Journal articles: 'Associated gene'

1

Gough, N. R. "Gene-Associated AMPK." Science Signaling 3, no. 138 (September 7, 2010): ec272-ec272. http://dx.doi.org/10.1126/scisignal.3138ec272.

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Leka, Sofia, Sofia Kitsiou-Tzeli, Ariadni Kalpini-Mavrou, and Emmanuel Kanavakis. "Short stature and dysmorphology associated with defects in the SHOX gene." HORMONES 5, no. 2 (April 15, 2006): 107–18. http://dx.doi.org/10.14310/horm.2002.11174.

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Divers, Jasmin, Nicholette D. Palmer, Lingyi Lu, Carl D. Langefeld, Michael V. Rocco, Pamela J. Hicks, Mariana Murea, Lijun Ma, Donald W. Bowden, and Barry I. Freedman. "Gene–gene interactions in APOL1-associated nephropathy." Nephrology Dialysis Transplantation 29, no. 3 (October 24, 2013): 587–94. http://dx.doi.org/10.1093/ndt/gft423.

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4

Amundsen, S. S., M. K. Viken, L. M. Sollid, and B. A. Lie. "Coeliac disease-associated polymorphisms influence thymic gene expression." Genes & Immunity 15, no. 6 (May 29, 2014): 355–60. http://dx.doi.org/10.1038/gene.2014.26.

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Zhao, N. N., S. Lin, Z. Q. Wang, and T. J. Zhang. "VLDLR gene polymorphism associated with abdominal fat in Gaoyou domestic duck breed." Czech Journal of Animal Science 60, No. 4 (July 15, 2016): 178–84. http://dx.doi.org/10.17221/8132-cjas.

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Sapir-Koren, Rony, Gregory Livshits, Tania Landsman, Kobyliansky, and Eugene. "Bone Mineral Density is Associated with Estrogen Receptor Gene Polymorphism in Men." Anthropologischer Anzeiger 59, no. 4 (January 18, 2002): 343–53. http://dx.doi.org/10.1127/anthranz/59/2002/343.

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Freedman, Barry I., and Karl Skorecki. "Gene–Gene and Gene–Environment Interactions in Apolipoprotein L1 Gene-Associated Nephropathy." Clinical Journal of the American Society of Nephrology 9, no. 11 (June 5, 2014): 2006–13. http://dx.doi.org/10.2215/cjn.01330214.

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Yacubian, J., T. Sommer, K. Schroeder, J. Glascher, R. Kalisch, B. Leuenberger, D. F. Braus, and C. Buchel. "Gene gene interaction associated with neural reward sensitivity." Proceedings of the National Academy of Sciences 104, no. 19 (May 2, 2007): 8125–30. http://dx.doi.org/10.1073/pnas.0702029104.

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Bhatnager, Richa, Ranjeet Kaur, and Amita Suneja Dang Twinkle Dahiya. "Computational prediction of damage associated non synonymous SNPs of CYP17A1 and CYP19A1 gene." International Journal of Trend in Scientific Research and Development Volume-1, Issue-6 (October 31, 2017): 635–46. http://dx.doi.org/10.31142/ijtsrd3581.

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10

Thuong, N. T. T., T. R. Hawn, T. T. H. Chau, N. D. Bang, N. T. B. Yen, G. E. Thwaites, Y. Y. Teo, et al. "Epiregulin (EREG) variation is associated with susceptibility to tuberculosis." Genes & Immunity 13, no. 3 (December 15, 2011): 275–81. http://dx.doi.org/10.1038/gene.2011.83.

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Martínez-Nava, G. A., K. Torres-Poveda, A. Lagunas-Martínez, M. Bahena-Román, M. A. Zurita-Díaz, E. Ortíz-Flores, A. García-Carrancá, V. Madrid-Marina, and A. I. Burguete-García. "Cervical cancer-associated promoter polymorphism affects akna expression levels." Genes & Immunity 16, no. 1 (November 6, 2014): 43–53. http://dx.doi.org/10.1038/gene.2014.60.

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Hall, N. B., R. P. Igo, L. L. Malone, B. Truitt, A. Schnell, L. Tao, B. Okware, et al. "Polymorphisms in TICAM2 and IL1B are associated with TB." Genes & Immunity 16, no. 2 (December 18, 2014): 127–33. http://dx.doi.org/10.1038/gene.2014.77.

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Faltusová, Zuzana, Kateřina Vaculová, Jozef Pavel, Ilona Svobodová, Jana Hajšlová, and Jaroslava Ovesná. "Fusarium culmorum Tri genes and barley Hvugt13248 gene transcription in infected barley cultivars." Plant Protection Science 55, No. 3 (May 17, 2019): 172–80. http://dx.doi.org/10.17221/21/2018-pps.

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The transcription activities of genes somehow associated with the mycotoxin deoxynivalenol (DON) biosynthesis, namely Fusarium Tri genes, and the barley gene coding for UDP-glycosyltransferase (HvUGT13248) on different genetic backgrounds were compared. Determining the amount of the pathogen DNA was used as a useful tool for evaluating the infestation of barley cultivars. Amounts of the pathogen DNA differed in six barley cultivars infected by F. culmorum. Transcription of HvUGT13248 was related to DON content in the samples. Low pathogenic infection and low DON content were accompanied by increased Fusarium Tri10 transcription in resistant cv. Amulet. This finding confirmed our recent results and makes us propose using this change as a possible marker of barley resistance against Fusarium.

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Korman, B. D., M. I. Alba, J. M. Le, I. Alevizos, J. A. Smith, N. P. Nikolov, D. L. Kastner, E. F. Remmers, and G. G. Illei. "Variant form of STAT4 is associated with primary Sjögren's syndrome." Genes & Immunity 9, no. 3 (February 14, 2008): 267–70. http://dx.doi.org/10.1038/gene.2008.1.

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15

Bronson, P. G., P. P. Ramsay, M. F. Seldin, P. K. Gregersen, L. A. Criswell, and L. F. Barcellos. "CIITA is not associated with risk of developing rheumatoid arthritis." Genes & Immunity 12, no. 3 (January 20, 2011): 235–38. http://dx.doi.org/10.1038/gene.2010.67.

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Jehn, Birgit M., and Barbara A. Osborne. "Gene Regulation Associated with Apoptosis." Critical Reviews in Eukaryotic Gene Expression 7, no. 1-2 (1997): 179–93. http://dx.doi.org/10.1615/critreveukargeneexpr.v7.i1-2.100.

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17

Qiu, Xiaoyan, Graeme B. Martin, and Dominique Blache. "Gene polymorphisms associated with temperament." Journal of Neurogenetics 31, no. 1-2 (April 3, 2017): 1–16. http://dx.doi.org/10.1080/01677063.2017.1324857.

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18

Talan, Jamie. "Gene Mutations Associated with Longevity." Neurology Today 8, no. 7 (April 2008): 16. http://dx.doi.org/10.1097/01.nt.0000316145.43074.48.

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19

Stone, Louise. "Gene variants associated with formation." Nature Reviews Urology 12, no. 10 (September 1, 2015): 536. http://dx.doi.org/10.1038/nrurol.2015.220.

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20

Jung, Jeesun, Bin Sun, Deukwoo Kwon, Daniel L. Koller, and Tatiana M. Foroud. "Allelic-based gene-gene interaction associated with quantitative traits." Genetic Epidemiology 33, no. 4 (May 2009): 332–43. http://dx.doi.org/10.1002/gepi.20385.

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21

An, X., L. Bao, J. Hou, Y. Bai, X. Zhao, Y. Song, and B. Cao. "Two single nucleotide polymorphisms in the caprine GnIH gene are associated with litter size." Czech Journal of Animal Science 62, No. 7 (June 17, 2017): 269–75. http://dx.doi.org/10.17221/58/2016-cjas.

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Gonadotropin-inhibitory hormone (GnIH) can decrease luteinizing hormone and/or follicle-stimulating hormone levels in rat, mouse, sheep, and cattle by the direct suppression of gonadotropin-releasing hormone (GnRH). The present study investigated polymorphisms in the GnIH genes of two dairy goat breeds and their association with litter size. Single nucleotide polymorphisms (SNPs) g.1837C>G and g.3195G>A (GenBank Accession Nos. KR778885 and KR819142) were detected in the GnIH genes of Xinong Saanen and Guanzhong dairy goat breeds using DNA sequencing and polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP). Furthermore, the g.1837C>G and g.3195G>A loci were closely linked in both breeds (r<sup>2</sup> > 0.33). Association analysis showed that these SNPs had significant effects on the litter size of goats (P < 0.05). In both breeds, individuals with the CC/GG (g.1837C>G/g.3195G>A) genotype showed larger litter sizes in the second and average parities than individuals with the GG/AA genotype (P < 0.05). Known biochemical and physiological functions, along with our results, indicate that the CC/GG genotype may be used in marker-assisted selection to choose individuals with a larger litter size from both breeds.

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22

Mertz-Henning, L. M., A. I. Nagashima, F. C. Krzyzanowski, E. Binneck, and F. A. Henning. "Relative quantification of gene expression levels associated with lignin biosynthesis in soybean seed coat." Seed Science and Technology 43, no. 3 (December 15, 2015): 445–55. http://dx.doi.org/10.15258/sst.2015.43.3.13.

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23

Pointon, J. J., D. Harvey, T. Karaderi, L. H. Appleton, C. Farrar, and B. P. Wordsworth. "The histone demethylase JARID1A is associated with susceptibility to ankylosing spondylitis." Genes & Immunity 12, no. 5 (May 12, 2011): 395–98. http://dx.doi.org/10.1038/gene.2011.23.

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24

Eike, M. C., B. Skinningsrud, M. Ronninger, A. Stormyr, T. K. Kvien, G. Joner, P. R. Njølstad, et al. "CIITA gene variants are associated with rheumatoid arthritis in Scandinavian populations." Genes & Immunity 13, no. 5 (April 19, 2012): 431–36. http://dx.doi.org/10.1038/gene.2012.11.

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25

Misch, E. A., A. Verbon, J. M. Prins, S. J. Skerrett, and T. R. Hawn. "A TLR6 polymorphism is associated with increased risk of Legionnaires’ disease." Genes & Immunity 14, no. 7 (July 4, 2013): 420–26. http://dx.doi.org/10.1038/gene.2013.34.

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26

Seshadri, C., N. T. T. Thuong, N. T. B. Yen, N. D. Bang, T. T. H. Chau, G. E. Thwaites, S. J. Dunstan, and T. R. Hawn. "A polymorphism in human CD1A is associated with susceptibility to tuberculosis." Genes & Immunity 15, no. 3 (February 6, 2014): 195–98. http://dx.doi.org/10.1038/gene.2014.5.

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27

Qi, Y. Y., X. J. Zhou, F. J. Cheng, P. Hou, L. Zhu, S. F. Shi, L. J. Liu, J. C. Lv, and H. Zhang. "DEFA gene variants associated with IgA nephropathy in a Chinese population." Genes & Immunity 16, no. 3 (February 12, 2015): 231–37. http://dx.doi.org/10.1038/gene.2015.1.

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28

Paciolla, M., A. Pescatore, M. I. Conte, E. Esposito, M. Incoronato, M. B. Lioi, F. Fusco, and M. V. Ursini. "Rare mendelian primary immunodeficiency diseases associated with impaired NF-κB signaling." Genes & Immunity 16, no. 4 (March 12, 2015): 239–46. http://dx.doi.org/10.1038/gene.2015.3.

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29

Gaudet, D. A., Z. X. Lu, M. Frick, B. Puchalski, and A. Laroche. "Defence responses and associated signalling pathways associated with the Bt10 gene in wheat for resistance to Tilletia tritici, the common bunt pathogen." Czech Journal of Genetics and Plant Breeding 42, Special Issue (August 1, 2012): 4. http://dx.doi.org/10.17221/6218-cjgpb.

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30

Bjørnvold, M., M. C. Munthe-Kaas, T. Egeland, G. Joner, K. Dahl-Jørgensen, P. R. Njølstad, H. E. Akselsen, et al. "A TLR2 polymorphism is associated with type 1 diabetes and allergic asthma." Genes & Immunity 10, no. 2 (January 15, 2009): 181–87. http://dx.doi.org/10.1038/gene.2008.100.

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31

Fry, A. E., S. Auburn, M. Diakite, A. Green, A. Richardson, J. Wilson, M. Jallow, et al. "Variation in the ICAM1 gene is not associated with severe malaria phenotypes." Genes & Immunity 9, no. 5 (June 5, 2008): 462–69. http://dx.doi.org/10.1038/gene.2008.38.

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32

Douglas, K. B., D. C. Windels, J. Zhao, A. V. Gadeliya, H. Wu, K. M. Kaufman, J. B. Harley, et al. "Complement receptor 2 polymorphisms associated with systemic lupus erythematosus modulate alternative splicing." Genes & Immunity 10, no. 5 (April 23, 2009): 457–69. http://dx.doi.org/10.1038/gene.2009.27.

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33

Thuong, N. T. T., T. T. B. Tram, T. D. Dinh, P. V. K. Thai, D. Heemskerk, N. D. Bang, T. T. H. Chau, et al. "MARCO variants are associated with phagocytosis, pulmonary tuberculosis susceptibility and Beijing lineage." Genes & Immunity 17, no. 7 (November 17, 2016): 419–25. http://dx.doi.org/10.1038/gene.2016.43.

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34

Field, J., A. Fox, M. A. Jordan, A. G. Baxter, T. Spelman, M. Gresle, H. Butzkueven, T. J. Kilpatrick, and J. P. Rubio. "Interleukin-2 receptor-α proximal promoter hypomethylation is associated with multiple sclerosis." Genes & Immunity 18, no. 2 (January 12, 2017): 59–66. http://dx.doi.org/10.1038/gene.2016.50.

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35

Diaz, J. P., S. Kehoe, D. Thapi, N. Rosales, X. Ma, X. J. Yan, and D. R. Spriggs. "The MUC16 mucin gene upregulates gene transcripts associated with invasion." Journal of Clinical Oncology 25, no. 18_suppl (June 20, 2007): 21057. http://dx.doi.org/10.1200/jco.2007.25.18_suppl.21057.

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21057 Background: The MUC16 gene encodes the CA125 ovarian cancer antigen and may play a role in invasion. The aim of this study is to investigate the properties of MUC16 in vitro. Methods: PCR was used to create a DNA construct, MUC16–1R-GFP, containing all of the MUC 16 sequence proximal to the second cysteine loop repeat and a GFP-vector construct. SKOv-3 and T-80 cell lines were selected because they are negative for immunologically active CA125. Transfections were performed utilizing the phrGFP II C vector system. Stable transfectants were sorted for GFP by FACS and were grown as populations. The growth rate of the transfected populations were compared to vector only. Periodically the stable transfectants were analyzed by FACS for GFP and OC125 mAb. The in vitro invasive potential was examined, using a Matrigel® invasion assay. RT PCR was used to examine the effect of MUC16 constructs for a panel of invasion focused genes. Immunoblotting was performed on the 1R protein and probed for all genes that were significantly changed on RT PCR. Results: The SKOv-3 1R transfected cell lines produce measurable CA125 into the cell culture medium (4–10 U/mL) while T-80 1R cell lines did not. Analysis of the in vitro growth rate did not demonstrate any difference between the transfectant and vector only cell lines. The 1R-GFP transfected lines showed MUC16 cell surface expression by FACS analysis. Invasion assay of the MUC16 transfectants demonstrated substantially more invasive potential than vector only (SKOV-3: 36% vs. 15% invasion; T-80: 35% vs. 23% invasion). Several transcripts associated with invasion and metastasis were up-regulated 3–9 fold including CDH1, FN1, IL1B, MMP7 and MMP9. Transcripts for the tyrosine kinases SYK and HTATIP2 were down-regulated 16–20 fold respectively. Western immunoblotting confirmed the RT PCR findings. Conclusions: The1R-GFP construct did not alter the growth rate of transfectants in vitro; however; the SKOV-3 1R and T-80 1R cell line did have substantially more invasive potential than vector only. Five transcripts associated with invasion were up-regulated, and 2 transcripts for kinases were down-regulated in the transfected cell lines. These data supports an association between MUC 16 and invasive potential. No significant financial relationships to disclose.

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36

Othman, Maha, and Jonas Emsley. "Gene of the issue: GP1BA gene mutations associated with bleeding." Platelets 28, no. 8 (September 29, 2017): 832–36. http://dx.doi.org/10.1080/09537104.2017.1361526.

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37

Asselman, Jana, Dieter I. M. De Coninck, Michael E. Pfrender, and Karel A. C. De Schamphelaere. "Gene Body Methylation Patterns inDaphniaAre Associated with Gene Family Size." Genome Biology and Evolution 8, no. 4 (March 26, 2016): 1185–96. http://dx.doi.org/10.1093/gbe/evw069.

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38

He, H., A. Isnard, B. Kouriba, S. Cabantous, A. Dessein, O. Doumbo, and C. Chevillard. "A STAT6 gene polymorphism is associated with high infection levels in urinary schistosomiasis." Genes & Immunity 9, no. 3 (February 14, 2008): 195–206. http://dx.doi.org/10.1038/gene.2008.2.

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39

Seldin, M. F., L. Qi, H. R. Scherbarth, C. Tian, M. Ransom, G. Silva, J. W. Belmont, et al. "Amerindian ancestry in Argentina is associated with increased risk for systemic lupus erythematosus." Genes & Immunity 9, no. 4 (April 10, 2008): 389–93. http://dx.doi.org/10.1038/gene.2008.25.

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40

Armstrong, D. L., A. Reiff, B. L. Myones, F. P. Quismorio, M. Klein-Gitelman, D. McCurdy, L. Wagner-Weiner, et al. "Identification of new SLE-associated genes with a two-step Bayesian study design." Genes & Immunity 10, no. 5 (May 14, 2009): 446–56. http://dx.doi.org/10.1038/gene.2009.38.

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41

Douglas, K. B., D. C. Windels, J. Zhao, A. V. Gadeliya, H. Wu, K. M. Kaufman, J. B. Harley, et al. "Erratum: Complement receptor 2 polymorphisms associated with systemic lupus erythematosus modulate alternative splicing." Genes & Immunity 10, no. 6 (September 2009): 606. http://dx.doi.org/10.1038/gene.2009.42.

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42

Schaefer, A. S., G. M. Richter, M. Nothnagel, M. L. Laine, A. Rühling, C. Schäfer, N. Cordes, et al. "A 3′ UTR transition within DEFB1 is associated with chronic and aggressive periodontitis." Genes & Immunity 11, no. 1 (October 15, 2009): 45–54. http://dx.doi.org/10.1038/gene.2009.75.

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43

Bronson, P. G., B. A. Goldstein, P. P. Ramsay, K. B. Beckman, J. A. Noble, J. A. Lane, M. F. Seldin, et al. "The rs4774 CIITA missense variant is associated with risk of systemic lupus erythematosus." Genes & Immunity 12, no. 8 (May 26, 2011): 667–71. http://dx.doi.org/10.1038/gene.2011.36.

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44

West, T. E., W. Chierakul, N. Chantratita, D. Limmathurotsakul, V. Wuthiekanun, M. J. Emond, T. R. Hawn, S. J. Peacock, and S. J. Skerrett. "Toll-like receptor 4 region genetic variants are associated with susceptibility to melioidosis." Genes & Immunity 13, no. 1 (July 21, 2011): 38–46. http://dx.doi.org/10.1038/gene.2011.49.

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45

Sengupta, M., S. Liang, H.-H. S. Potula, L.-J. Chang, and L. Morel. "The SLE-associated Pbx1-d isoform acts as a dominant-negative transcriptional regulator." Genes & Immunity 13, no. 8 (September 20, 2012): 653–57. http://dx.doi.org/10.1038/gene.2012.43.

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46

Crosslin, D. R., D. S. Carrell, A. Burt, D. S. Kim, J. G. Underwood, D. S. Hanna, B. A. Comstock, et al. "Genetic variation in the HLA region is associated with susceptibility to herpes zoster." Genes & Immunity 16, no. 1 (October 9, 2014): 1–7. http://dx.doi.org/10.1038/gene.2014.51.

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47

Caballero-Franco, C., and S. Kissler. "The autoimmunity-associated gene RGS1 affects the frequency of T follicular helper cells." Genes & Immunity 17, no. 4 (March 31, 2016): 228–38. http://dx.doi.org/10.1038/gene.2016.16.

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48

Long, D., X. Deng, P. Singh, M. Loeb, A. S. Lauring, and M. Seielstad. "Identification of genetic variants associated with susceptibility to West Nile virus neuroinvasive disease." Genes & Immunity 17, no. 5 (May 12, 2016): 298–304. http://dx.doi.org/10.1038/gene.2016.21.

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49

Ovsyannikova, I. G., H. M. Salk, R. B. Kennedy, I. H. Haralambieva, M. T. Zimmermann, D. E. Grill, A. L. Oberg, and G. A. Poland. "Gene signatures associated with adaptive humoral immunity following seasonal influenza A/H1N1 vaccination." Genes & Immunity 17, no. 7 (August 18, 2016): 371–79. http://dx.doi.org/10.1038/gene.2016.34.

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50

Gabrielsen, I. S. M., M. K. Viken, S. S. Amundsen, H. Helgeland, K. Holm, S. T. Flåm, and B. A. Lie. "Autoimmune risk variants in ERAP2 are associated with gene-expression levels in thymus." Genes & Immunity 17, no. 7 (November 10, 2016): 406–11. http://dx.doi.org/10.1038/gene.2016.39.

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Journal articles on the topic 'Associated gene'

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