Relevant bibliographies by topics / Burkholderia fungorum

Academic literature on the topic 'Burkholderia fungorum'

Author: Grafiati
Published: 11 March 2023

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Journal articles on the topic "Burkholderia fungorum"

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Zhang, Wei, and Morris Reichlin. "A Possible Link between Infection with Burkholderia Bacteria and Systemic Lupus Erythematosus Based on Epitope Mimicry." Clinical and Developmental Immunology 2008 (2008): 1–7. http://dx.doi.org/10.1155/2008/683489.

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We previously demonstrated that purified polyclonal and monoclonal anti-dsDNA antibodies bind a 15-mer peptide ASPVTARVLWKASHV in ELISA and Dot blot. This 15-mer peptide partial sequence ARVLWKASH shares similarity with burkholderia bacterial cytochrome B 561 partial sequence ARVLWRATH. In this study, we show that purified anti-dsDNA antibodies react with burkholderia fungorum bacterial cell lysates in Western blot. We used anti-dsDNA antibodies to make an anti-dsDNA antibodies affinity column and used this column to purify the burkholderia fungorum bacterial protein. Purified anti-dsDNA antibodies bind specifically to purified bacterial antigen and purified bacterial antigen blocked the anti-dsDNA antibodies binding to dsDNA antigen. Sera with anti-dsDNA antibodies bind specifically to purified bacterial antigen. We obtained protein partial sequence of RAGTDEGFG which is shared with burkholderia bacterial transcription regulator protein sequence. Sera with anti-dsDNA antibodies bind to RAGTDEGFG peptide better than control groups. These data support our hypothesis that the origin of anti-dsDNA antibodies in SLE may be associated with burkholderia bacterial infection.
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Marx, Christopher J., Jonathan A. Miller, Ludmila Chistoserdova, and Mary E. Lidstrom. "Multiple Formaldehyde Oxidation/Detoxification Pathways in Burkholderia fungorum LB400." Journal of Bacteriology 186, no. 7 (April 1, 2004): 2173–78. http://dx.doi.org/10.1128/jb.186.7.2173-2178.2004.

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ABSTRACT Burkholderia species are free-living bacteria with a versatile metabolic lifestyle. The genome of B. fungorum LB400 is predicted to encode three different pathways for formaldehyde oxidation: an NAD-linked, glutathione (GSH)-independent formaldehyde dehydrogenase; an NAD-linked, GSH-dependent formaldehyde oxidation system; and a tetrahydromethanopterin-methanofuran-dependent formaldehyde oxidation system. The other Burkholderia species for which genome sequences are available, B. mallei, B. pseudomallei, and B. cepacia, are predicted to contain only the first two of these pathways. The roles of the three putative formaldehyde oxidation pathways in B. fungorum LB400 have been assessed via knockout mutations in each of these pathways, as well as in all combinations of knockouts. The resulting mutants have the expected loss of enzyme activities and exhibit defects of varying degrees of severity during growth on choline, a formaldehyde-producing substrate. Our data suggest that all three pathways are involved in formaldehyde detoxification and are functionally redundant under the tested conditions.
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de Oliveira-Longatti, Silvia Maria, Pedro Martins de Sousa, Leandro Marciano Marra, Paulo Ademar Avelar Ferreira, and Fatima Maria de Souza Moreira. "Burkholderia fungorum promotes common bean growth in a dystrophic oxisol." Annals of Microbiology 65, no. 4 (January 15, 2015): 1825–32. http://dx.doi.org/10.1007/s13213-014-1020-y.

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Khoei, Nazanin Seyed, Marco Andreolli, Silvia Lampis, Giovanni Vallini, and Raymond J. Turner. "A comparison of the response of twoBurkholderia fungorumstrains grown as planktonic cells versus biofilm to dibenzothiophene and select polycyclic aromatic hydrocarbons." Canadian Journal of Microbiology 62, no. 10 (October 2016): 851–60. http://dx.doi.org/10.1139/cjm-2016-0160.

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In natural environments, bacteria often exist in close association with surfaces and interfaces by establishing biofilms. Here, we report on the ability of Burkholderia fungorum strains DBT1 and 95 to survive in high concentrations of hydrocarbons, and we compare their growth as a biofilm vs. planktonic cells. The 2 compounds tested were dibenzothiophene (DBT) and a mixture of naphthalene, phenanthrene, and pyrene (5:2:1) as representative compounds of thiophenes and polycyclic aromatic hydrocarbons (PAHs), respectively. The results showed that both strains were able to degrade DBT and to survive in the presence of up to a 2000 mg·L−1concentration of this compound both as a biofilm and as free-living cells. Moreover, B. fungorum DBT1 showed reduced tolerance towards the mixed PAHs (2000 mg·L−1naphthalene, 800 mg·L−1phenanthrene, and 400 mg·L−1pyrene) both as a biofilm and as free-living cells. Conversely, biofilms of B. fungorum 95 enhanced resistance against these toxic compounds compared with planktonic cells (P < 0.05). Visual observation through confocal laser scanning microscopy showed that exposure of biofilms to DBT and PAHs altered their structure: high concentrations of DBT triggered an aggregation of biofilm cells. These findings provide new perspectives on the effectiveness of using DBT-degrading bacterial strains in bioremediation of hydrocarbon-contaminated sites.
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Rusch, Antje, Shaer Islam, Pratixa Savalia, and Jan P. Amend. "Burkholderia insulsa sp. nov., a facultatively chemolithotrophic bacterium isolated from an arsenic-rich shallow marine hydrothermal system." International Journal of Systematic and Evolutionary Microbiology 65, Pt_1 (January 1, 2015): 189–94. http://dx.doi.org/10.1099/ijs.0.064477-0.

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Enrichment cultures inoculated with hydrothermally influenced nearshore sediment from Papua New Guinea led to the isolation of an arsenic-tolerant, acidophilic, facultatively aerobic bacterial strain designated PNG-AprilT. Cells of this strain were Gram-stain-negative, rod-shaped, motile and did not form spores. Strain PNG-AprilT grew at temperatures between 4 °C and 40 °C (optimum 30–37 °C), at pH 3.5 to 8.3 (optimum pH 5–6) and in the presence of up to 2.7 % NaCl (optimum 0–1.0 %). Both arsenate and arsenite were tolerated up to concentrations of at least 0.5 mM. Metabolism in strain PNG-AprilT was strictly respiratory. Heterotrophic growth occurred with O2 or nitrate as electron acceptors, and aerobic lithoautotrophic growth was observed with thiosulfate or nitrite as electron donors. The novel isolate was capable of N2-fixation. The respiratory quinones were Q-8 and Q-7. Phylogenetically, strain PNG-AprilT belongs to the genus Burkholderia and shares the highest 16S rRNA gene sequence similarity with the type strains of Burkholderia fungorum (99.8 %), Burkholderia phytofirmans (98.8 %), Burkholderia caledonica (98.4 %) and Burkholderia sediminicola (98.4 %). Differences from these related species in several physiological characteristics (lipid composition, carbohydrate utilization, enzyme profiles) and DNA–DNA hybridization suggested the isolate represents a novel species of the genus Burkholderia , for which we propose the name Burkholderia insulsa sp. nov. The type strain is PNG-AprilT ( = DSM 28142T = LMG 28183T).
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Andreolli, Marco, Silvia Lampis, Marika Poli, Gabor Gullner, Borbala Biró, and Giovanni Vallini. "Endophytic Burkholderia fungorum DBT1 can improve phytoremediation efficiency of polycyclic aromatic hydrocarbons." Chemosphere 92, no. 6 (July 2013): 688–94. http://dx.doi.org/10.1016/j.chemosphere.2013.04.033.

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King, Gary M. "Molecular and Culture-Based Analyses of Aerobic Carbon Monoxide Oxidizer Diversity†." Applied and Environmental Microbiology 69, no. 12 (December 2003): 7257–65. http://dx.doi.org/10.1128/aem.69.12.7257-7265.2003.

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ABSTRACT Isolates belonging to six genera not previously known to oxidize CO were obtained from enrichments with aquatic and terrestrial plants. DNA from these and other isolates was used in PCR assays of the gene for the large subunit of carbon monoxide dehydrogenase (coxL). CoxL and putative coxL fragments were amplified from known CO oxidizers (e.g., Oligotropha carboxidovorans and Bradyrhizobium japonicum), from novel CO-oxidizing isolates (e.g., Aminobacter sp. strain COX, Burkholderia sp. strain LUP, Mesorhizobium sp. strain NMB1, Stappia strains M4 and M8, Stenotrophomonas sp. strain LUP, and Xanthobacter sp. strain COX), and from several well-known isolates for which the capacity to oxidize CO is reported here for the first time (e.g., Burkholderia fungorum LB400, Mesorhizobium loti, Stappia stellulata, and Stappia aggregata). PCR products from several taxa, e.g., O. carboxidovorans, B. japonicum, and B. fungorum, yielded sequences with a high degree (>99.6%) of identity to those in GenBank or genome databases. Aligned sequences formed two phylogenetically distinct groups. Group OMP contained sequences from previously known CO oxidizers, including O. carboxidovorans and Pseudomonas thermocarboxydovorans, plus a number of closely related sequences. Group BMS was dominated by putative coxL sequences from genera in the Rhizobiaceae and otherα -Proteobacteria. PCR analyses revealed that many CO oxidizers contained two coxL sequences, one from each group. CO oxidation by M. loti, for which whole-genome sequencing has revealed a single BMS-group putative coxL gene, strongly supports the notion that BMS sequences represent functional CO dehydrogenase proteins that are related to but distinct from previously characterized aerobic CO dehydrogenases.
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Andreolli, Marco, Silvia Lampis, Elena Zenaro, Mirja Salkinoja-Salonen, and Giovanni Vallini. "Burkholderia fungorum DBT1: a promising bacterial strain for bioremediation of PAHs-contaminated soils." FEMS Microbiology Letters 319, no. 1 (March 31, 2011): 11–18. http://dx.doi.org/10.1111/j.1574-6968.2011.02259.x.

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De Felice, Antonia, Flaviana Di Lorenzo, Kirstin Scherlach, Claudia Ross, Alba Silipo, Christian Hertweck, and Antonio Molinaro. "Structural investigation of the lipopolysaccharide O-chain isolated from Burkholderia fungorum strain DSM 17061." Carbohydrate Research 433 (October 2016): 31–35. http://dx.doi.org/10.1016/j.carres.2016.07.008.

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Piccoli, Stefano, Marco Andreolli, Alejandro Giorgetti, Fabio Zordan, Silvia Lampis, and Giovanni Vallini. "Identification of aldolase and ferredoxin reductase within the dbt operon of Burkholderia fungorum DBT1." Journal of Basic Microbiology 54, no. 5 (May 17, 2013): 464–69. http://dx.doi.org/10.1002/jobm.201200408.

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Dissertations / Theses on the topic "Burkholderia fungorum"

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Strunk, Niko. "Der Abbau von Fluorbenzol und seinen Homologen durch Burkholderia fungorum FLU 100." [S.l. : s.n.], 2007. http://nbn-resolving.de/urn:nbn:de:bsz:93-opus-36403.

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Strunk, Niko [Verfasser]. "Der Abbau von Fluorbenzol und seinen Homologen durch Burkholderia fungorum FLU 100 : biologische Grundlagen und Anwendung in der Abluftreinigung / vorgelegt von Niko Strunk." 2008. http://d-nb.info/990914909/34.

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