Academic literature on the topic 'Biological data'
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Journal articles on the topic "Biological data"
Hashmi, Faiz. "Elementary approach towards Biological Data Mining." International Journal of Trend in Scientific Research and Development Volume-2, Issue-1 (December 31, 2017): 1109–14. http://dx.doi.org/10.31142/ijtsrd7198.
Full textWong, Bang. "Visualizing biological data." Nature Methods 9, no. 12 (December 2012): 1131. http://dx.doi.org/10.1038/nmeth.2258.
Full textZaki, Mohammed J., Naren Ramakrishnan, and Srinivasan Parthasarathy. "Biological Data Mining." Scientific Programming 16, no. 1 (2008): 3. http://dx.doi.org/10.1155/2008/897294.
Full textLi, Peter. "Biological Data Extinction." OMICS: A Journal of Integrative Biology 7, no. 1 (January 2003): 49–50. http://dx.doi.org/10.1089/153623103322006599.
Full textSakamoto, Ryoichi, and Shumpei Kojima. "Review of dolphinfish biological and fishing data in Japanese waters." Scientia Marina 63, no. 3-4 (December 30, 1999): 375–85. http://dx.doi.org/10.3989/scimar.1999.63n3-4375.
Full textNISHIDA, Kozo. "Biological Data and Visualization." Journal of the Visualization Society of Japan 40, no. 156 (2020): 2. http://dx.doi.org/10.3154/jvs.40.156_2.
Full textKritchevsky, David. "Commentary: Monitoring biological data." Accountability in Research 1, no. 2 (October 1990): 85–86. http://dx.doi.org/10.1080/08989629008573778.
Full textLacroix, Z. "Biological data integration: wrapping data and tools." IEEE Transactions on Information Technology in Biomedicine 6, no. 2 (June 2002): 123–28. http://dx.doi.org/10.1109/titb.2002.1006299.
Full textAbraham, Michael H., Joelle M. R. Gola, Rachel Kumarsingh, J. Enrique Cometto-Muniz, and William S. Cain. "Connection between chromatographic data and biological data." Journal of Chromatography B: Biomedical Sciences and Applications 745, no. 1 (August 2000): 103–15. http://dx.doi.org/10.1016/s0378-4347(00)00130-4.
Full textZiegel, Eric R., and E. Roberts. "Sequential Data in Biological Experiments." Technometrics 36, no. 2 (May 1994): 230. http://dx.doi.org/10.2307/1270256.
Full textDissertations / Theses on the topic "Biological data"
Rundqvist, David. "Grouping Biological Data." Thesis, Linköping University, Department of Computer and Information Science, 2006. http://urn.kb.se/resolve?urn=urn:nbn:se:liu:diva-6327.
Full textToday, scientists in various biomedical fields rely on biological data sources in their research. Large amounts of information concerning, for instance, genes, proteins and diseases are publicly available on the internet, and are used daily for acquiring knowledge. Typically, biological data is spread across multiple sources, which has led to heterogeneity and redundancy.
The current thesis suggests grouping as one way of computationally managing biological data. A conceptual model for this purpose is presented, which takes properties specific for biological data into account. The model defines sub-tasks and key issues where multiple solutions are possible, and describes what approaches for these that have been used in earlier work. Further, an implementation of this model is described, as well as test cases which show that the model is indeed useful.
Since the use of ontologies is relatively new in the management of biological data, the main focus of the thesis is on how semantic similarity of ontological annotations can be used for grouping. The results of the test cases show for example that the implementation of the model, using Gene Ontology, is capable of producing groups of data entries with similar molecular functions.
Hasegawa, Takanori. "Reconstructing Biological Systems Incorporating Multi-Source Biological Data via Data Assimilation Techniques." 京都大学 (Kyoto University), 2015. http://hdl.handle.net/2433/195985.
Full textJakonienė, Vaida. "Integration of biological data /." Linköping : Linköpings universitet, 2006. http://urn.kb.se/resolve?urn=urn:nbn:se:liu:diva-7484.
Full textJakonienė, Vaida. "Integration of Biological Data." Doctoral thesis, Linköpings universitet, IISLAB - Laboratoriet för intelligenta informationssystem, 2006. http://urn.kb.se/resolve?urn=urn:nbn:se:liu:diva-7484.
Full textDost, Banu. "Optimization algorithms for biological data." Diss., [La Jolla] : University of California, San Diego, 2010. http://wwwlib.umi.com/cr/ucsd/fullcit?p3397170.
Full textTitle from first page of PDF file (viewed March 23, 2010). Available via ProQuest Digital Dissertations. Vita. Includes bibliographical references (p. 149-159).
Schmidberger, Markus. "Parallel Computing for Biological Data." Diss., lmu, 2009. http://nbn-resolving.de/urn:nbn:de:bvb:19-104921.
Full textBERNARDINI, GIULIA. "COMBINATORIAL METHODS FOR BIOLOGICAL DATA." Doctoral thesis, Università degli Studi di Milano-Bicocca, 2021. http://hdl.handle.net/10281/305220.
Full textThe main goal of this thesis is to develop new algorithmic frameworks to deal with (i) a convenient representation of a set of similar genomes and (ii) phylogenetic data, with particular attention to the increasingly accurate tumor phylogenies. A “pan-genome” is, in general, any collection of genomic sequences to be analyzed jointly or to be used as a reference for a population. A phylogeny, in turn, is meant to describe the evolutionary relationships among a group of items, be they species of living beings, genes, natural languages, ancient manuscripts or cancer cells. With the exception of one of the results included in this thesis, related to the analysis of tumor phylogenies, the focus of the whole work is mainly theoretical, the intent being to lay firm algorithmic foundations for the problems by investigating their combinatorial aspects, rather than to provide practical tools for attacking them. Deep theoretical insights on the problems allow a rigorous analysis of existing methods, identifying their strong and weak points, providing details on how they perform and helping to decide which problems need to be further addressed. In addition, it is often the case where new theoretical results (algorithms, data structures and reductions to other well-studied problems) can either be directly applied or adapted to fit the model of a practical problem, or at least they serve as inspiration for developing new practical tools. The first part of this thesis is devoted to methods for handling an elastic-degenerate text, a computational object that compactly encodes a collection of similar texts, like a pan-genome. Specifically, we attack the problem of matching a sequence in an elastic-degenerate text, both exactly and allowing a certain amount of errors, and the problem of comparing two degenerate texts. In the second part we consider both tumor phylogenies, describing the evolution of a tumor, and “classical” phylogenies, representing, for instance, the evolutionary history of the living beings. In particular, we present new techniques to compare two or more tumor phylogenies, needed to evaluate the results of different inference methods, and we give a new, efficient solution to a longstanding problem on “classical” phylogenies: to decide whether, in the presence of missing data, it is possible to arrange a set of species in a phylogenetic tree that enjoys specific properties.
Chakraborty, Ushashi. "Finding the Most Predictive Data Source in Biological Data." Thesis, North Dakota State University, 2013. https://hdl.handle.net/10365/26567.
Full textGel, Moreno Bernat. "Dissemination and visualisation of biological data." Doctoral thesis, Universitat Politècnica de Catalunya, 2014. http://hdl.handle.net/10803/283143.
Full textLes recents millores tecnològiques han portat a una explosió en la quantitat de dades biològiques que es generen i a l'aparició de nous reptes en el camp de la gestió de les dades biològiques. Per a maximitzar el coneixement que podem extreure d'aquestes ingents quantitats de dades cal que solucionem el problemes associats al seu anàlisis, i en particular a la seva disseminació i visualització. La compartició d'aquestes dades de manera lliure i gratuïta pot beneficiar en gran mesura a la comunitat científica i a la societat en general, però per a fer-ho calen noves eines i tècniques. Actualment, molts grups són capaços de generar grans conjunts de dades i la seva publicació en pot incrementar molt el valor científic. A més, la disponibilitat de grans conjunts de dades és necessària per al desenvolupament de nous algorismes d'anàlisis. És important, doncs, que les dades biològiques que es generen siguin accessibles de manera senzilla, estandaritzada i lliure. Disseminació El Sistema d'Anotació Distribuïda (DAS) és un protocol dissenyat per a la publicació i integració d'anotacions sobre entitats biològiques de manera distribuïda. DAS segueix una esquema de client-servidor, on el client obté dades d'un o més servidors per a combinar-les, processar-les o visualitzar-les. Avui dia, però, crear un servidor DAS necessita uns coneixements i infraestructures que van més enllà dels recursos de molts grups de recerca. Per això, hem creat easyDAS, una plataforma per a la creació automàtica de servidors DAS. Amb easyDAS un usuari pot crear un servidor DAS a través d'una senzilla interfície web i amb només alguns clics. Visualització Els navegadors genomics són un dels paradigmes de de visualització de dades genòmiques més usats i permet veure conjunts de dades posicionades al llarg d'una seqüència. Movent-se al llarg d'aquesta seqüència és possibles explorar aquestes dades. Quan aquest projecte va començar, l'any 2007, tots els grans navegadors genomics oferien una interactivitat limitada basada en l'ús de botons. Des d'un punt de vista d'arquitectura tots els navegadors basats en web eren molt semblants: un client senzill encarregat d'ensenyar les imatges i un servidor complex encarregat d'obtenir les dades, processar-les i generar les imatges. Així, cada canvi en els paràmetres de visualització requeria una nova petició al servidor, impactant molt negativament en la velocitat de resposta percebuda. Vam crear un prototip de navegador genòmic anomenat GenExp. És un navegador interactiu basat en web que fa servir canvas per a dibuixar en client i que ofereix la possibilitatd e manipulació directa de la respresentació del genoma. GenExp té a més algunes característiques úniques com la possibilitat de crear multiples finestres de visualització o la possibilitat de guardar i compartir sessions de navegació. A més, com que és un client DAS pot integrar les dades de qualsevol servidor DAS com els d'Ensembl, UCSC o fins i tot aquells creats amb easyDAS. A més, hem desenvolupat jsDAS, la primera llibreria de client DAS completa escrita en javascript. jsDAS es pot integrar en qualsevol aplicació DAS per a dotar-la de la possibilitat d'accedir a dades de servidors DAS. Tot el programari desenvolupat en el marc d'aquesta tesis està lliurement disponible i sota una llicència de codi lliure.
Droop, Alastair Philip. "Correlation Analysis of Multivariate Biological Data." Thesis, University of York, 2009. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.507622.
Full textBooks on the topic "Biological data"
Jake, Chen, and Lonardi Stefano, eds. Biological data mining. Boca Raton, FL: Chapman & Hall/CRC, 2010.
Find full textJake, Chen, and Lonardi Stefano, eds. Biological data mining. Boca Raton: Chapman & Hall/CRC, 2010.
Find full textBOHS Technology Committee. Working Party on Biological Monitoring., ed. Biological monitoring reference data. Leeds, England: H and H Scientific Consultants, 1992.
Find full textRoberts, E. A. Sequential Data in Biological Experiments. Dordrecht: Springer Netherlands, 1992. http://dx.doi.org/10.1007/978-94-011-3120-9.
Full textMaglaveras, Nicos, Ioanna Chouvarda, Vassilis Koutkias, and Rüdiger Brause, eds. Biological and Medical Data Analysis. Berlin, Heidelberg: Springer Berlin Heidelberg, 2006. http://dx.doi.org/10.1007/11946465.
Full textOliveira, José Luís, Víctor Maojo, Fernando Martín-Sánchez, and António Sousa Pereira, eds. Biological and Medical Data Analysis. Berlin, Heidelberg: Springer Berlin Heidelberg, 2005. http://dx.doi.org/10.1007/11573067.
Full textBarreiro, José María, Fernando Martín-Sánchez, Víctor Maojo, and Ferran Sanz, eds. Biological and Medical Data Analysis. Berlin, Heidelberg: Springer Berlin Heidelberg, 2004. http://dx.doi.org/10.1007/b104033.
Full text1958-, Doods H. N., and Meel, J. C. A. van 1949-, eds. Receptor data for biological experiments. Chichester: Ellis Horwood, 1991.
Find full textDolph, Schluter, ed. The analysis of biological data. Greenwood Village, Colo: Roberts and Co. Publishers, 2009.
Find full textC, Fry John, ed. Biological data analysis: A practical approach. Oxford: IRL Press at Oxford University Press, 1993.
Find full textBook chapters on the topic "Biological data"
Shekhar, Shashi, and Hui Xiong. "Biological Data Mining." In Encyclopedia of GIS, 56. Boston, MA: Springer US, 2008. http://dx.doi.org/10.1007/978-0-387-35973-1_101.
Full textAshour, Amira S., Nilanjan Dey, and Dac-Nhuong Le. "Biological Data Mining:." In Mining Multimedia Documents, 161–72. Boca Raton : CRC Press, [2017]: Chapman and Hall/CRC, 2017. http://dx.doi.org/10.1201/b21638-12.
Full textAshour, Amira S., Nilanjan Dey, and Dac-Nhuong Le. "Biological Data Mining:." In Mining Multimedia Documents, 161–72. Taylor & Francis Group, 6000 Broken Sound Parkway NW, Suite 300, Boca Raton, FL 33487-2742: CRC Press, 2017. http://dx.doi.org/10.1201/9781315399744-13.
Full textKim, Ju Han. "Biological Network Analysis." In Genome Data Analysis, 233–46. Singapore: Springer Singapore, 2019. http://dx.doi.org/10.1007/978-981-13-1942-6_13.
Full textKopetz, Hermann. "Data in Biological Systems." In Data, Information, and Time, 53–57. Cham: Springer International Publishing, 2022. http://dx.doi.org/10.1007/978-3-030-96329-3_9.
Full textHu, Yuh-Jyh. "Biological Sequence Data Mining." In Principles of Data Mining and Knowledge Discovery, 228–40. Berlin, Heidelberg: Springer Berlin Heidelberg, 2001. http://dx.doi.org/10.1007/3-540-44794-6_19.
Full textPedersen, Edvard, and Lars Ailo Bongo. "Big Biological Data Management." In Computer Communications and Networks, 265–77. Cham: Springer International Publishing, 2016. http://dx.doi.org/10.1007/978-3-319-44881-7_13.
Full textGargaud, Muriel, Ricardo Amils, Carlos Briones, Henderson James Cleaves, and Felipe Gomez. "Chemical and Biological Data." In Encyclopedia of Astrobiology, 2705–12. Berlin, Heidelberg: Springer Berlin Heidelberg, 2015. http://dx.doi.org/10.1007/978-3-662-44185-5_5071.
Full textGargaud, M., R. Amils, C. Briones, J. Cleaves, and F. Gomez. "Chemical and Biological Data." In Encyclopedia of Astrobiology, 1825–30. Berlin, Heidelberg: Springer Berlin Heidelberg, 2011. http://dx.doi.org/10.1007/978-3-642-11274-4_5071.
Full textGargaud, Muriel, Ricardo Amils, Carlos Briones, Henderson James Cleaves II, and Felipe Gomez. "Chemical and Biological Data." In Encyclopedia of Astrobiology, 1–7. Berlin, Heidelberg: Springer Berlin Heidelberg, 2022. http://dx.doi.org/10.1007/978-3-642-27833-4_5071-4.
Full textConference papers on the topic "Biological data"
Chen, Huaming, Jun Shen, Lei Wang, and Chi-Hung Chi. "Towards Biological Sequence Data Service with Insights." In 2018 IEEE International Conference on Big Data (Big Data). IEEE, 2018. http://dx.doi.org/10.1109/bigdata.2018.8622194.
Full textBaralis, Elena, and Alessandro Fiori. "Exploring Heterogeneous Biological Data Sources." In 2008 19th International Conference on Database and Expert Systems Applications (DEXA). IEEE, 2008. http://dx.doi.org/10.1109/dexa.2008.116.
Full textEltabakh, Mohamed Y., Mourad Ouzzani, Walid G. Aref, Ahmed K. Elmagarmid, Yasin Laura-Silva, Muhammad U. Arshad, David Salt, and Ivan Baxter. "Managing Biological Data using bdbms." In 2008 IEEE 24th International Conference on Data Engineering (ICDE 2008). IEEE, 2008. http://dx.doi.org/10.1109/icde.2008.4497631.
Full textHammer, Barbara, Alexander Hasenfuss, Frank-Michael Schleif, Thomas Villmann, Marc Strickert, and Udo Seiffert. "Intuitive Clustering of Biological Data." In 2007 International Joint Conference on Neural Networks. IEEE, 2007. http://dx.doi.org/10.1109/ijcnn.2007.4371244.
Full textO'Donoghue, Seán I. "Visualising biological data: Current perspectives." In 2013 INTERNATIONAL SYMPOSIUM ON COMPUTATIONAL MODELS FOR LIFE SCIENCES. AIP, 2013. http://dx.doi.org/10.1063/1.4825252.
Full textFulton, Tom K. "Biological noise on seismic data." In SEG Technical Program Expanded Abstracts 1993. Society of Exploration Geophysicists, 1993. http://dx.doi.org/10.1190/1.1822539.
Full textFulton, T. K. "Biological Noise On Seismic Data." In Offshore Technology Conference. Offshore Technology Conference, 1993. http://dx.doi.org/10.4043/7132-ms.
Full text"DATA INTEGRATION IN BIOLOGICAL MODELS." In 10th International Conference on Enterprise Information Systems. SciTePress - Science and and Technology Publications, 2008. http://dx.doi.org/10.5220/0001667603890392.
Full textAlzuru, Icaro, Aditi Malladi, Andrea Matsunaga, Mauricio Tsugawa, and Fortes Jose A.B. "Human-Machine Information Extraction Simulator for Biological Collections." In 2019 IEEE International Conference on Big Data (Big Data). IEEE, 2019. http://dx.doi.org/10.1109/bigdata47090.2019.9005601.
Full textTata, S., J. S. Friedman, and A. Swaroop. "Declarative Querying for Biological Sequences." In 22nd International Conference on Data Engineering (ICDE'06). IEEE, 2006. http://dx.doi.org/10.1109/icde.2006.47.
Full textReports on the topic "Biological data"
Simeonova, Valeriya. How to Analyze Compromised Data from Biological Experiments? "Prof. Marin Drinov" Publishing House of Bulgarian Academy of Sciences, April 2019. http://dx.doi.org/10.7546/crabs.2019.04.09.
Full textHofmann, Eileen E. Multi-Dimensional Data Assimilation for Physical-Biological Models. Fort Belvoir, VA: Defense Technical Information Center, September 1999. http://dx.doi.org/10.21236/ada630557.
Full textHofmann, Eileen E. Multi-Dimensional Data Assimilation for Physical-Biological Models. Fort Belvoir, VA: Defense Technical Information Center, July 2000. http://dx.doi.org/10.21236/ada380222.
Full textChaudhary, Aashish. OPEN SOURCE SCALABLE DATA SERVICES AND DATA FUSION FOR BIOLOGICAL AND ENVIRONMENTAL SCIENCES. Office of Scientific and Technical Information (OSTI), March 2020. http://dx.doi.org/10.2172/1602442.
Full textGelmont, Boris, Alexei Bykhovski, and Tatiana Globus. New Concepts for Detection Biological Targets: Terahertz Signature Data Base Generation. Fort Belvoir, VA: Defense Technical Information Center, August 2008. http://dx.doi.org/10.21236/ada499606.
Full textLangston, Michael A. Scalable Computational Methods for the Analysis of High-Throughput Biological Data. Office of Scientific and Technical Information (OSTI), September 2012. http://dx.doi.org/10.2172/1050046.
Full textPearman, T. R. R., A. Bates, K. Robert, A. Callaway, C. Lo Iacono, R. Hall, and V. A I Huvenne. The influence of the scale of enquiry and estimated biological parameters on the biological signal obtained from underwater video data. Natural Resources Canada/ESS/Scientific and Technical Publishing Services, 2017. http://dx.doi.org/10.4095/305910.
Full textLapota, David, and Stephen H. Lieberman. Biological Environmental Arctic Project (BEAP) Preliminary Data (Arctic West Summer 1986 Cruise). Fort Belvoir, VA: Defense Technical Information Center, November 1986. http://dx.doi.org/10.21236/ada179818.
Full textChris Sander, PhD. Data Exchange Format for Biological Pathway Databases (BioPAX) Workshop - Final Technical Report. Office of Scientific and Technical Information (OSTI), July 2004. http://dx.doi.org/10.2172/826395.
Full textBravo, Adriana, James Gibbs, Jennifer Griffiths, Ian J. Harrison, and Ana Porzecanski. What Is Biodiversity? Analyzing Data to Compare and Conserve Spider Communities. American Museum of Natural History, 2012. http://dx.doi.org/10.5531/cbc.ncep.0013.
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