Journal articles on the topic 'Causal profiling'
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Pourghassemi, Behnam, Ardalan Amiri Sani, and Aparna Chandramowlishwaran. "Only Relative Speed Matters." ACM SIGMETRICS Performance Evaluation Review 48, no. 3 (March 5, 2021): 113–19. http://dx.doi.org/10.1145/3453953.3453979.
Full textHill, Steven M., Nicole K. Nesser, Katie Johnson-Camacho, Mara Jeffress, Aimee Johnson, Chris Boniface, Simon E. F. Spencer, et al. "Context Specificity in Causal Signaling Networks Revealed by Phosphoprotein Profiling." Cell Systems 4, no. 1 (January 2017): 73–83. http://dx.doi.org/10.1016/j.cels.2016.11.013.
Full textGupta, Saumya, Aparna Radhakrishnan, Pandu Raharja-Liu, Gen Lin, Lars M. Steinmetz, Julien Gagneur, and Himanshu Sinha. "Temporal Expression Profiling Identifies Pathways Mediating Effect of Causal Variant on Phenotype." PLOS Genetics 11, no. 6 (June 3, 2015): e1005195. http://dx.doi.org/10.1371/journal.pgen.1005195.
Full textGutteridge, Alex, J. Michael Rukstalis, Daniel Ziemek, Mark Tié, Lin Ji, Rebeca Ramos-Zayas, Nancy A. Nardone, et al. "Novel Pancreatic Endocrine Maturation Pathways Identified by Genomic Profiling and Causal Reasoning." PLoS ONE 8, no. 2 (February 13, 2013): e56024. http://dx.doi.org/10.1371/journal.pone.0056024.
Full textPourghassemi, Behnam, Ardalan Amiri Sani, and Aparna Chandramowlishwaran. "What-If Analysis of Page Load Time in Web Browsers Using Causal Profiling." Proceedings of the ACM on Measurement and Analysis of Computing Systems 3, no. 2 (June 19, 2019): 1–23. http://dx.doi.org/10.1145/3341617.3326142.
Full textPourghassemi, Behnam, Ardalan Amiri Sani, and Aparna Chandramowlishwaran. "What-If Analysis of Page Load Time in Web Browsers Using Causal Profiling." ACM SIGMETRICS Performance Evaluation Review 47, no. 1 (December 17, 2019): 87–88. http://dx.doi.org/10.1145/3376930.3376986.
Full textRubin, Adam J., Kevin R. Parker, Ansuman T. Satpathy, Yanyan Qi, Beijing Wu, Alvin J. Ong, Maxwell R. Mumbach, et al. "Coupled Single-Cell CRISPR Screening and Epigenomic Profiling Reveals Causal Gene Regulatory Networks." Cell 176, no. 1-2 (January 2019): 361–76. http://dx.doi.org/10.1016/j.cell.2018.11.022.
Full textKhademi, Aria, and Vasant Honavar. "Algorithmic Bias in Recidivism Prediction: A Causal Perspective (Student Abstract)." Proceedings of the AAAI Conference on Artificial Intelligence 34, no. 10 (April 3, 2020): 13839–40. http://dx.doi.org/10.1609/aaai.v34i10.7192.
Full textLi, Weilong, Jan Baumbach, Martin J. Larsen, Afsaneh Mohammadnejad, Jesper Lund, Kaare Christensen, Lene Christiansen, and Qihua Tan. "Differential long noncoding RNA profiling of BMI in twins." Epigenomics 12, no. 17 (September 2020): 1531–41. http://dx.doi.org/10.2217/epi-2020-0033.
Full textLegrand, Carine, and Francesca Tuorto. "RiboVIEW: a computational framework for visualization, quality control and statistical analysis of ribosome profiling data." Nucleic Acids Research 48, no. 2 (November 28, 2019): e7-e7. http://dx.doi.org/10.1093/nar/gkz1074.
Full textAristizabal, Maria J., Ina Anreiter, Thorhildur Halldorsdottir, Candice L. Odgers, Thomas W. McDade, Anna Goldenberg, Sara Mostafavi, et al. "Biological embedding of experience: A primer on epigenetics." Proceedings of the National Academy of Sciences 117, no. 38 (October 17, 2019): 23261–69. http://dx.doi.org/10.1073/pnas.1820838116.
Full textOdhams, Christopher A., Deborah S. Cunninghame Graham, and Timothy J. Vyse. "Profiling RNA-Seq at multiple resolutions markedly increases the number of causal eQTLs in autoimmune disease." PLOS Genetics 13, no. 10 (October 23, 2017): e1007071. http://dx.doi.org/10.1371/journal.pgen.1007071.
Full textNurnberg, Sylvia T., Marie A. Guerraty, Robert C. Wirka, H. Shanker Rao, Milos Pjanic, Scott Norton, Felipe Serrano, et al. "Genomic profiling of human vascular cells identifies TWIST1 as a causal gene for common vascular diseases." PLOS Genetics 16, no. 1 (January 9, 2020): e1008538. http://dx.doi.org/10.1371/journal.pgen.1008538.
Full textOwen, Jonathan P., Helen C. Rees, Ben C. Maddison, Linda A. Terry, Leigh Thorne, Roy Jackman, Garry C. Whitelam, and Kevin C. Gough. "Molecular Profiling of Ovine Prion Diseases by Using Thermolysin-Resistant PrPSc and Endogenous C2 PrP Fragments." Journal of Virology 81, no. 19 (July 25, 2007): 10532–39. http://dx.doi.org/10.1128/jvi.00640-07.
Full textChen, Junhui, Yuhuan Meng, Jinghui Zhou, Min Zhuo, Fei Ling, Yu Zhang, Hongli Du, and Xiaoning Wang. "Identifying Candidate Genes for Type 2 Diabetes Mellitus and Obesity through Gene Expression Profiling in Multiple Tissues or Cells." Journal of Diabetes Research 2013 (2013): 1–9. http://dx.doi.org/10.1155/2013/970435.
Full textSimon, Daniel I. "Platelet Transcriptional Profiling and Atherothrombosis." Blood 122, no. 21 (November 15, 2013): SCI—54—SCI—54. http://dx.doi.org/10.1182/blood.v122.21.sci-54.sci-54.
Full textJaeger, Savina, Junxia Min, Florian Nigsch, Miguel Camargo, Janna Hutz, Allen Cornett, Stephen Cleaver, Alan Buckler, and Jeremy L. Jenkins. "Causal Network Models for Predicting Compound Targets and Driving Pathways in Cancer." Journal of Biomolecular Screening 19, no. 5 (February 11, 2014): 791–802. http://dx.doi.org/10.1177/1087057114522690.
Full textBhattacharya, Soumyaroop, and Thomas J. Mariani. "Array of hope: expression profiling identifies disease biomarkers and mechanism." Biochemical Society Transactions 37, no. 4 (July 22, 2009): 855–62. http://dx.doi.org/10.1042/bst0370855.
Full textTonui, Ronald, Joel Masanga, Remmy Kasili, Steven Runo, and Amos Alakonya. "Identification of maize lethal necrosis disease causal viruses in maize and suspected alternative hosts through small RNA profiling." Journal of Phytopathology 168, no. 7-8 (May 22, 2020): 439–50. http://dx.doi.org/10.1111/jph.12908.
Full textFallik, Seth Wyatt. "The methodological struggles of racial profiling research: a causal question that automobile stop data has yet to answer." Criminal Justice Studies 32, no. 1 (December 17, 2018): 32–49. http://dx.doi.org/10.1080/1478601x.2018.1558057.
Full textNemoto, Kentaro, Kazuhisa Yanagi, Masato Aketagawa, D. Kanda, I. Yoshida, and M. Uchidate. "A Study on Surface Material Measures for Areal Surface Texture Measuring Instruments: Measuring Conditions for the Areal Profiling." Key Engineering Materials 381-382 (June 2008): 241–44. http://dx.doi.org/10.4028/www.scientific.net/kem.381-382.241.
Full textGilbert, Jessica R., Mkael Symmonds, Michael G. Hanna, Raymond J. Dolan, Karl J. Friston, and Rosalyn J. Moran. "Profiling neuronal ion channelopathies with non-invasive brain imaging and dynamic causal models: Case studies of single gene mutations." NeuroImage 124 (January 2016): 43–53. http://dx.doi.org/10.1016/j.neuroimage.2015.08.057.
Full textAndo, Tatsuya, Miyuki Suguro, Takeshi Kobayashi, Masao Seto, and Hiroyuki Honda. "Selection of causal gene sets for lymphoma prognostication from expression profiling and construction of prognostic fuzzy neural network models." Journal of Bioscience and Bioengineering 96, no. 2 (January 2003): 161–67. http://dx.doi.org/10.1016/s1389-1723(03)90119-8.
Full textGandal, Michael J., Jillian R. Haney, Neelroop N. Parikshak, Virpi Leppa, Gokul Ramaswami, Chris Hartl, Andrew J. Schork, et al. "Shared molecular neuropathology across major psychiatric disorders parallels polygenic overlap." Science 359, no. 6376 (February 8, 2018): 693–97. http://dx.doi.org/10.1126/science.aad6469.
Full textBeekman, Chapman, Zhenze Jiang, Brian M. Suzuki, Jonathan M. Palmer, Daniel L. Lindner, Anthony J. O’Donoghue, Giselle M. Knudsen, and Richard J. Bennett. "Characterization of PdCP1, a serine carboxypeptidase from Pseudogymnoascus destructans, the causal agent of White-nose Syndrome." Biological Chemistry 399, no. 12 (November 27, 2018): 1375–88. http://dx.doi.org/10.1515/hsz-2018-0240.
Full textKulyté, Agné, Silvia Lorente-Cebrián, Hui Gao, Niklas Mejhert, Thorhallur Agustsson, Peter Arner, Mikael Rydén, and Ingrid Dahlman. "MicroRNA profiling links miR-378 to enhanced adipocyte lipolysis in human cancer cachexia." American Journal of Physiology-Endocrinology and Metabolism 306, no. 3 (February 1, 2014): E267—E274. http://dx.doi.org/10.1152/ajpendo.00249.2013.
Full textReeve, Erica, Take Naseri, Tim Martyn, Caroline Bollars, and Anne-Marie Thow. "Developing a context-specific nutrient profiling system for food policy in Samoa." Health Promotion International 34, no. 6 (November 2, 2018): e94-e105. http://dx.doi.org/10.1093/heapro/day089.
Full textKeiper, F. J., M. S. Haque, M. J. Hayden, and R. F. Park. "Genetic Diversity in Australian Populations of Puccinia graminis f. sp. avenae." Phytopathology® 96, no. 1 (January 2006): 96–104. http://dx.doi.org/10.1094/phyto-96-0096.
Full textFarup, Per G., and Maria G. Maseng. "Are Faecal Microbiota Analyses on Species-Level Suitable Clinical Biomarkers? A Pilot Study in Subjects with Morbid Obesity." Microorganisms 9, no. 3 (March 23, 2021): 664. http://dx.doi.org/10.3390/microorganisms9030664.
Full textPan, Yunzhi, Weidan Pu, Xudong Chen, Xiaojun Huang, Yan Cai, Haojuan Tao, Zhiming Xue, et al. "Morphological Profiling of Schizophrenia: Cluster Analysis of MRI-Based Cortical Thickness Data." Schizophrenia Bulletin 46, no. 3 (January 4, 2020): 623–32. http://dx.doi.org/10.1093/schbul/sbz112.
Full textZenil, Hector, Narsis A. Kiani, Ming-mei Shang, and Jesper Tegnér. "Algorithmic Complexity and Reprogrammability of Chemical Structure Networks." Parallel Processing Letters 28, no. 01 (March 2018): 1850005. http://dx.doi.org/10.1142/s0129626418500056.
Full textPuig, Oscar, I.-Ming Wang, Ping Cheng, Pris Zhou, Sophie Roy, Doris Cully, Mette Peters, Yair Benita, John Thompson, and Tian-Quan Cai. "Transcriptome profiling and network analysis of genetically hypertensive mice identifies potential pharmacological targets of hypertension." Physiological Genomics 42A, no. 1 (September 2010): 24–32. http://dx.doi.org/10.1152/physiolgenomics.00010.2010.
Full textHall, Ashley, Sara Bandres-Ciga, Monica Diez-Fairen, John P. Quinn, and Kimberley J. Billingsley. "Genetic Risk Profiling in Parkinson’s Disease and Utilizing Genetics to Gain Insight into Disease-Related Biological Pathways." International Journal of Molecular Sciences 21, no. 19 (October 4, 2020): 7332. http://dx.doi.org/10.3390/ijms21197332.
Full textCao, Song, Yun Liu, Wenting Sun, Li Zhao, Lin Zhang, Xinkui Liu, and Tian Yu. "Genome-Wide Expression Profiling of Anoxia/Reoxygenation in Rat Cardiomyocytes Uncovers the Role of MitoKATPin Energy Homeostasis." Oxidative Medicine and Cellular Longevity 2015 (2015): 1–14. http://dx.doi.org/10.1155/2015/756576.
Full textDjami-Tchatchou, Arnaud Thierry, Lerato Bame Tsalaemang Matsaunyane, Chimdi Mang Kalu, and Khayalethu Ntushelo. "Gene expression and evidence of coregulation of the production of some metabolites of chilli pepper inoculated with Pectobacterium carotovorum ssp. carotovorum." Functional Plant Biology 46, no. 12 (2019): 1114. http://dx.doi.org/10.1071/fp18244.
Full textZhu, Mengyan, Yong Li, Cheng Ding, Jiaqi Wang, Yangyang Ma, Zhao Li, Xiaoyan Zhang, and Ping Wang. "Proteomic Profiling Change and Its Implies in the Early Mycosis Fungoides (MF) Using Isobaric Tags for Relative and Absolute Quantification (iTRAQ)." BioMed Research International 2020 (November 23, 2020): 1–13. http://dx.doi.org/10.1155/2020/9237381.
Full textRajasekaran, Namakkal S., Matthew A. Firpo, Brett A. Milash, Robert B. Weiss, and Ivor J. Benjamin. "Global expression profiling identifies a novel biosignature for protein aggregation R120GCryAB cardiomyopathy in mice." Physiological Genomics 35, no. 2 (October 2008): 165–72. http://dx.doi.org/10.1152/physiolgenomics.00297.2007.
Full textZeiss, Dylan R., Msizi I. Mhlongo, Fidele Tugizimana, Paul A. Steenkamp, and Ian A. Dubery. "Metabolomic Profiling of the Host Response of Tomato (Solanum lycopersicum) Following Infection by Ralstonia solanacearum." International Journal of Molecular Sciences 20, no. 16 (August 14, 2019): 3945. http://dx.doi.org/10.3390/ijms20163945.
Full textNarain, Niven, Michael Kiebish, Vivek Vishnudas, Vladimir Tolstikov, Gregory Miller, Stephane Gesta, Elder Granger, and Rangaprasad Sarangarajan. "CSAO-1. Interrogative Biology: Unraveling insights into causal disease drivers by use of a dynamic systems biology and Bayesian AI to identify the intersect of disease and healthy signatures." Neuro-Oncology Advances 3, Supplement_2 (July 1, 2021): ii1. http://dx.doi.org/10.1093/noajnl/vdab070.001.
Full textCelik, Mustafa, Alper Şen, İsmail Koyuncu, and Ataman Gönel. "Plasma-Free Amino Acid Profiling of Nasal Polyposis Patients." Combinatorial Chemistry & High Throughput Screening 22, no. 9 (January 1, 2020): 657–62. http://dx.doi.org/10.2174/1386207322666190920110324.
Full textBelcastro, Vincenzo, Carine Poussin, Stephan Gebel, Carole Mathis, Walter K. Schlage, Rosemarie B. Lichtner, Sibille Quadt-Humme, Sandra Wagner, Julia Hoeng, and Manuel C. Peitsch. "Systematic Verification of Upstream Regulators of a Computable Cellular Proliferation Network Model on Non-Diseased Lung Cells Using a Dedicated Dataset." Bioinformatics and Biology Insights 7 (January 2013): BBI.S12167. http://dx.doi.org/10.4137/bbi.s12167.
Full textDrew, J. E., D. K. Mercer, C. Mayer, A. J. Farquharson, P. C. Morrice, J. R. Arthur, and G. G. Duthie. "Oxidative stress in colon tissue induced by vitamin E depletion." Biochemical Society Transactions 32, no. 6 (October 26, 2004): 979–81. http://dx.doi.org/10.1042/bst0320979.
Full textWalcott, Farzana L., Christina M. Annunziata, Eduardo M. Sotomayor, and Antonio Tito Fojo. "Effect of metformin chemoprevention on metabolomics profiles in Li-Fraumeni Syndrome (LFS)." Journal of Clinical Oncology 35, no. 15_suppl (May 20, 2017): 1556. http://dx.doi.org/10.1200/jco.2017.35.15_suppl.1556.
Full textZhu, Hong, Long-Fei Wu, Xing-Bo Mo, Xin Lu, Hui Tang, Xiao-Wei Zhu, Wei Xia, et al. "Rheumatoid arthritis–associated DNA methylation sites in peripheral blood mononuclear cells." Annals of the Rheumatic Diseases 78, no. 1 (October 8, 2018): 36–42. http://dx.doi.org/10.1136/annrheumdis-2018-213970.
Full textPeters, Susan, Douglas Walker, Gary Miller, Marc Chadeau-Hyam, Paolo Vineis, Valentina Gallo, and Roel Vermeulen. "O6E.4 Metabolome and exposome profiling: new opportunities to study risk factors for parkinson’s disease." Occupational and Environmental Medicine 76, Suppl 1 (April 2019): A60.1—A60. http://dx.doi.org/10.1136/oem-2019-epi.161.
Full textGuan, P., S. F. Wong, J. Q. Lim, C. C. Y. Ng, P. L. Soong, C. Q. X. Sim, C. K. Ong, et al. "Mutational Signatures in Mandibular Ameloblastoma Correlate with Smoking." Journal of Dental Research 98, no. 6 (March 27, 2019): 652–58. http://dx.doi.org/10.1177/0022034519837248.
Full textYong, Hannah E. J., and Shiao-Yng Chan. "Current approaches and developments in transcript profiling of the human placenta." Human Reproduction Update 26, no. 6 (October 12, 2020): 799–840. http://dx.doi.org/10.1093/humupd/dmaa028.
Full textTian, Yanli, Yuqiang Zhao, Xuezi Chen, Yuanfeng Dai, Wenjun Zhao, Baishi Hu, and R. R. Walcott. "Evidence for a Novel Phylotype of Pseudomonas syringae Causing Bacterial Leaf Blight of Cantaloupe in China." Plant Disease 101, no. 10 (October 2017): 1746–52. http://dx.doi.org/10.1094/pdis-01-17-0110-re.
Full textRhee, Eugene P., and Robert E. Gerszten. "Metabolomics and Cardiovascular Biomarker Discovery." Clinical Chemistry 58, no. 1 (January 1, 2012): 139–47. http://dx.doi.org/10.1373/clinchem.2011.169573.
Full textWu, Jiaojiao, Jing Gao, Weishuai Bi, Jiaojie Zhao, Xiumei Yu, Zaifeng Li, Daqun Liu, Bo Liu, and Xiaodong Wang. "Genome-Wide Expression Profiling of Genes Associated with the Lr47-Mediated Wheat Resistance to Leaf Rust (Puccinia triticina)." International Journal of Molecular Sciences 20, no. 18 (September 11, 2019): 4498. http://dx.doi.org/10.3390/ijms20184498.
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