId=8331&RQT=309&VName=PQD.

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23

Van, Laar Ryan. "Optimisation of cDNA microarray tumour profiling and molecular analysis of epithelial ovarian cancer /." Connect to thesis, 2005. http://eprints.unimelb.edu.au/archive/00002764.

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24

Rysä, J. (Jaana). "Gene expression profiling in experimental models of cardiac load." Doctoral thesis, University of Oulu, 2008. http://urn.fi/urn:isbn:9789514287664.

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Abstract Cardiac hypertrophy provides an adaptive mechanism to maintain cardiac output in response to increased workload, and although initially beneficial, hypertrophy eventually leads to heart failure, a major cause of morbidity and mortality in Western countries. The hypertrophic response in cardiac myocytes is accompanied by e.g. activation of signal transduction pathways, such as mitogen-activated protein kinases (MAPKs), and complex changes in gene programming. The purpose of this study was to characterize gene expression patterns in experimental models of cardiac load by using high-thro

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25

Goh, Liang. "Computational methods for microarray gene expression analysis through integration and knowledge discovery a thesis submitted to Auckland University of Technology in partial fulfillment of the degree of Doctor of Philosophy, 2005." Full thesis. Abstract, 2005. http://puka2.aut.ac.nz/ait/theses/GohL.pdf.

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26

Yap, Yee-leng Daniel. "Expression profiling of Bacillus subtilis sulfur responsive genes using S-methyl-cysteine (SMeC) as sole sulfur source." Thesis, Click to view the E-thesis via HKUTO, 2006. http://sunzi.lib.hku.hk/hkuto/record/B36602425.

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27

Pashalidis, Stefano. "Análise de expressão gênica de Xylella fastidiosa cultivada em diferentes concentrações de glicose pela técnica de microarrays de DNA." Universidade de São Paulo, 2005. http://www.teses.usp.br/teses/disponiveis/46/46131/tde-21062016-142016/.

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Xylella fastidiosa (Xf) é o agente etiológico causador de doenças em uma grande variedade de cultivos de grande importância econômica, causando a c1orose variegada dos citros, uma das doenças mais danosas à indústria de citros no Brasil. Os genomas de algumas cepas deste fitopatógeno foram completamente seqüenciados promovendo assim estudos funcionais do genoma em larga escala. Neste trabalho nós nos propusemos a investigar o perfil de transcrição de Xf através da técnica microarranjos (no título da dissertação microarrays, mas a partir de agora usaremos microaarranjos) de DNA usando todo o ge

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28

Roberts, Kim G. "Exploration of the ErbB/Ras/MAPK signaling pathway in cancer by gene expression profiling with isoform-specific assay development and microarray technology." Access to citation, abstract and download form provided by ProQuest Information and Learning Company; downloadable PDF file, 169 p, 2007. http://proquest.umi.com/pqdweb?did=1362532051&sid=1&Fmt=2&clientId=8331&RQT=309&VName=PQD.

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29

Towler, James Charles. "Transcriptome activity of human cytomegalovirus (strain Merlin) in fibroblasts, epithelial cells and astrocytes." Thesis, Connect to e-thesis record to view abstract. Move to record for print version, 2007. http://theses.gla.ac.uk/42/.

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Thesis (Ph.D.) - University of Glasgow, 2007.<br>Ph.D. thesis submitted to the Division of Virology, Institute of Biomedical and Life Sciences, University of Glasgow, 2007. Includes bibliographical references. Print version also available.

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30

Kim, Jin-Goel. "Comparative transcriptional profiling of the uterus according to stage of the estrous cycle and pregnancy status in gilts." Diss., Columbia, Mo. : University of Missouri-Columbia, 2007. http://hdl.handle.net/10355/5073.

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Thesis (M.S.)--University of Missouri-Columbia, 2007.<br>The entire dissertation/thesis text is included in the research.pdf file; the official abstract appears in the short.pdf file (which also appears in the research.pdf); a non-technical general description, or public abstract, appears in the public.pdf file. Title from title screen of research.pdf file (viewed on April 9, 2009) Vita. Includes bibliographical references.

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31

Baptista, Juliana Cristina 1979. "Sinalização por manose em Arabidopsis thaliana." [s.n.], 2013. http://repositorio.unicamp.br/jspui/handle/REPOSIP/317158.

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Orientador: Michel Georges Albert Vincentz<br>Tese (doutorado) - Universidade Estadual de Campinas, Instituto de Biologia<br>Made available in DSpace on 2018-08-23T15:00:26Z (GMT). No. of bitstreams: 1 Baptista_JulianaCristina_D.pdf: 14259949 bytes, checksum: d33465f0d6490d2c792f6ee701daa4bd (MD5) Previous issue date: 2013<br>Resumo: O resumo poderá ser visualizado no texto completo da tese digital<br>Abstract: The abstract is available with the full electronic document<br>Doutorado<br>Genetica Vegetal e Melhoramento<br>Doutora em Genética e Biologia Molecular

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32

Begum, Mst Ferdouse. "Gene expression analysis of microarray data : a case study of papilllary thyroid carcinoma data." Virtual Press, 2007. http://liblink.bsu.edu/uhtbin/catkey/1371194.

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Microarray technology allows researchers to monitor the mRNA transcription levels of thousands of genes in parallel which opens the door for more advanced cancer research. This thesis focuses on a case study of papillary thyroid carcinoma data. Fourteen publicly available Affymetrix microarray data sets were used where seven samples were collected from normal thyroid tissue and the remaining seven were collected from papillary thyroid carcinoma tissue. The present study compared the results obtained from three different normalization processes: MAS5.0, RMA and GCRMA in detecting differentially

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Guo, Dongli. "Expression of Wnt signaling targets and their clinico-pathological significance in colorectal neoplasm a tissue microarray study /." Click to view the E-thesis via HKUTO, 2006. http://sunzi.lib.hku.hk/hkuto/record/B38610541.

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34

Roberge, Christopher (Christopher M. ). "Design, manufacture, and application of DNA microarrays to study gene expression phenotypes of lysine-producing Corynebacterium glutamicum." Thesis, Massachusetts Institute of Technology, 2005. http://hdl.handle.net/1721.1/32322.

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Thesis (Ph. D.)--Massachusetts Institute of Technology, Dept. of Chemical Engineering, 2005.<br>Includes bibliographical references (leaves 197-213).<br>Corynebacterium glutamicum partial genome DNA microarrays were constructed that were capable of assaying the transcriptional profile of the genes of pathways involved in central carbon metabolism and lysine biosynthesis. It was found that to ensure arrays of high quality, protocols applying the arrays should include DNase treatment of RNA samples. additional RNA filtration purification steps, and the use of gene specific primers in the formati

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Beaulieu, Julie. "Exploration of high-density oligoarrays as tools to assess substantial equivalence of genetically modified crops." Thesis, McGill University, 2005. http://digitool.Library.McGill.CA:80/R/?func=dbin-jump-full&object_id=97904.

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Since the early 1990s, the concept of substantial equivalence has been a guiding principle of the Canadian Food Inspection Agency and Health Canada's regulatory approach toward products of plant biotechnology destined for the food and livestock feed markets. To assess substantial equivalence in terms of chemical composition, genetically modified (GM) plants are compared to conventional counterparts at the level of macro- and micro-nutrients, allergens and toxicants. Such targeted comparative analyses are limited in their scope and their capacity to detect unintended changes in chemical composi

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36

Schultz, Nikolaus. "Unraveling spermatogenesis: gene expression profiling with DNA microarrays reveals genes critical for germ cell development, fertilization and stem cell maintenance." [S.l. : s.n.], 2004. http://www.diss.fu-berlin.de/2004/178/index.html.

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37

Lorencini, Márcio 1981. "Avaliação global de transcritos associados ao envelhecimento da epiderme humana utilizando microarranjos de DNA = Global evaluation of transcripts associated to human epidermal aging with DNA microarrays." [s.n.], 2014. http://repositorio.unicamp.br/jspui/handle/REPOSIP/317175.

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Orientador: Nilson Ivo Tonin Zanchin<br>Tese (doutorado) - Universidade Estadual de Campinas, Instituto de Biologia<br>Made available in DSpace on 2018-08-24T14:29:49Z (GMT). No. of bitstreams: 1 Lorencini_Marcio_D.pdf: 16348273 bytes, checksum: 4ed299b197892b0d3297e6e6a65d947c (MD5) Previous issue date: 2014<br>Resumo: Com o aumento do tempo de vida da população humana muitas modalidades médicas, incluindo a dermatologia, deparam-se com uma revolução na forma de garantir saúde e qualidade de vida aos pacientes. Em contato com o ambiente externo, a pele representa um órgão no qual as mudança

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38

Hebelka, Tomáš. "Analýza dat z mikročipů pro zjišťování genové exprese." Master's thesis, Vysoké učení technické v Brně. Fakulta informačních technologií, 2010. http://www.nusl.cz/ntk/nusl-235549.

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This work concerns with data analysis of DNA microarrays by using cluster analysis. It explains biological terms - gene expression and DNA microarray. Next, it contains mathematical and informatical description of clustering methods and describes a way to apply these methods to microarrays data. Next, the work contains implementation's detail of clustering methods k-means, DBSCAN and introduces an original clustering algorithm Strom++. Then, description of implementation and application manual follow. Finally, accomplished results are evaluated.

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McWilliam, Iain Stuart. "Development of microarray techniques for the study of gene expression in the European eel (Anguilla anguilla) during silvering and migration to seawater." Thesis, St Andrews, 2008. http://hdl.handle.net/10023/502.

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40

Xue-Franzén, Yongtao. "DNA microarray approaches to understanding the regulation and evolution of gene expression networks." Stockholm : Huddinge : Karolinska institutet ; Södertörns högskola, 2009. http://diss.kib.ki.se/2009/978-91-7409-554-8/.

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41

Brandt, Regine, Robert Grützmann, Andrea Bauer, Ralf Jesenofsky, Jörg Ringel, Matthias Löhr, Christian Pilarsky, and Jörg D. Hoheisel. "DNA microarray analysis of pancreatic malignancies." Saechsische Landesbibliothek- Staats- und Universitaetsbibliothek Dresden, 2014. http://nbn-resolving.de/urn:nbn:de:bsz:14-qucosa-136556.

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Pancreatic ductal adenocarcinoma (PDAC) has an extremely poor prognosis. To improve the prognosis, novel molecular markers and targets for earlier diagnosis and adjuvant and/or neoadjuvant treatment are needed. Recent advances in human genome research and high-throughput molecular technologies make it possible to cope with the molecular complexity of malignant tumors. With DNA array technology, mRNA expression levels of thousand of genes can be measured simultaneously in a single assay. As several studies using microarrays in PDAC have already been published, this review attempts to compare th

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42

Guo, Dongli, and 郭冬麗. "Expression of Wnt signaling targets and their clinico-pathological significance in colorectal neoplasm: a tissuemicroarray study." Thesis, The University of Hong Kong (Pokfulam, Hong Kong), 2006. http://hub.hku.hk/bib/B38610541.

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Mersinias, Vassilios. "DNA microarray-based analysis of gene expression in Streptomyces coelicolor A3(2) and Streptomyces lividans." Thesis, University of Manchester, 2004. https://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.488026.

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Brandt, Regine, Robert Grützmann, Andrea Bauer, Ralf Jesenofsky, Jörg Ringel, Matthias Löhr, Christian Pilarsky, and Jörg D. Hoheisel. "DNA microarray analysis of pancreatic malignancies." Karger, 2004. https://tud.qucosa.de/id/qucosa%3A27711.

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Pancreatic ductal adenocarcinoma (PDAC) has an extremely poor prognosis. To improve the prognosis, novel molecular markers and targets for earlier diagnosis and adjuvant and/or neoadjuvant treatment are needed. Recent advances in human genome research and high-throughput molecular technologies make it possible to cope with the molecular complexity of malignant tumors. With DNA array technology, mRNA expression levels of thousand of genes can be measured simultaneously in a single assay. As several studies using microarrays in PDAC have already been published, this review attempts to compare th

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45

Hasegawa, Suguru. "Genome-wide analysis of gene expression in intestinal-type gastric cancers using a complementary DNA microarray representing 23,040 genes." Kyoto University, 2004. http://hdl.handle.net/2433/147563.

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Mizaku, Alda. "Biomolecular feature selection of colorectal cancer microarray data using GA-SVM hybrid and noise perturbation to address overfitting." Diss., Online access via UMI:, 2009.

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Thesis (M.S.)--State University of New York at Binghamton, Thomas J. Watson School of Engineering and Applied Science, Department of Bioengineering, Biomedical Engineering, 2009.<br>Includes bibliographical references.

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Demirkale, Cumhur Yusuf. "Classical and bayesian mixed model analysis of microarray data for detecting gene expression and DNA differences." [Ames, Iowa : Iowa State University], 2009. http://gateway.proquest.com/openurl?url_ver=Z39.88-2004&rft_val_fmt=info:8ofi/fmt:kev:mtx:dissertation&res_dat=xri:pqdiss&rft_dat=xri:pqdiss:3369826.

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Peralta, Angela. "Generation of A L. Hesperus embryonic cDNA library for the isolation of genes involved in early pattern formation." Scholarly Commons, 2010. https://scholarlycommons.pacific.edu/uop_etds/755.

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While development in flies is well understood, pattem formation and the evolution thereof in arachnids have yet to be clarified. Flies and other metazoans primarily use two families of genes called Hox genes and Pax genes to regulate embryogenesis. Because of the high evolutionary conservation of Hox and Pax proteins, I hypothesize that arachnids also use this system to organize their body pattern. To enable studies of the Westem black widow spider, Latrodectus hesperus, an embryonic eDNA library and a fixation protocol were developed for L. hesperus embryos. The generation of these tools will

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Bednarska, Aleksandra. "Artificial systems for in vitro gene expression." Thesis, Université Paris-Saclay (ComUE), 2015. http://www.theses.fr/2015SACLN016/document.

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L’ARN polymérase dépendante d’ADN (RNAP) est une enzyme responsable de la polymérisation de ribonucleotides dans une séquence d'ARN complémentaire de l'ADN de matrice. La famille de RNAP a plusieurs membres, comme de protéines sous-unité unique (par exemple du bactériophage T7) ou multiple sous-unité (bactériennes et eucaryotes). Transcription de l'ARN - un événement crucial dans l'expression des gènes - varie en fonction de l'origine de RNAP. Bien que le processus de transcription est relativement bien caractérisée, de nombreux éléments restent mal compris, surtout par rapport à la dynamique

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Hrudíková, Radka. "Vytipování a sledování exprese genů ovlivňujících syntézu kyseliny hyaluronové ve streptococcus equi subsp. zooepidemicus pomocí technologie dna čipů a real time PCR." Doctoral thesis, Vysoké učení technické v Brně. Fakulta chemická, 2020. http://www.nusl.cz/ntk/nusl-432922.

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Hyaluronic acid (HA) is an important substance, which is mostly used in pharmaceutical and cosmetic industry. This substance is commonly found in the human body. HA is one of the factors contributing to virulence of microorganisms. Some bacterial strains produce hyaluronic acid in the form of a mucoid capsule that encapsulates the cell to protect bacteria against the immune system of the host organism. One of the main producers is the bacterial strain Streptococcus equi subsp. zooepidemicus. Contipro a.s. uses the strain CO4A to produce hyaluronic acid in large scale. The production strain was

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