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1

Lakhdar, Mebarki, Dakhali Abir, and Mezouri Fatna. "Plant growth-promoting endophytic bacteria isolated from Launaea arborescens (characterization and molecular identification)." Journal of Agriculture and Applied Biology 4, no. 1 (April 25, 2023): 71–82. http://dx.doi.org/10.11594/jaab.04.01.08.

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The present investigation aimed to assess endophytic bacteria's capacity to stimulate plant development. Eight endophytic bacterial strains were isolated from the root of Launaea arborescens (Batt.), native medicinal plant growing spontaneously in the region of Bechar (south-west Algeria). The eight strains were tested for their effects on seed germination and plant growth of Triticum aestivum L. The results showed that all strains had positive effects on wheat seeds germination. The seeds inoculation of wheat by endophytic bacteria improves morphological parameters of the seedling (fresh and dry weight of plant, root and stem elongation). 16S rRNA gene sequencing was used to identify the powerful strain, it was found as Brevibacillus brevis. This one was found positive for many of the plant growth promoting attributes like ammonia production and azote fixing. In addition, it was identified as resistant to azithromycine during antibiotic sensitivity test and It could tolerate up to 0.9 M of NaCl. Additionally, Brevibacillus brevis was identified as resistant in the herbicide and the insecticide susceptibility test. Results suggest that this endophyte is a strong candidate for use as plant growth-promoting inoculants, to assist in lowering the amount of chemicals used in agricultural practices and enhance nutrient absorption and stress resistance in plant species.
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2

Wani, Parvaze, Akinware Olamide, Idris Wasiu, Nusrat Rafi, and Shazia Wahid. "Effect of Brevibacillus brevis OZF6 on Reduction of Chromium (VI) and Pea Growth." Advances in Research 9, no. 3 (January 10, 2017): 1–10. http://dx.doi.org/10.9734/air/2017/31986.

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3

Prasad, P., Tanuja Singh, and S. Bedi. "Polyphasic Characterization of a Potential Novel Cellulolytic Bacterium Brevibacillus Brevis Strain St-2." JOURNAL OF ADVANCES IN BIOTECHNOLOGY 4, no. 1 (January 30, 2014): 319–26. http://dx.doi.org/10.24297/jbt.v4i1.5005.

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The tremendous commercial potential of cellulases in a variety of applications remains the driving force for research in this area. The present study was aimed at isolation and screening of promising cellulolytic strains from locally collected soil samples. A promising cellulose degrading bacterial strain designated as St-2 was isolated from agricultural field. Optimization of fermentation media ingredients and environmental factors were done for optimizing growth of the      strain which facilitates effective cellulase production. St-2 showed luxuriant growth on sucrose, lactose, mannitol and inositol whereas the growth was moderate on dextrose and fructose. The strain was able to grow in a wide range of pH (5-11) and temperature (4-45 ˚C) and was tolerant to up to 6% (w/v) of NaCl concentration in the medium. The results indicate wide spectrum adaptability of the strain to variable pH, temperatures and saline concentrations that makes it an advantageous organism to survive in the fluctuating environmental conditions. The optimum pH and temperature for enzyme production were 7 (with 2.11 U/ml CMCase activities and 2.22 U/ml FPase activities) and 37˚C (with 1.73 U/ml CMCase activities and 1.92 U/ml FPase activities), respectively. The morphological and biochemical characteristics of the strain were consistent with those of the genus Brevibacillus. Analysis of the 16S rRNA gene sequence of strain St-2 showed a similarity score of 99% with Brevibacillusbrevis(GeneBank Accession No. AB271756) having BLAST score ranging between 821 to 827 bits.
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Duraisamy, Senbagam, Fazal Husain, Senthilkumar Balakrishnan, Aswathy Sathyan, Prabhu Subramani, Prahalathan Chidambaram, Selvaraj Arokiyaraj, Wahidah H. Al-Qahtani, Jothiramalingam Rajabathar, and Anbarasu Kumarasamy. "Phenotypic Assessment of Probiotic and Bacteriocinogenic Efficacy of Indigenous LAB Strains from Human Breast Milk." Current Issues in Molecular Biology 44, no. 2 (February 1, 2022): 731–49. http://dx.doi.org/10.3390/cimb44020051.

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Breast milk is the combination of bioactive compounds and microflora that promote newborn’s proper growth, gut flora, and immunity. Thus, it is always considered the perfect food for newborns. Amongst their bioactives, probiotic communities—especially lactic acid bacteria (LAB)—are characterized from breast milk over the first month of parturition. In this study, seven LAB were characterized phenotypically and genotypically as Levilactobacillus brevis BDUMBT08 (MT673657), L. gastricus BDUMBT09 (MT774596), L. paracasei BDUMBT10 (MT775430), L. brevis BDUMBT11 (MW785062), L. casei BDUMBT12 (MW785063), L. casei BDUMBT13 (MW785178), and Brevibacillus brevis M2403 (MK371781) from human breast milk. Their tolerance to lysozyme, acid, bile, gastric juice, pancreatic juice, and NaCl and potential for mucoadhesion, auto-aggregation, and co-aggregation with pathogens are of great prominence in forecasting their gut colonizing ability. They proved their safety aspects as they were negative for virulence determinants such as hemolysis and biofilm production. Antibiogram of LAB showed their sensitivity to more than 90% of the antibiotics tested. Amongst seven LAB, three isolates (L. brevis BDUMBT08 and BDUMBT11, and L. gatricus BDUMBT09) proved their bacteriocin producing propensity. Although the seven LAB isolates differed in their behavior, their substantial probiotic properties with safety could be taken as promising probiotics for further studies to prove their in vivo effects, such as health benefits, in humans.
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5

Simarmata, Rumella, Tiwit Widowati, Tirta Kumala Dewi, Sylvia J. R. Lekatompessy, and Sarjiya Antonius. "Isolation, Screening and Identification of Plant Growth-Promoting Endophytic Bacteria from Theobroma cacao." Biosaintifika: Journal of Biology & Biology Education 12, no. 2 (August 1, 2020): 155–62. http://dx.doi.org/10.15294/biosaintifika.v12i2.21280.

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Cacao (Theobrama cacao) is one of the main plantation commodities in Indonesia which has an important role for the national economy. The low productivity of cacao plants in Indonesia is due to the condition of old plants, pests and diseases attacks which affect the quality of the fruit and decrease the plant’s productivity. The objective of this study was to isolate and identify of endophytic bacteria from stem, flower, leaf and fruit of T. cacao by using 16S rRNA gene as genetic marker. Twenty seven endophytic bacterial isolates were collected from local plantation in Yogyakarta area. From this study, 8 endophytic bacterial strains exhibited the higher PGP traits. The isolates produced Indole Acetic Acid level by 0.3 to 5.21 ppm/hour. All of isolates had nitrogen fixation activity but have not phosphate solubilization activity. Among them, isolates CSDT 4 and CGKBH 4 showed promising potential as PGP bacteria. Based on the 16S rRNA gene sequences, those bacterial strains were identified as Brevibacillus brevis (CSDT 4) and Pantoea sp. (CGKBH 4). We propose that the B. brevis and Pantoea sp. which is reported for the first time for their PGP potential in cacao, exerts its beneficial effects on cacao crop through combined of activities. The potential PGP bacteria from the Cacao plant was used to make a specific bio-fertilizer formula for the Cacao plant, because of the different needs and condition that every plant requires.
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6

Zhao, Zhenjun, Lingling Zhang, Yougen Lou, Yan Luo, Xianchun Hu, Xueli Pan, Huawei Wu, Jianjie Li, Huiling Mei, and Xinghui Li. "Inhibitory Effect of Polypeptides Produced by Brevibacillus brevis on Ochratoxigenic Fungi in the Process of Pile-Fermentation of Post-Fermented Tea." Foods 11, no. 20 (October 17, 2022): 3243. http://dx.doi.org/10.3390/foods11203243.

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Contamination by ochratoxigenic fungi and its prevention during the pile-fermentation of post-fermented tea have always been a concern. The present study aimed to elucidate the anti-fungal effect and mechanism of polypeptides produced by B. brevis DTM05 (isolated from post-fermented tea) on ochratoxigenic fungi, and to to evaluate their use in the pile-fermentation process of post-fermented tea. The results showed that polypeptides (produced by B. brevis DTM05) with a strong antifungal effect against A. carbonarius H9 mainly had a molecular weight between 3 and 5 kDa. The Fourier-transform infrared spectra of this polypeptide extract showed that it was a mixture consisting mainly of polypeptides and small amounts of lipids and other carbohydrates. The polypeptide extracts significantly inhibited the growth of A. carbonarius H9, and its minimum inhibitory concentration (MIC) was 1.6 mg/L, which significantly reduced the survival rate of spores. The polypeptides also effectively controlled the occurrence and ochratoxin A (OTA) production of A. carbonarius H9 on the tea matrix. The lowest concentration of polypeptides that significantly inhibited the growth of A. carbonarius H9 on the tea matrix was 3.2 mg/L. The enhancement of the fluorescence staining signal in the mycelium and conidiospore showed that the polypeptides with a concentration of more than 1.6 mg/L increased the permeability of the mycelium membrane and conidial membrane of A. carbonarius H9. The significant increase in the extracellular conductivity of mycelia suggested the outward leakage of intracellular active substances, and also further indicated an increase in cell membrane permeability. Polypeptides with a concentration of 6.4 mg/L significantly down-regulated the expression level of the polyketide synthase gene related to OTA production (acpks) in A. carbonarius H9, which may be the fundamental reason why polypeptides affect OTA production. In conclusion, reasonable use of the polypeptides produced by B. brevis can destroy the structural integrity of the cell membrane, make the intracellular active substances leak outward, accelerate the death of fungal cells and down-regulate the expression level of the polyketide synthase gene in A. carbonarius; thus, they can effectively control the contamination of ochratoxigenic fungi and OTA production during the pile-fermentation of the post-fermented tea.
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7

Sondang, Y., R. Siregar, and K. Anty. "Identification of endophytic and rhizosphere bacteria in rice (Oryza sativa L.) in the experimental field at Payakumbuh State Agriculture Polytechnic, West Sumatra, Indonesia." IOP Conference Series: Earth and Environmental Science 883, no. 1 (October 1, 2021): 012085. http://dx.doi.org/10.1088/1755-1315/883/1/012085.

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Abstract The decrease of soil fertility and fewer soil microorganisms will lower crop production, particularly rice, thus threatening the national food security program. This study is (a) to isolate and identify the bacteria in the endophytic and rhizosphere of rice plants (b) to study the bacteria from the endophytic and rhizosphere of rice plants which potentially stimulate plant growth. The experiment was carried out at the Laboratory of Food Crop Cultivation at Payakumbuh State Agriculture Polytechnic, Limapuluh Kota Regency, West Sumatra for four months. The sampling method was carried out by random sampling at rice planting in the Payakumbuh State Agriculture Polytechnic Experimental Field. Endophytic bacteria were taken from the root tissue of rice plants, and rhizosphere bacteria were taken from a layer of soil around rice roots. Isolation of bacteria was carried out by using the pour plate and scratchplate methods. Four bacteria were identified using the 16S rRNA sequencing method. The identification results showed that in the rice root tissue found the bacteria Chromobacterium rhizoryzae and Brevibacillus brevis. In the rice rhizosphere, Bacillus pseudomycoides and Bacillus thuringiensis are found. Bacteria are dominated by the Bacillus genera which can stimulate plant growth.
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8

Mojgani, Naheed, Niloofar Razmgah, Mohammad Amir Karimi Torshizi, and Mohammad Reza Sanjabi. "Effects of three Bacillus specious on hatchability, growth performance and serum biochemistry in Japanese quails fed diet contaminated with Aflatoxin B1." Acta Scientiarum. Animal Sciences 42 (June 8, 2020): e50184. http://dx.doi.org/10.4025/actascianimsci.v42i1.50184.

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In total, 240 one-day–old Japanese quails (Coturnix Coturnix Japonica) allocated at random to 6 treatments with 4 replicates and 10 birds in each. Treatments used were: 1) Negative control (without any additives or AFB1); 2) Positive control (basal diet + 2.5 ppm AFB1; 2); 3) TA008 (positive control + 108 cfu/ml Bacillus. megaterium TA008); 4) TA049 (positive control + 108 cfu mL-1 Bacillus. subtilis TA049); 5) TA010 (positive control+ 108 cfu mL-1 Brevibacillus brevis TA010) and 6) P (positive control + 2.5 g kg-1 Polysorb® in feed). Hatchability and embryonic mortality were significantly influenced by additives and AFB1 (p < 0.05). Birds fed TA008 improved 12 % hatchability and reduced 10 % embryonic mortality in compared to positive control (p < 0.05). Weight gain and feed conversion ratio did not affected by treatments (p > 0.05). Feed intake was significantly improved in birds feeding by TA008 at 0-21 days (p < 0.05). There were significant differences on relative weights of carcass, gizzard and proventriculus among treatments (p < 0.05). Serum total protein, albumin, cholesterol, glucose, HDL, globulin and uric acid were significantly affected by treatments (p < 0.05). These results showed that the inclusion of bacillus megaterium as potential probiotic into contaminated diets could improve the adverse effects of AFB1 in Japanese quails.
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9

Che, Jianmei, Shaowen Ye, Bo Liu, Yuanyuan Deng, Qianqian Chen, Cibin Ge, Guohong Liu, and Jieping Wang. "Effects of Brevibacillus brevis FJAT-1501-BPA on growth performance, faecal microflora, faecal enzyme activities and blood parameters of weaned piglets." Antonie van Leeuwenhoek 109, no. 12 (August 24, 2016): 1545–53. http://dx.doi.org/10.1007/s10482-016-0756-8.

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10

Fouda, Amr, Ahmed M. Eid, Albaraa Elsaied, Ehab F. El-Belely, Mohammed G. Barghoth, Ehab Azab, Adil A. Gobouri, and Saad El-Din Hassan. "Plant Growth-Promoting Endophytic Bacterial Community Inhabiting the Leaves of Pulicaria incisa (Lam.) DC Inherent to Arid Regions." Plants 10, no. 1 (January 1, 2021): 76. http://dx.doi.org/10.3390/plants10010076.

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In this study, 15 bacterial endophytes linked with the leaves of the native medicinal plant Pulicaria incisa were isolated and identified as Agrobacterium fabrum, Acinetobacter radioresistant, Brevibacillus brevis, Bacillus cereus, Bacillus subtilis, Paenibacillus barengoltzii, and Burkholderia cepacia. These isolates exhibited variant tolerances to salt stress and showed high efficacy in indole-3-acetic acid (IAA) production in the absence/presence of tryptophan. The maximum productivity of IAA was recorded for B. cereus BI-8 and B. subtilis BI-10 with values of 117 ± 6 and 108 ± 4.6 μg mL−1, respectively, in the presence of 5 mg mL−1 tryptophan after 10 days. These two isolates had a high potential in phosphate solubilization and ammonia production, and they showed enzymatic activities for amylase, protease, xylanase, cellulase, chitinase, and catalase. In vitro antagonistic investigation showed their high efficacy against the three phytopathogens Fusarium oxysporum, Alternaria alternata, and Pythium ultimum, with inhibition percentages ranging from 20% ± 0.2% to 52.6% ± 0.2% (p ≤ 0.05). Therefore, these two endophytic bacteria were used as bio-inoculants for maize seeds, and the results showed that bacterial inoculations significantly increased the root length as well as the fresh and dry weights of the roots compared to the control plants. The Zea mays plant inoculated with the two endophytic strains BI-8 and BI-10 significantly improved (p ≤ 0.05) the growth performance as well as the nutrient uptake compared with an un-inoculated plant.
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11

Ghazaei, Ciamak. "Effect of Rhamnolipids on Pathogenicity Characteristics of Microorganisms in Organic Compost." Research in Molecular Medicine 9, no. 1 (January 25, 2021): 39–50. http://dx.doi.org/10.32598/rmm.9.1.5.

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Background: Rhamnolipids are hydrophilic glycolipids, often classified as biosurfactants. They are produced by different bacterial species. Rhamnolipids are extensively studied in biological research because of their interesting features like antimicrobial, antifungal, and antiviral activities. Materials and Methods: To study the antimicrobial effect of rhamnolipid, we conducted a crosssectional study on the eight different pathogenic bacterial strains from November 2019 to June 2020. These bacterial strains were isolated from the organic compost. Both disk diffusion and broth microdilution methods were used to evaluate the inhibitory effects of rhamnolipids on these pathogenic bacteria. Also, protease and amylase enzyme activities were evaluated in these eight bacterial isolates. Results: For Bacillus stearothermophilus, within the area of 31.5 mm, no growth was observed, hence proving the inhibitory effect of rhamnolipid. After calculating the minimum inhibitory (MIC) and minimum lethal concentrations (MLC) for each bacterial strain, it has been found that the studied bacteria were more susceptible to rhamnolipids than most of the antibiotics. Strains were also quantified for their enzymatic activity of proteases and amylases. The bacterial strains of Bacillus stearothermophilus, Brevibacillus brevis, Bacillus licheniformis, and Bordetella petrii showed maximum protease activity. Whereas Escherichia coli, Enterococcus faecalis, Enterobacter aerogenes, and Pseudomonas aeruginosa showed high amylase activity. Conclusion: Rhamnolipids can be used as a potential antimicrobial agent for treatment of infections.
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Sireesha, Y., and R. Velazhahan. "Biological control of downy mildew of maize caused by Peronosclerospora sorghi under environmentally controlled conditions." Journal of Applied and Natural Science 8, no. 1 (March 1, 2016): 279–83. http://dx.doi.org/10.31018/jans.v8i1.786.

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Downy mildew disease, caused by Peronosclerospora sorghi, is one of the most serious diseases of maize. The disease is currently managed by seed treatment with metalaxyl fungicides. However, problems regarding environmental pollution resulting from the use of fungicides and development of fungicide resistance within populations of P. sorghi are of increasing concern. Assuming that biological control by means of using antagonistic microorganisms may be an alternative for the management of this disease, the efficacy of biocontrol agents viz., Bacillus subtilis G1, Bacillus amyloliquefaciens B2, Brevibacillus brevis 57 and Pseudomonas fluorescens Pf1 for the management of downy mildew of maize and for promoting plant growth was evaluated. The results indicated that seed treatment with B. subtilis G1 and B. amyloliquefaciens B2 significantly (P = 0.05) increased the germination percentage and seedling vigour of maize as assessed by roll towel method. Among them, B. subtilis G1 was the most effective and recorded 9% and 31% increases in germination percentage and seedling vigour of maize respectively, as compared to the control. A talc- based powder formulation of B. subtilis G1 when applied through seed at the rate of 10 g/kg reduced the downy mildew incidence up to 54% under greenhouse conditions. Results of this study suggest that B. subtilis G1 is a promising bioagent for the management of downy mildew of maize and for promoting plant growth. This antagonist could be further exploited for commercial scale up for ecofriendly management of downy mildew of maize under localized climatic conditions.
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13

Fouda, Amr, Saad El-Din Hassan, Ahmed M. Eid, Mohamed A. Awad, Khalid Althumayri, Naglaa Fathi Badr, and Mohammed F. Hamza. "Endophytic bacterial strain, Brevibacillus brevis-mediated green synthesis of copper oxide nanoparticles, characterization, antifungal, in vitro cytotoxicity, and larvicidal activity." Green Processing and Synthesis 11, no. 1 (January 1, 2022): 931–50. http://dx.doi.org/10.1515/gps-2022-0080.

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Abstract The biomass filtrate containing various metabolites of endophytic bacterial strain, Brevibacillus brevis PI-5 was used as a biocatalyst for reducing and stabilizing copper oxide nanoparticles (CuO-NPs). UV-Vis spectroscopy, Fourier transform infrared, transmission electron microscopy, scanning electron microscopy with energy-dispersive X-ray (SEM-EDX), X-ray diffraction, and X-ray photoelectron spectroscopy were used for CuO-NPs characterization. A spherical, well-dispersed, and crystallographic structure with sizes of 2–28 nm was formed. The SEM-EDX confirmed the presence of Cu and O with weight percentages of 27.62% and 48.88%, respectively. The biological activities including antifungal, anticancer, and larvicidal of synthesized CuO-NPs were assessed using the fungal radial growth inhibition, MTT assay method, and mortality percentages, respectively. The obtained data showed that the CuO-NPs exhibit high activity in a dose-dependent manner. The growth of three phytopathogenic fungi, Fusarium oxysporum, Alternaria alternata, and Aspergillus niger was decreased by percentages of 64.5% ± 4.1%, 62.9% ± 0.3%, and 70.2% ± 2.3%, respectively at 300 µg·mL–1. Also, various clinical Candida spp. were successfully inhibited with varied zones of inhibition and minimum inhibitory concentration values in ranges of 6.25–50 µg·mL–1. The in vitro cytotoxicity exhibits target-orientation to breast cancer cells (T47D) at low concentration compared to normal cells (HFB4) with IC50 values of 122.3 ± 5.4 and 229.9 ± 5.7 μg·mL–1, respectively. The mortality percentages of I, II, III, and IV instar larvae of Culex antennatus were 60% ± 1.4%, 43.1% ± 1.1%, 36.2% ± 1%, and 32.1% ± 0.9%, at 10 mg·L–1 and increased to 86.9% ± 2.1%, 68.1% ± 1.7%, 64.4% ± 1.9%, and 53.1% ± 1.4% at 50 mg·L–1, respectively.
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14

Babar, Tauseef K., Travis R. Glare, John G. Hampton, Mark R. H. Hurst, and Josefina O. Narciso. "Isolation, Purification, and Characterisation of a Phage Tail-Like Bacteriocin from the Insect Pathogenic Bacterium Brevibacillus laterosporus." Biomolecules 12, no. 8 (August 20, 2022): 1154. http://dx.doi.org/10.3390/biom12081154.

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The Gram-positive and spore-forming bacterium Brevibacillus laterosporus (Bl) belongs to the Brevibacillus brevis phylogenetic cluster. Isolates of the species have demonstrated pesticidal potency against a wide range of invertebrate pests and plant diseases. Two New Zealand isolates, Bl 1821L and Bl 1951, are under development as biopesticides for control of diamondback moth and other pests. However, due to the often-restricted growth of these endemic isolates, production can be an issue. Based on the previous work, it was hypothesised that the putative phages might be involved. During investigations of the cause of the disrupted growth, electron micrographs of crude lysate of Bl 1821L showed the presence of phages’ tail-like structures. A soft agar overlay method with PEG 8000 precipitation was used to differentiate between the antagonistic activity of the putative phage and phage tail-like structures (bacteriocins). Assay tests authenticated the absence of putative phage activity. Using the same method, broad-spectrum antibacterial activity of Bl 1821L lysate against several Gram-positive bacteria was found. SDS-PAGE of sucrose density gradient purified and 10 kD MWCO concentrated lysate showed a prominent protein band of ~48 kD, and transmission electron microscopy revealed the presence of polysheath-like structures. N-terminal sequencing of the ~48 kD protein mapped to a gene with weak predicted amino acid homology to a Bacillus PBSX phage-like element xkdK, the translated product of which shared >90% amino acid similarity to the phage tail-sheath protein of another Bl published genome, LMG15441. Bioinformatic analysis also identified an xkdK homolog in the Bl 1951 genome. However, genome comparison of the region around the xkdK gene between Bl 1821L and Bl 1951 found differences including two glycine rich protein encoding genes which contain imperfect repeats (1700 bp) in Bl 1951, while a putative phage region resides in the analogous Bl 1821L region. Although comparative analysis of the genomic organisation of Bl 1821L and Bl 1951 PBSX-like region with the defective phages PBSX, PBSZ, and PBP 180 of Bacillus subtilis isolates 168 and W23, and Bacillus phage PBP180 revealed low amino acids similarity, the genes encode similar functional proteins in similar arrangements, including phage tail-sheath (XkdK), tail (XkdO), holin (XhlB), and N-acetylmuramoyl-l-alanine (XlyA). AMPA analysis identified a bactericidal stretch of 13 amino acids in the ~48 kD sequenced protein of Bl 1821L. Antagonistic activity of the purified ~48 kD phage tail-like protein in the assays differed remarkably from the crude lysate by causing a decrease of 34.2% in the number of viable cells of Bl 1951, 18 h after treatment as compared to the control. Overall, the identified inducible phage tail-like particle is likely to have implications for the in vitro growth of the insect pathogenic isolate Bl 1821L.
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Vivas, A., J. M. Barea, and R. Azcón. "Brevibacillus brevis Isolated from Cadmium- or Zinc-Contaminated Soils Improves in Vitro Spore Germination and Growth of Glomus mosseae under High Cd or Zn Concentrations." Microbial Ecology 49, no. 3 (April 2005): 416–24. http://dx.doi.org/10.1007/s00248-004-0044-4.

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Zhang, Shouan, M. S. Reddy, Nancy Kokalis-Burelle, Larry W. Wells, Stevan P. Nightengale, and Joseph W. Kloepper. "Lack of Induced Systemic Resistance in Peanut to Late Leaf Spot Disease by Plant Growth-Promoting Rhizobacteria and Chemical Elicitors." Plant Disease 85, no. 8 (August 2001): 879–84. http://dx.doi.org/10.1094/pdis.2001.85.8.879.

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A disease assay was optimized for late leaf spot disease of peanut using Cercosporidium per-sonatum in the greenhouse, and this assay was used in attempts to elicit induced systemic resistance using strains of plant growth-promoting rhizobacteria (PGPR) and chemical elicitors. Nineteen strains of spore-forming bacilli PGPR, including strains of Paenibacillus macerans, Brevibacillus brevis, Bacillus laterosporus, B. subtilis, B. pumilus, B. amyloliquefaciens, B. sphaericus, B. cereus, and B. pasteurii, which previously elicited systemic disease control activity on other crops, were evaluated in greenhouse assays. Seven PGPR strains elicited significant disease reduction in a single experiment; however, none repeated significant protection achieved in the greenhouse assay, while significant protection consistently occurred with the fungicide chlorothalonil (Bravo). In other greenhouse trials, neither stem injections of C. personatum nor foliar sprays of chemicals, including salicylic acid, sodium salicylate, isonicotinic acid, or benzo[1,2,3]thiadiazole-7-carbothioc acid S-methyl ester (Actigard), which elicit systemic acquired resistance on other crops, elicited significant disease protection. In contrast, foliar sprays with DL-β-amino-n-butyric acid (BABA), which is an elicitor of localized acquired resistance, resulted in significantly less late leaf spot disease in one of two tests. Combination treatments of four PGPR strains with BABA in the greenhouse did not significantly protect peanut from late leaf spot. Field trials conducted over two growing seasons indicated that none of the 19 PGPR strains, applied as seed treatments at two concentrations, significantly reduced late leaf spot disease. The same chemical elicitors tested in the greenhouse, including BABA, did not elicit significant disease protection. Some combinations of four PGPR and BABA significantly reduced the disease at one but not at two sample times. Collectively, these results suggest that late leaf spot resistance in peanut is not systemically inducible in the same manner as is resistance to diseases in other crops by PGPR and chemical inducers.
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Li, Yanlin, Jixiang Chen, Yonggang Wang, Dan Ma, and Wenhong Rui. "The effects of the recombinant YeaZ of Vibrio harveyi on the resuscitation and growth of soil bacteria in extreme soil environment." PeerJ 8 (December 21, 2020): e10342. http://dx.doi.org/10.7717/peerj.10342.

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Numerous bacteria entered the viable but non-culturable state due to the stresses of dry and salt in soils. YeaZ of Gram-negative bacteria is a resuscitation promoting factor (Rpf) homologous protein could resuscitate bacteria of natural environment in VBNC state. To investigate the promoting effect of YeaZ on the isolation of viable but non-culturable (VBNC) bacteria from soil samples in extreme environments, the recombinant YeaZ of Vibrio harveyi was prepared and added to the soil samples from volcanic soil and saline soil in Northwest China. The study has shown that YeaZ can promote the recovery and growth of soil microorganisms, and the number of cultivable bacteria in volcanic and saline soil has increased from 0.17 × 103 and 2.03 × 103 cfu⋅ml−1 to 1.00 × 103 and 5.55 × 103 cfu⋅ml−1, respectively. The 16S rDNA gene sequencing and phylogenetic analysis showed that YeaZ played an essential role in the increase of composition and diversity of bacteria. A total of 13 bacterial strains were isolated from the volcanic soil samples, which belong to phyla Actinobacteria, Firmicutes and Gamma-proteobacteria. Four species, including Ornithinimicrobium kibberense, Agrococcus citreus, Stenotrophomonas rhizophila and Pseudomonas zhaodongensis were found in the control group, while Micrococcus antarcticus, Kocuria rose, Salinibacterium xinjiangense, Planococcus antarcticus, Ornithinimicrobium kibberense and Pseudomonas zhaodongensis were isolated from the treatment groups (addition of YeaZ). Twenty-one strains were isolated from the saline soil samples, including eight species from the control group and thirteen species from the treatment groups, among which nine species were only found, including Bacillus oceanisediminis, Brevibacillus brevis, Paenibacillus xylanilyticus, Microbacterium maritypicum, B. subtilis, B. alcalophilus, B. niabensis, Oceanimonas doudoroffii and Zobellella taiwanensis. The results suggest that addition of YeaZ to soil samples can promote the recovery of VBNC. This method has the implications for the discovery of VBNC bacteria that have potential environmental functions.
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Maiti, Smarajit, Tanmoy Samanta, Sumit Sahoo, and Sudipta Roy. "The Dual Carboxymethyl Cellulase and Gelatinase Activities of a Newly Isolated Protein from Brevibacillus agri ST15c10 Confer Reciprocal Regulations in Substrate Utilization." Journal of Molecular Microbiology and Biotechnology 27, no. 6 (2017): 319–31. http://dx.doi.org/10.1159/000479109.

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A protein showing endoglucanase-peptidase activity was prepared from a newly isolated bacterium (ST15c10). We identified ST15c10 as <i>Brevibacillus agri</i> based on electron-microscopic images and its 16S-rDNA sequence (GenBank accession No. HM446043), which exhibits 98.9% sequence identity to <i>B. agri </i>(KZ17)/<i>B. formosus </i>(DSM-9885T)/<i>B. brevis</i>. The enzyme was purified to homogeneity and gave a single peak during high-performance liquid chromatography on a Seralose 6B-150 gel-matrix/C-18 column. MALDI-TOF mass-spectrometry and bioinformatics studies revealed significant similarity to M42-aminopeptidases/endoglucanases of the CelM family. These enzymes are found in all <i>Brevibacillus</i> strains for which the genome sequence is known. ST15c10 grows optimally on carboxymethyl cellulose (CMC)-gelatin (40°C/pH 8-9), and also shows strong growth/carboxymethyl cellulase (CMCase) activity in submerged bagasse fermentation. The purified enzyme also functions as endoglucanase with solid bagasse/rice straw. Its CMCase activity (optimal at pH 5.6 and 60°C/K<sub>m</sub> = 35.5 µ<smlcap>M</smlcap>/V<sub>max</sub> = 1,024U) was visualized by zymography on a CMC-polyacrylamide gel, which provided a strong band of approximately 70 kDa. The purified enzyme also showed strong peptidase (gelatinase) activity (pH 7.2/40°C during zymography on 6-12% gelatin/1% gelatin-PAGE (at approx. 70 kDa). The CMCase activity is inhibited by the metal ions Mn/Cu/Fe/Co (50%), Hg/KMnO<sub>4</sub> (100%), and by glucose or lactose (50-75%; all at 1 m<smlcap>M</smlcap>). The observed dose/time-dependent inhibition by Hg ions could be prevented with 2-mercaptoethanol. A comparison of the <i>B. agri</i> endoglucanase-aminopeptidase (ELK43520; 350 aa) with other members of the M42-family revealed the conservation of active-site residues Cys256/Cys260, which were previously identified as metal-binding sites. Regulation of the endoglucanase activity probably occurs via metal binding-triggered changes in the redox state of the enzyme. Studies on this type of enzyme are of high importance for basic scientific and industrial research.
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19

Wekesa, Tofick B., Vitalis W. Wekesa, Justus M. Onguso, Eliud N. Wafula, and Ndinda Kavesu. "Isolation and Characterization of Bacillus velezensis from Lake Bogoria as a Potential Biocontrol of Fusarium solani in Phaseolus vulgaris L." Bacteria 1, no. 4 (November 17, 2022): 279–93. http://dx.doi.org/10.3390/bacteria1040021.

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The common bean (Phaseolus vulgaris L.) is a significant vegetable crop, grown because it is a rich source of protein, carbohydrates, and vitamin B complex. Fusarium solani and Rhizoctonia solani are the most widely known pathogens contributing to large yield losses for this crop. The use of cultural and chemical control practices has been ineffective. Therefore, a sustainable, affordable, and effective control method is urgently required. In this study, we aimed to isolate and characterize Bacillus velezensis from Lake Bogoria as a potential biocontrol agent for Fusarium solani. Bacteria were isolated from soil and sediments using the serial dilution technique. Molecular characterization was performed using the 16S rRNA gene. A total of 13 bacteria were isolated from soil and sediments. Based on the partial sequences, BLAST analysis showed two isolates, B20 (Bacillus velezensis strain QH03-23) and B30 (Bacillus velezensis strain JS39D), belonging to Bacillus velezensis. Other isolates were identified as Bacillus tequilensis, Brevibacillus brevis, Bacillus subtilis, Bacillus amyloliquefaciens, and Bacillus licheniformis. The effectiveness of their antifungal properties was determined via co-culturing, and we found mycelial inhibition rates of 28.17% (for B20) and 33.33% (for B30) for the Fusarium solani isolates. The characterization of the Bacillus velezensis strain revealed that they were Gram-positive and grew well at pH 7.0 and 8.5, although growth was recorded at pH 5.0 and 10.0. In terms of temperature, the optimal temperature conditions were 30−35 °C, with an optimum salinity of 0–0.5 M NaCl. When these isolates were tested for their ability to produce secondary metabolites, they were found to produce phosphate, pectinase, chitinase, protease, indole -3- acetic acid (IAA), and hydrogen cyanide (HCD), making them potential biocontrol agents.
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20

Vivas, A., J. M. Barea, and R. Azcón. "Interactive effect of Brevibacillus brevis and Glomus mosseae, both isolated from Cd contaminated soil, on plant growth, physiological mycorrhizal fungal characteristics and soil enzymatic activities in Cd polluted soil." Environmental Pollution 134, no. 2 (March 2005): 257–66. http://dx.doi.org/10.1016/j.envpol.2004.07.029.

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21

ASTRIANI, ASTRIANI, NURUD DINIYAH, JAY JAYUS, and NURHAYATI NURHAYATI. "Phenotypic identification of indigenous fungi and lactic acid bacteria isolated from ’gatot’ an Indonesian fermented food." Biodiversitas Journal of Biological Diversity 19, no. 3 (May 1, 2018): 947–54. http://dx.doi.org/10.13057/biodiv/d190325.

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Astriani A, Diniyah N, Jayus J, Nurhayati N. 2018. Phenotypic identification of indigenous fungi and lactic acid bacteria isolated from ’gatot’ an Indonesian fermented food. Biodiversitas 19: 947-954. As a traditional Indonesian food made from cassava, ‘gatot' has special attracted characters of black appearance and chewy texture, mainly as a result of certain fungi and lactic acid bacteria (LAB) during the spontaneous fermentation. However, many producers were failed to gain these typical properties since much unwanted microbial strain often appears during the spontaneous fermentation. Therefore, this study was conducted to isolate and identify the indigenous fungi and LAB which predominantly contributed in fermentation of cassava during ‘gatot’ production. Fungi and LAB were isolated from conventionally made of the ‘gatot’ followed by the phenotypic identification of the isolates based on the morphological and physiological properties. The fungi isolates were morphologically distinguished by the type of mycelia, the shape, and color of the sporangium, while the LAB strains were identified by the type of cell and colony form. In addition, the physiological behavior of the LAB isolates was characterized by their typical growth temperature, its catalase activity and its fermentation profile using BBL crystal kit test. The predominant fungi isolates were identified as Botryodiplodia theobromae, Rhizopus oligosporus, Trichoderma sp. and Aspergillus niger. B. theobromae had greyish white to black color of mycelia when it mature. R. oligosporus had globose sporangium and blackish grey color of the mature mycelia. Trichoderma sp. had green color of the mature sporangium and mycelia. A. niger had yellow color of the mycelia and black color of sporangium. Meanwhile, the indigenous LAB was majority identified as Lactobacillus manihotivorans, Bacillus licheniformis, Brevibacillus brevis and Lactobacillus fermentum. Those bacteria were gram-positive, rods shape, catalase-negative and grew optimally at 37oC. The LAB also arise frequently in many spontaneously fermented food. B. theobromae, R. oligosporus, L. manihotivorans, and L. fermentum were potential and non-pathogenic microbial, which can be used as a starter culture to produce ‘gatot’ under controlled fermentation process.
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Hou, Qihui, Chengqiang Wang, Xiaoyang Hou, Zhilin Xia, Jiangping Ye, Kai Liu, Hu Liu, et al. "Draft Genome Sequence of Brevibacillus brevis DZQ7, a Plant Growth-Promoting Rhizobacterium with Broad-Spectrum Antimicrobial Activity." Genome Announcements 3, no. 4 (August 20, 2015). http://dx.doi.org/10.1128/genomea.00831-15.

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Brevibacillus brevis DZQ7 is a plant growth-promoting rhizobacterium (PGPR) isolated from tobacco rhizosphere. Here, we report the draft genome sequence of B. brevis DZQ7. Several functional genes related to antimicrobial activity were identified in the genome.
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Nehra, Vibha, Baljeet Singh Saharan, and Madhu Choudhary. "Evaluation of Brevibacillus brevis as a potential plant growth promoting rhizobacteria for cotton (Gossypium hirsutum) crop." SpringerPlus 5, no. 1 (June 30, 2016). http://dx.doi.org/10.1186/s40064-016-2584-8.

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24

Pedersen, Tobias Bruun, Mikkel Rank Nielsen, Sebastian Birkedal Kristensen, Eva Mie Lang Spedtsberg, Trine Sørensen, Celine Petersen, Jens Muff, et al. "Speed dating for enzymes! Finding the perfect phosphopantetheinyl transferase partner for your polyketide synthase." Microbial Cell Factories 21, no. 1 (January 10, 2022). http://dx.doi.org/10.1186/s12934-021-01734-9.

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AbstractThe biosynthetic pathways for the fungal polyketides bikaverin and bostrycoidin, from Fusarium verticillioides and Fusarium solani respectively, were reconstructed and heterologously expressed in S. cerevisiae alongside seven different phosphopantetheinyl transferases (PPTases) from a variety of origins spanning bacterial, yeast and fungal origins. In order to gauge the efficiency of the interaction between the ACP-domains of the polyketide synthases (PKS) and PPTases, each were co-expressed individually and the resulting production of target polyketides were determined after 48 h of growth. In co-expression with both biosynthetic pathways, the PPTase from Fusarium verticillioides (FvPPT1) proved most efficient at producing both bikaverin and bostrycoidin, at 1.4 mg/L and 5.9 mg/L respectively. Furthermore, the remaining PPTases showed the ability to interact with both PKS’s, except for a single PKS-PPTase combination. The results indicate that it is possible to boost the production of a target polyketide, simply by utilizing a more optimal PPTase partner, instead of the commonly used PPTases; NpgA, Gsp and Sfp, from Aspergillus nidulans, Brevibacillus brevis and Bacillus subtilis respectively.
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Oliveira, J. C., J. F. Sales, A. Rubio-Neto, C. F. Silva, M. A. Soares, and F. G. Silva. "Biological control in the germination of seeds from two species native of the Cerrado region." Brazilian Journal of Biology, March 9, 2020. http://dx.doi.org/10.1590/1519-6984.222279.

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Abstract Microorganisms have been efficiently used for the biological control of phytopathogens through the production of antimicrobial substances. However, the objectives of this work were: to study the germination of Butia purpurascens Glassman and Butia archeri Glassman seeds in different substrates, to select and identify the endophytic and rhizospheric bacterial isolates of B. purpurascens and B. archeri, and to perform antibiosis tests based on the isolated microorganisms of these tree species. No difference was found between the cultivation substrates for the percentages of germination, hard seeds, and fungal contamination in the B. purpurascens seeds. The Bacillus subtilis isolated showed the best capacity for suppressing the growth of the two deteriorative fungi tested in B. purpurascens seeds. No difference was found for inhibition of the growth of Aspergillus niger fungus (deteriorative fungus of B. archeri seeds) between the microorganisms with Bacillus sp. and Brevibacillus brevis compared to the control. In the microbiolization of B. purpurascens and B. archeri seeds performed with microbiological solutions produced from the endophytic and rhizospheric strains of Bacillus sp., no differences were observed in the percentages of germination and contamination by fungi. For B. archeri seeds, there was contamination by fungi and bacteria after one day of cultivation, primarily in the regions with lesions caused by the extraction and scarification process.
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