Journal articles on the topic 'Bacterial typing techniques'
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FARBER, J. M. "An Introduction to the Hows and Whys of Molecular Typing†." Journal of Food Protection 59, no. 10 (October 1, 1996): 1091–101. http://dx.doi.org/10.4315/0362-028x-59.10.1091.
Full textZadoks, Ruth, Willem van Leeuwen, Herman Barkema, Otlis Sampimon, Henri Verbrugh, Ynte Hein Schukken, and Alex van Belkum. "Application of Pulsed-Field Gel Electrophoresis and Binary Typing as Tools in Veterinary Clinical Microbiology and Molecular Epidemiologic Analysis of Bovine and HumanStaphylococcus aureus Isolates." Journal of Clinical Microbiology 38, no. 5 (2000): 1931–39. http://dx.doi.org/10.1128/jcm.38.5.1931-1939.2000.
Full textFeng, Ye, Shengmei Zou, Hangfei Chen, Yunsong Yu, and Zhi Ruan. "BacWGSTdb 2.0: a one-stop repository for bacterial whole-genome sequence typing and source tracking." Nucleic Acids Research 49, no. D1 (October 3, 2020): D644—D650. http://dx.doi.org/10.1093/nar/gkaa821.
Full textAlmasian-Tehrani, Nasim, Masoud Alebouyeh, Shahnaz Armin, Neda Soleimani, Leila Azimi, and Roozbeh Shaker-Darabad. "Overview of typing techniques as molecular epidemiology tools for bacterial characterization." Cellular, Molecular and Biomedical Reports 1, no. 2 (December 1, 2021): 69–77. http://dx.doi.org/10.55705/cmbr.2021.143413.1016.
Full textArturo Salazar, Nelson, Laura Patricia Uribe, and Dora Ines Ríos. "The molecular characterisation of bacteria associated with neonatal necrotising enterocolitis and sepsis which were isolated from hospitals in Bogotá, Colombia." ghalib quarterly journal 1, no. 1 (March 6, 2023): 1–8. http://dx.doi.org/10.58342/ajid/ghalibuni1.
Full textHowell, S. A., and W. C. Noble. "Typing tools for the investigation of epidemic fungal infection." Epidemiology and Infection 105, no. 1 (August 1990): 1–9. http://dx.doi.org/10.1017/s0950268800047580.
Full textDieckmann, Ralf, Jens Andre Hammerl, Hartmut Hahmann, Amal Wicke, Sylvia Kleta, Piotr Wojciech Dabrowski, Andreas Nitsche, Maren Stämmler, Sascha Al Dahouk, and Peter Lasch. "Rapid characterisation of Klebsiella oxytoca isolates from contaminated liquid hand soap using mass spectrometry, FTIR and Raman spectroscopy." Faraday Discussions 187 (2016): 353–75. http://dx.doi.org/10.1039/c5fd00165j.
Full textNATSOS, G., N. K. MOUTTOTOU, S. AHMAD, Z. KAMRAN, A. IOANNIDIS, and K. C. KOUTOULIS. "The genus Campylobacter: detection and isolation methods, species identification & typing techniques." Journal of the Hellenic Veterinary Medical Society 70, no. 1 (April 24, 2019): 1327. http://dx.doi.org/10.12681/jhvms.20337.
Full textArturo Salazar, Nelson. "The molecular characterisation of bacteria associated with neonatal necrotising enterocolitis and sepsis which were isolated from hospitals in Bogotá, Colombia." Afghanistan Journal of Infectious Diseases 1, no. 2 (November 22, 2023): 11–23. http://dx.doi.org/10.60141/ajid/ghalibuni1.
Full textAgarkova, I. V., P. A. Lambrecht, A. K. Vidaver, and R. M. Harveson. "Genetic diversity among Curtobacterium flaccumfaciens pv. flaccumfaciens populations in the American High Plains." Canadian Journal of Microbiology 58, no. 6 (June 2012): 788–801. http://dx.doi.org/10.1139/w2012-052.
Full textChouaia, Bessem, Paolo Rossi, Matteo Montagna, Irene Ricci, Elena Crotti, Claudia Damiani, Sara Epis, et al. "Molecular Evidence for Multiple Infections as Revealed by Typing of Asaia Bacterial Symbionts of Four Mosquito Species." Applied and Environmental Microbiology 76, no. 22 (September 17, 2010): 7444–50. http://dx.doi.org/10.1128/aem.01747-10.
Full textZłoch, Michał, Paweł Pomastowski, Ewelina Maślak, Fernanda Monedeiro, and Bogusław Buszewski. "Study on Molecular Profiles of Staphylococcus aureus Strains: Spectrometric Approach." Molecules 25, no. 21 (October 22, 2020): 4894. http://dx.doi.org/10.3390/molecules25214894.
Full textPetronella, Nicholas, Palni Kundra, Olivia Auclair, Karine Hébert, Mary Rao, Kyle Kingsley, Katrien De Bruyne, et al. "Changes detected in the genome sequences of Escherichia coli, Listeria monocytogenes, Vibrio parahaemolyticus, and Salmonella enterica after serial subculturing." Canadian Journal of Microbiology 65, no. 11 (November 2019): 842–50. http://dx.doi.org/10.1139/cjm-2019-0235.
Full textFOLEY, STEVEN L., SHABBIR SIMJEE, JIANGHONG MENG, DAVID G. WHITE, PATRICK F. McDERMOTT, and SHAOHUA ZHAO. "Evaluation of Molecular Typing Methods for Escherichia coli O157:H7 Isolates from Cattle, Food, and Humans." Journal of Food Protection 67, no. 4 (April 1, 2004): 651–57. http://dx.doi.org/10.4315/0362-028x-67.4.651.
Full textCieślik, Justyna, and Marta Wróblewska. "MALDI TOF MS – new possibilities in routine microbiological diagnostics." Diagnostyka Laboratoryjna 54, no. 2 (July 18, 2019): 99–104. http://dx.doi.org/10.5604/01.3001.0013.7693.
Full textWu, Xueling, Hong Duan, Hongwei Fan, Zhenzhen Zhang, and Lili Liu. "Comparative Study of PCR-Based Approaches for the Genetic Characterization of Three Strains of Acidithiobacillus caldus Isolated from Different Sites in China." Polish Journal of Microbiology 62, no. 4 (2013): 351–58. http://dx.doi.org/10.33073/pjm-2013-048.
Full textKounatidis, Ilias, Elena Crotti, Panagiotis Sapountzis, Luciano Sacchi, Aurora Rizzi, Bessem Chouaia, Claudio Bandi, et al. "Acetobacter tropicalis Is a Major Symbiont of the Olive Fruit Fly (Bactrocera oleae)." Applied and Environmental Microbiology 75, no. 10 (March 20, 2009): 3281–88. http://dx.doi.org/10.1128/aem.02933-08.
Full textSmit, Eric, Paula Leeflang, Suzanne Gommans, Jan van den Broek, Saskia van Mil, and Karel Wernars. "Diversity and Seasonal Fluctuations of the Dominant Members of the Bacterial Soil Community in a Wheat Field as Determined by Cultivation and Molecular Methods." Applied and Environmental Microbiology 67, no. 5 (May 1, 2001): 2284–91. http://dx.doi.org/10.1128/aem.67.5.2284-2291.2001.
Full textRuan, Zhi, Yunsong Yu, and Ye Feng. "The global dissemination of bacterial infections necessitates the study of reverse genomic epidemiology." Briefings in Bioinformatics 21, no. 2 (February 4, 2019): 741–50. http://dx.doi.org/10.1093/bib/bbz010.
Full textAhmed, Shwan, Jawaher Albahri, Sahand Shams, Silvana Sosa-Portugal, Cassio Lima, Yun Xu, Rachel McGalliard, et al. "Rapid Classification and Differentiation of Sepsis-Related Pathogens Using FT-IR Spectroscopy." Microorganisms 12, no. 7 (July 12, 2024): 1415. http://dx.doi.org/10.3390/microorganisms12071415.
Full textSallman, Ruqaia Sabbar, Suzan Saadi Hussein, and Munum Radwan Ali. "ERIC- PCR Typing, RAPD-PCR Fingerprinting and Quorum Sensing Gene Analysis of Pseudomonas aeruginosa Isolated from Different Clinical Sources." Al-Mustansiriyah Journal of Science 29, no. 2 (November 17, 2018): 50. http://dx.doi.org/10.23851/mjs.v29i2.345.
Full textLa China, Salvatore, Luciana De Vero, Kavitha Anguluri, Marcello Brugnoli, Dhouha Mamlouk, and Maria Gullo. "Kombucha Tea as a Reservoir of Cellulose Producing Bacteria: Assessing Diversity among Komagataeibacter Isolates." Applied Sciences 11, no. 4 (February 10, 2021): 1595. http://dx.doi.org/10.3390/app11041595.
Full textProjahn, Michaela, Jens A. Hammerl, Ralf Dieckmann, and Sascha Al Dahouk. "A Proof of Principle for the Detection of Viable Brucella spp. in Raw Milk by qPCR Targeting Bacteriophages." Microorganisms 8, no. 9 (August 31, 2020): 1326. http://dx.doi.org/10.3390/microorganisms8091326.
Full textBourdin, Thibault, Marie-Ève Benoit, Emilie Bédard, Michèle Prévost, Caroline Quach, Eric Déziel, and Philippe Constant. "High-Throughput Short Sequence Typing Schemes for Pseudomonas aeruginosa and Stenotrophomonas maltophilia Pure Culture and Environmental DNA." Microorganisms 12, no. 1 (December 27, 2023): 48. http://dx.doi.org/10.3390/microorganisms12010048.
Full textFeil, Edward J., Bao C. Li, David M. Aanensen, William P. Hanage, and Brian G. Spratt. "eBURST: Inferring Patterns of Evolutionary Descent among Clusters of Related Bacterial Genotypes from Multilocus Sequence Typing Data." Journal of Bacteriology 186, no. 5 (March 1, 2004): 1518–30. http://dx.doi.org/10.1128/jb.186.5.1518-1530.2004.
Full textVillari, P., C. Sarnataro, and L. Iacuzio. "Molecular Epidemiology of Staphylococcus epidermidis in a Neonatal Intensive Care Unit over a Three-Year Period." Journal of Clinical Microbiology 38, no. 5 (2000): 1740–46. http://dx.doi.org/10.1128/jcm.38.5.1740-1746.2000.
Full textBorham, Mohamed, Atef Oreiby, Attia El-Gedawy, Yamen Hegazy, Hazim O. Khalifa, Magdy Al-Gaabary, and Tetsuya Matsumoto. "Review on Bovine Tuberculosis: An Emerging Disease Associated with Multidrug-Resistant Mycobacterium Species." Pathogens 11, no. 7 (June 21, 2022): 715. http://dx.doi.org/10.3390/pathogens11070715.
Full textOksel, Cansu, Farhat A. Avin, Mustafa Mirik, and Fulya Baysal-Gurel. "Identification and Genetic Characterization of Pseudomonas syringae pv. syringae from Sweet Cherry in Turkey." Plant Disease 106, no. 4 (April 1, 2022): 1253–61. http://dx.doi.org/10.1094/pdis-10-21-2241-re.
Full textGiraldo Aristizábal, Adriana, Astrid Maribel Aguilera Becerra, Eliana Ximena Urbano Cáceres, Adriana María Pedraza Bernal, and Claudia Patricia Jaimes Bernal. "Comparación teórica entre técnicas fenotípicas y genotípicas utilizadas en la identificación de Listeria monocytogenes." Revista Facultad de Ciencias Básicas 16, no. 2 (August 27, 2021): 7–19. http://dx.doi.org/10.18359/rfcb.5012.
Full textJesse, Faez, Asinamai Bitrus, Innocent Peter, Eric Chung, and Nuriza Tukiran. "Clinical and Subclinical Mastitis in Ruminants: A Review of Etiological agents, Diagnosis, Clinical Management and Risk factors." Journal of Research in Veterinary Sciences 1, no. 1 (2023): 1. http://dx.doi.org/10.5455/jrvs.20230730103147.
Full textJolley, K. A., J. Kalmusova, E. J. Feil, S. Gupta, M. Musilek, P. Kriz, and M. C. J. Maiden. "Carried Meningococci in the Czech Republic: a Diverse Recombining Population." Journal of Clinical Microbiology 38, no. 12 (2000): 4492–98. http://dx.doi.org/10.1128/jcm.38.12.4492-4498.2000.
Full textHsieh, Ying-Hsin, Yun F. Wang, Hercules Moura, Nancy Miranda, Steven Simpson, Ramnath Gowrishankar, John Barr, Khalil Kerdahi, and Irshad M. Sulaiman. "Application of MALDI-TOF MS Systems in the Rapid Identification of Campylobacter spp. of Public Health Importance." Journal of AOAC INTERNATIONAL 101, no. 3 (May 1, 2018): 761–68. http://dx.doi.org/10.5740/jaoacint.17-0266.
Full textPérez-Etayo, Lara, David González, and Ana Isabel Vitas. "Clonal Complexes 23, 10, 131 and 38 as Genetic Markers of the Environmental Spread of Extended-Spectrum β-Lactamase (ESBL)-Producing E. coli." Antibiotics 11, no. 11 (October 24, 2022): 1465. http://dx.doi.org/10.3390/antibiotics11111465.
Full textSzabo, E. A., and P. M. Desmarchelier. "A comparative study of clinical and food isolates ofListeria monocytogenesand related species." Epidemiology and Infection 105, no. 2 (October 1990): 245–54. http://dx.doi.org/10.1017/s0950268800047853.
Full textKishi, Luciano Takeshi, Ester Wickert, and Eliana Gertrudes de Macedo Lemos. "Evaluation of Xylella fastidiosa genetic diversity by fAFPL markers." Revista Brasileira de Fruticultura 30, no. 1 (March 2008): 202–8. http://dx.doi.org/10.1590/s0100-29452008000100037.
Full textCano-Martín, Estefanía, Inés Portillo-Calderón, Patricia Pérez-Palacios, José María Navarro-Marí, María Amelia Fernández-Sierra, and José Gutiérrez-Fernández. "A Study in a Regional Hospital of a Mid-Sized Spanish City Indicates a Major Increase in Infection/Colonization by Carbapenem-Resistant Bacteria, Coinciding with the COVID-19 Pandemic." Antibiotics 10, no. 9 (September 18, 2021): 1127. http://dx.doi.org/10.3390/antibiotics10091127.
Full textMecherouk, Choâyb, Malika Ifticene, and Nora Mimoune. "Bacilloscopy, Bacterial culture, and Spoligotyping of Mycobacterium bovis strains isolated from cattle in North Central Algeria." Veterinarska stanica 54, no. 6 (May 31, 2023): 601–12. http://dx.doi.org/10.46419/vs.54.6.5.
Full textMiller, Melissa B., and Yi-Wei Tang. "Basic Concepts of Microarrays and Potential Applications in Clinical Microbiology." Clinical Microbiology Reviews 22, no. 4 (October 2009): 611–33. http://dx.doi.org/10.1128/cmr.00019-09.
Full textAdeoti, Olatunde Micheal, Abidemi Hawawu Bello, Olajumoke Elisabeth Adedokun, Kafilat Adenike Komolafe, David Ademola Adesina, and Opeyemi Joy Olaoye. "Distinctive Molecular typing of 16S rRNA of Bacillus species isolated from farm settlement." International Journal of Immunology and Microbiology 1, no. 1 (June 6, 2021): 10–15. http://dx.doi.org/10.55124/ijim.v1i1.55.
Full textUchida, Shumpei, Makiko Uemura, Osamu Imataki, and Norimitsu Kadowaki. "Strain-Specific Transmission in an Outbreak of ESBL-Producing Enterobacteriaceae in a Medical Oncology and Immunology Care Unit." Blood 126, no. 23 (December 3, 2015): 5632. http://dx.doi.org/10.1182/blood.v126.23.5632.5632.
Full textHaque, Md, Md Islam, Md Miah, Sunny Das, and Subir Sarker. "Molecular characterization of multidrug-resistant Escherichia coli isolated from human urine infections with their antibiogram profile." Journal of Advanced Biotechnology and Experimental Therapeutics 6, no. 1 (2023): 172. http://dx.doi.org/10.5455/jabet.2023.d116.
Full textFullerton, R. A., L. Taufa, J. L. Vanneste, J. Yu, D. A. Cornish, and D. Park. "First Record of Bacterial Crown Rot of Papaya (Carica papaya) Caused by an Erwinia papayae-Like Bacterium in the Kingdom of Tonga." Plant Disease 95, no. 1 (January 2011): 70. http://dx.doi.org/10.1094/pdis-06-10-0455.
Full textLam, Lisa M. T., Ashraf Ismail, Jacqueline Sedman, and Émilie Vallières. "2167. Evaluation of Attenuated Total Reflectance Fourier Transform Infrared Spectroscopy for Rapid and Reagent-Free Identification of Burkholderia spp." Open Forum Infectious Diseases 6, Supplement_2 (October 2019): S735. http://dx.doi.org/10.1093/ofid/ofz360.1847.
Full textBerger, Bernard, R. David Pridmore, Caroline Barretto, Françoise Delmas-Julien, Kerstin Schreiber, Fabrizio Arigoni, and Harald Brüssow. "Similarity and Differences in the Lactobacillus acidophilus Group Identified by Polyphasic Analysis and Comparative Genomics." Journal of Bacteriology 189, no. 4 (December 1, 2006): 1311–21. http://dx.doi.org/10.1128/jb.01393-06.
Full textHarb, Ali, Sam Abraham, Bertha Rusdi, Tanya Laird, Mark O’Dea, and Ihab Habib. "Molecular Detection and Epidemiological Features of Selected Bacterial, Viral, and Parasitic Enteropathogens in Stool Specimens from Children with Acute Diarrhea in Thi-Qar Governorate, Iraq." International Journal of Environmental Research and Public Health 16, no. 9 (May 6, 2019): 1573. http://dx.doi.org/10.3390/ijerph16091573.
Full textSadeghifard, Nourkhoda, Reza Ranjbar, Javad Zaeimi, Mohammad Yousef Alikhani, Sobhan Ghafouryan, Mohammad Raftari, Ahmed Sahib Abdulamir, Ali Delpisheh, Reza Mohebi, and Fatimah Abu Bakar. "Antimicrobial susceptibility, plasmid profiles, and RAPD-PCR typing of Acinetobacter bacteria." Asian Biomedicine 4, no. 6 (December 1, 2010): 901–11. http://dx.doi.org/10.2478/abm-2010-0118.
Full textAlwan, Maha Mufeed, and Muthanna A. Al-Mahdawi. "Molecular Typing of Bacterial Pathogens Isolated from Air, Non-Living Surfaces and Clinical Sources in Diyala Governorate Using MLST Technique." Pakistan Journal of Medical and Health Sciences 16, no. 11 (November 30, 2022): 381–86. http://dx.doi.org/10.53350/pjmhs20221611381.
Full textAucken, H. M., and T. L. Pitt. "Lipopolysaccharide profile typing as a technique for comparative typing of gram-negative bacteria." Journal of Clinical Microbiology 31, no. 5 (1993): 1286–89. http://dx.doi.org/10.1128/jcm.31.5.1286-1289.1993.
Full textSilva, Adrianne M. A., Ana C. O. Luz, Keyla V. M. Xavier, Maria P. S. Barros, Hirisleide B. Alves, Marcus V. A. Batista, and Tereza C. Leal-Balbino. "Analysis of CRISPR/Cas Genetic Structure, Spacer Content and Molecular Epidemiology in Brazilian Acinetobacter baumannii Clinical Isolates." Pathogens 12, no. 6 (May 26, 2023): 764. http://dx.doi.org/10.3390/pathogens12060764.
Full textNuangmek, Aniroot, Suvichai Rojanasthien, Suwit Chotinun, Panuwat Yamsakul, Pakpoom Tadee, Visanu Thamlikitkul, Nattasit Tansakul, and Prapas Patchanee. "Antimicrobial Resistance in ESBL-Producing Escherichia coli Isolated from Layer and Pig Farms in Thailand." Acta Scientiae Veterinariae 46, no. 1 (May 16, 2018): 8. http://dx.doi.org/10.22456/1679-9216.81823.
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