Journal articles on the topic 'Complex systems, networks, dynamical models on networks, stochastic models'
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Rozum, Jordan C., Jorge Gómez Tejeda Zañudo, Xiao Gan, Dávid Deritei, and Réka Albert. "Parity and time reversal elucidate both decision-making in empirical models and attractor scaling in critical Boolean networks." Science Advances 7, no. 29 (July 2021): eabf8124. http://dx.doi.org/10.1126/sciadv.abf8124.
Full textMorrison, Megan, and Lai-Sang Young. "Chaotic heteroclinic networks as models of switching behavior in biological systems." Chaos: An Interdisciplinary Journal of Nonlinear Science 32, no. 12 (December 2022): 123102. http://dx.doi.org/10.1063/5.0122184.
Full textSafdari, Hadiseh, Martina Contisciani, and Caterina De Bacco. "Reciprocity, community detection, and link prediction in dynamic networks." Journal of Physics: Complexity 3, no. 1 (February 28, 2022): 015010. http://dx.doi.org/10.1088/2632-072x/ac52e6.
Full textKNOPOFF, D. "ON A MATHEMATICAL THEORY OF COMPLEX SYSTEMS ON NETWORKS WITH APPLICATION TO OPINION FORMATION." Mathematical Models and Methods in Applied Sciences 24, no. 02 (December 12, 2013): 405–26. http://dx.doi.org/10.1142/s0218202513400137.
Full textJirsa, Viktor, and Hiba Sheheitli. "Entropy, free energy, symmetry and dynamics in the brain." Journal of Physics: Complexity 3, no. 1 (February 3, 2022): 015007. http://dx.doi.org/10.1088/2632-072x/ac4bec.
Full textPenfold, Christopher A., and David L. Wild. "How to infer gene networks from expression profiles, revisited." Interface Focus 1, no. 6 (August 10, 2011): 857–70. http://dx.doi.org/10.1098/rsfs.2011.0053.
Full textParham, Paul E., and Neil M. Ferguson. "Space and contact networks: capturing the locality of disease transmission." Journal of The Royal Society Interface 3, no. 9 (December 19, 2005): 483–93. http://dx.doi.org/10.1098/rsif.2005.0105.
Full textWarne, David J., Ruth E. Baker, and Matthew J. Simpson. "Simulation and inference algorithms for stochastic biochemical reaction networks: from basic concepts to state-of-the-art." Journal of The Royal Society Interface 16, no. 151 (February 2019): 20180943. http://dx.doi.org/10.1098/rsif.2018.0943.
Full textCardelli, Luca, Isabel Cristina Perez-Verona, Mirco Tribastone, Max Tschaikowski, Andrea Vandin, and Tabea Waizmann. "Exact maximal reduction of stochastic reaction networks by species lumping." Bioinformatics 37, no. 15 (February 3, 2021): 2175–82. http://dx.doi.org/10.1093/bioinformatics/btab081.
Full textBombieri, Nicola, Silvia Scaffeo, Antonio Mastrandrea, Simone Caligola, Tommaso Carlucci, Franco Fummi, Carlo Laudanna, Gabriela Constantin, and Rosalba Giugno. "SystemC Implementation of Stochastic Petri Nets for Simulation and Parameterization of Biological Networks." ACM Transactions on Embedded Computing Systems 20, no. 4 (June 2021): 1–20. http://dx.doi.org/10.1145/3427091.
Full textKIRKILIONIS, MARKUS, and LUCA SBANO. "AN AVERAGING PRINCIPLE FOR COMBINED INTERACTION GRAPHS — CONNECTIVITY AND APPLICATIONS TO GENETIC SWITCHES." Advances in Complex Systems 13, no. 03 (June 2010): 293–326. http://dx.doi.org/10.1142/s0219525910002669.
Full textStutz, Timothy C., Alfonso Landeros, Jason Xu, Janet S. Sinsheimer, Mary Sehl, and Kenneth Lange. "Stochastic simulation algorithms for Interacting Particle Systems." PLOS ONE 16, no. 3 (March 2, 2021): e0247046. http://dx.doi.org/10.1371/journal.pone.0247046.
Full textAntonacci, Yuri, Laura Astolfi, Giandomenico Nollo, and Luca Faes. "Information Transfer in Linear Multivariate Processes Assessed through Penalized Regression Techniques: Validation and Application to Physiological Networks." Entropy 22, no. 7 (July 1, 2020): 732. http://dx.doi.org/10.3390/e22070732.
Full textБурыкин, Yu Burykin, Даянова, D. Dayanova, Козупица, G. Kozupitsa, Берестин, and D. Berestin. "Compartment-cluster modeling of uncertainties according to determinism." Complexity. Mind. Postnonclassic 3, no. 2 (May 21, 2014): 68–80. http://dx.doi.org/10.12737/5520.
Full textCocucci, Tadeo Javier, Manuel Pulido, Juan Pablo Aparicio, Juan Ruíz, Mario Ignacio Simoy, and Santiago Rosa. "Inference in epidemiological agent-based models using ensemble-based data assimilation." PLOS ONE 17, no. 3 (March 4, 2022): e0264892. http://dx.doi.org/10.1371/journal.pone.0264892.
Full textAntonacci, Yuri, Ludovico Minati, Luca Faes, Riccardo Pernice, Giandomenico Nollo, Jlenia Toppi, Antonio Pietrabissa, and Laura Astolfi. "Estimation of Granger causality through Artificial Neural Networks: applications to physiological systems and chaotic electronic oscillators." PeerJ Computer Science 7 (May 18, 2021): e429. http://dx.doi.org/10.7717/peerj-cs.429.
Full textChoi, Boseung, Yu-Yu Cheng, Selahattin Cinar, William Ott, Matthew R. Bennett, Krešimir Josić, and Jae Kyoung Kim. "Bayesian inference of distributed time delay in transcriptional and translational regulation." Bioinformatics 36, no. 2 (July 26, 2019): 586–93. http://dx.doi.org/10.1093/bioinformatics/btz574.
Full textGrace, Adam W., Dirk P. Kroese, and Werner Sandmann. "Automated State-Dependent Importance Sampling for Markov Jump Processes via Sampling from the Zero-Variance Distribution." Journal of Applied Probability 51, no. 3 (September 2014): 741–55. http://dx.doi.org/10.1239/jap/1409932671.
Full textGrace, Adam W., Dirk P. Kroese, and Werner Sandmann. "Automated State-Dependent Importance Sampling for Markov Jump Processes via Sampling from the Zero-Variance Distribution." Journal of Applied Probability 51, no. 03 (September 2014): 741–55. http://dx.doi.org/10.1017/s0021900200011645.
Full textKaragiannis, Georgios A., and Athanasios D. Panagopoulos. "Dynamic Lognormal Shadowing Framework for the Performance Evaluation of Next Generation Cellular Systems." Future Internet 11, no. 5 (May 2, 2019): 106. http://dx.doi.org/10.3390/fi11050106.
Full textRead, Mark, Paul S. Andrews, Jon Timmis, and Vipin Kumar. "Modelling biological behaviours with the unified modelling language: an immunological case study and critique." Journal of The Royal Society Interface 11, no. 99 (October 6, 2014): 20140704. http://dx.doi.org/10.1098/rsif.2014.0704.
Full textAlameddine, Abdallah K., Frederick Conlin, and Brian Binnall. "An Introduction to the Mathematical Modeling in the Study of Cancer Systems Biology." Cancer Informatics 17 (January 2018): 117693511879975. http://dx.doi.org/10.1177/1176935118799754.
Full textLIN, CHENG-JIAN. "A FUZZY ADAPTIVE LEARNING CONTROL NETWORK WITH ON-LINE STRUCTURE AND PARAMETER LEARNING." International Journal of Neural Systems 07, no. 05 (November 1996): 569–90. http://dx.doi.org/10.1142/s0129065796000567.
Full textPinotti, Francesco, Fakhteh Ghanbarnejad, Philipp Hövel, and Chiara Poletto. "Interplay between competitive and cooperative interactions in a three-player pathogen system." Royal Society Open Science 7, no. 1 (January 2020): 190305. http://dx.doi.org/10.1098/rsos.190305.
Full textGupta, Abhinav, and Pierre F. J. Lermusiaux. "Neural closure models for dynamical systems." Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences 477, no. 2252 (August 2021): 20201004. http://dx.doi.org/10.1098/rspa.2020.1004.
Full textHouse, Thomas, and Matt J. Keeling. "Insights from unifying modern approximations to infections on networks." Journal of The Royal Society Interface 8, no. 54 (June 10, 2010): 67–73. http://dx.doi.org/10.1098/rsif.2010.0179.
Full textWu, Xu, Guo-Ping Jiang, and Xinwei Wang. "A New Model for Complex Dynamical Networks Considering Random Data Loss." Entropy 21, no. 8 (August 15, 2019): 797. http://dx.doi.org/10.3390/e21080797.
Full textUthamacumaran, A. "A Review of Complex Systems Approaches to Cancer Networks." Complex Systems 29, no. 4 (December 15, 2020): 779–835. http://dx.doi.org/10.25088/complexsystems.29.4.779.
Full textRahimi-Majd, M., J. G. Restrepo, and M. N. Najafi. "Stochastic and deterministic dynamics in networks with excitable nodes." Chaos: An Interdisciplinary Journal of Nonlinear Science 33, no. 2 (February 2023): 023134. http://dx.doi.org/10.1063/5.0103806.
Full textAlekseeva, I. V., O. I. Lysenko, and O. M. Tachinina. "Necessary optimality conditions of control of stochastic compound dynamic system in case of full in-formation about state vector." Mathematical machines and systems 4 (2020): 136–47. http://dx.doi.org/10.34121/1028-9763-2020-4-136-147.
Full textArellano-Delgado, A., C. Cruz-Hernández, R. M. López Gutiérrez, and C. Posadas-Castillo. "Outer Synchronization of Simple Firefly Discrete Models in Coupled Networks." Mathematical Problems in Engineering 2015 (2015): 1–14. http://dx.doi.org/10.1155/2015/895379.
Full textMUEZZINOGLU, MEHMET K., IRMA TRISTAN, RAMON HUERTA, VALENTIN S. AFRAIMOVICH, and MIKHAIL I. RABINOVICH. "TRANSIENTS VERSUS ATTRACTORS IN COMPLEX NETWORKS." International Journal of Bifurcation and Chaos 20, no. 06 (June 2010): 1653–75. http://dx.doi.org/10.1142/s0218127410026745.
Full textWittenstein, Timon, Nava Leibovich, and Andreas Hilfinger. "Quantifying biochemical reaction rates from static population variability within incompletely observed complex networks." PLOS Computational Biology 18, no. 6 (June 22, 2022): e1010183. http://dx.doi.org/10.1371/journal.pcbi.1010183.
Full textTanzi, Matteo, and Lai-Sang Young. "Existence of physical measures in some excitation–inhibition networks*." Nonlinearity 35, no. 2 (December 22, 2021): 889–915. http://dx.doi.org/10.1088/1361-6544/ac3eb6.
Full textXinghua, Hu, and Zhang Yu. "A Parameters Calibration Method in Simulated Complex Traffic Network." Open Construction and Building Technology Journal 9, no. 1 (October 27, 2015): 262–65. http://dx.doi.org/10.2174/1874836801509010262.
Full textHalevi, Y., and A. Ray. "Performance Analysis of Integrated Communication and Control System Networks." Journal of Dynamic Systems, Measurement, and Control 112, no. 3 (September 1, 1990): 365–71. http://dx.doi.org/10.1115/1.2896153.
Full textROSSELLÓ, JOSEP L., VINCENT CANALS, ANTONI MORRO, and ANTONI OLIVER. "HARDWARE IMPLEMENTATION OF STOCHASTIC SPIKING NEURAL NETWORKS." International Journal of Neural Systems 22, no. 04 (July 25, 2012): 1250014. http://dx.doi.org/10.1142/s0129065712500141.
Full textAsllani, Malbor, Renaud Lambiotte, and Timoteo Carletti. "Structure and dynamical behavior of non-normal networks." Science Advances 4, no. 12 (December 2018): eaau9403. http://dx.doi.org/10.1126/sciadv.aau9403.
Full textNiu, Haoyu, YangQuan Chen, and Bruce J. West. "Why Do Big Data and Machine Learning Entail the Fractional Dynamics?" Entropy 23, no. 3 (February 28, 2021): 297. http://dx.doi.org/10.3390/e23030297.
Full textKolářová, Edita. "Applications of second order stochastic integral equations to electrical networks." Tatra Mountains Mathematical Publications 63, no. 1 (June 1, 2015): 163–73. http://dx.doi.org/10.1515/tmmp-2015-0028.
Full textNikolic, Sasa S., Dragan S. Antic, Nikola B. Dankovic, Aleksandra A. Milovanovic, Darko B. Mitic, Miroslav B. Milovanovic, and Petar S. Djekic. "Generalized Quasi-Orthogonal Functional Networks Applied in Parameter Sensitivity Analysis of Complex Dynamical Systems." Elektronika ir Elektrotechnika 28, no. 4 (August 24, 2022): 19–26. http://dx.doi.org/10.5755/j02.eie.31110.
Full textPLESA, TOMISLAV, RADEK ERBAN, and HANS G. OTHMER. "Noise-induced mixing and multimodality in reaction networks." European Journal of Applied Mathematics 30, no. 5 (September 18, 2018): 887–911. http://dx.doi.org/10.1017/s0956792518000517.
Full textBone, Rebecca A., and Jason R. Green. "Optimizing dynamical functions for speed with stochastic paths." Journal of Chemical Physics 157, no. 22 (December 14, 2022): 224101. http://dx.doi.org/10.1063/5.0125479.
Full textAbrevaya, Germán, Guillaume Dumas, Aleksandr Y. Aravkin, Peng Zheng, Jean-Christophe Gagnon-Audet, James Kozloski, Pablo Polosecki, et al. "Learning Brain Dynamics With Coupled Low-Dimensional Nonlinear Oscillators and Deep Recurrent Networks." Neural Computation 33, no. 8 (July 26, 2021): 2087–127. http://dx.doi.org/10.1162/neco_a_01401.
Full textHu, Yiwen, and Markus J. Buehler. "Deep language models for interpretative and predictive materials science." APL Machine Learning 1, no. 1 (March 1, 2023): 010901. http://dx.doi.org/10.1063/5.0134317.
Full textGhahramani, Zoubin, and Geoffrey E. Hinton. "Variational Learning for Switching State-Space Models." Neural Computation 12, no. 4 (April 1, 2000): 831–64. http://dx.doi.org/10.1162/089976600300015619.
Full textANDREYEV, YU V., A. S. DMITRIEV, D. A. KUMINOV, L. O. CHUA, and C. W. WU. "1-D MAPS, CHAOS AND NEURAL NETWORKS FOR INFORMATION PROCESSING." International Journal of Bifurcation and Chaos 06, no. 04 (April 1996): 627–46. http://dx.doi.org/10.1142/s021812749600031x.
Full textHasani, Ramin, Mathias Lechner, Alexander Amini, Lucas Liebenwein, Aaron Ray, Max Tschaikowski, Gerald Teschl, and Daniela Rus. "Closed-form continuous-time neural networks." Nature Machine Intelligence 4, no. 11 (November 15, 2022): 992–1003. http://dx.doi.org/10.1038/s42256-022-00556-7.
Full textHanel, Rudolf, Manfred Pöchacker, and Stefan Thurner. "Living on the edge of chaos: minimally nonlinear models of genetic regulatory dynamics." Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences 368, no. 1933 (December 28, 2010): 5583–96. http://dx.doi.org/10.1098/rsta.2010.0267.
Full textWANG, HONGCHUN, KEQING HE, BING LI, and JINHU LÜ. "ON SOME RECENT ADVANCES IN COMPLEX SOFTWARE NETWORKS: MODELING, ANALYSIS, EVOLUTION AND APPLICATIONS." International Journal of Bifurcation and Chaos 22, no. 02 (February 2012): 1250024. http://dx.doi.org/10.1142/s0218127412500241.
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