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Journal articles on the topic 'Anadara trapezia'

Author: Grafiati

Published: 4 June 2021

Last updated: 20 February 2023

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1

Jolley, Dianne F., William A. Maher, and Jennelle Kyd. "Selenium accumulation in the cockle Anadara trapezia." Environmental Pollution 132, no. 2 (November 2004): 203–12. http://dx.doi.org/10.1016/j.envpol.2004.04.026.

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2

Wright, Jeffrey T., James E. Byers, Loni P. Koukoumaftsis, and Paul E. Gribben. "Differences in anti-predator traits of a native bivalve following invasion by a habitat-forming seaweed." Marine and Freshwater Research 63, no. 3 (2012): 246. http://dx.doi.org/10.1071/mf11184.

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Invasive habitat-forming species cause large changes to the abiotic environment, which may lead to lethal and sublethal effects on native fauna. In this study, we tested whether morphological anti-predator traits of an infaunal bivalve, Anadara trapezia, differed between areas invaded by the habitat-forming seaweed Caulerpa taxifolia and uninvaded habitats in estuaries in New South Wales, Australia. Caulerpa changes the abiotic environment in ways that may affect traits of native species. In particular, there is lower water flow, lower dissolved oxygen in the water and sediments are more silty and anoxic than in unvegetated habitat. To test our hypotheses, we collected Anadara from Caulerpa and uninvaded habitats and measured shell thickness, shell strength and resistance to opening of valves. We found that all three traits were reduced in Anadara from Caulerpa habitat compared with Anadara from uninvaded habitats. These findings are consistent with the idea that trait modifications in native fauna in response to invasive habitat-forming species can potentially increase susceptibility to predation.

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3

Prentis, Peter J., and Ana Pavasovic. "The Anadara trapezia transcriptome: A resource for molluscan physiological genomics." Marine Genomics 18 (December 2014): 113–15. http://dx.doi.org/10.1016/j.margen.2014.08.004.

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4

Titchen, Deborah A., Wendy K. Glenn, Najah Nassif, Adrienne R. Thompson, and Edward O. P. Thompson. "A minor globin gene of the bivalve mollusc Anadara trapezia." Biochimica et Biophysica Acta (BBA) - Gene Structure and Expression 1089, no. 1 (May 1991): 61–67. http://dx.doi.org/10.1016/0167-4781(91)90085-z.

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5

Wright, Jeffrey T., Louise A. McKenzie, and Paul E. Gribben. "A decline in the abundance and condition of a native bivalve associated with Caulerpa taxifolia invasion." Marine and Freshwater Research 58, no. 3 (2007): 263. http://dx.doi.org/10.1071/mf06150.

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Caulerpa taxifolia is a fast-spreading invasive seaweed that threatens biodiversity in temperate Australian estuaries. To date, little is known about its effects on infauna. In the present study, we describe variation in demographic and life-history traits of the abundant infaunal bivalve, Anadara trapezia, in C. taxifolia and uninvaded habitats (seagrass and unvegetated sediments) at multiple sites across three estuaries in south-eastern New South Wales. Densities of A. trapezia were always lower in C. taxifolia than on unvegetated sediment, and lower in C. taxifolia than in seagrass at three out of four sites where they were compared. Dry tissue weight of A. trapezia was also lower in C. taxifolia than on unvegetated sediment at most sites, but was only lower in C. taxifolia than in seagrass at one of four sites. Populations were dominated by larger individuals (>45 mm length), but smaller individuals (35–45 mm length) were more common in C. taxifolia and seagrass. A. trapezia shell weight and morphology was variable and appeared weakly affected by invasion. Generally, our findings are consistent with the hypothesis that A. trapezia is negatively affected by C. taxifolia. However, C. taxifolia invasion appears complex and, at some places, its effects may not differ from those of native seagrass. There is a need for manipulative studies to understand the mechanisms underlying the effects of C. taxifolia on infauna.

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6

Nell, JA, and PJ Gibbs. "Salinity tolerance and absorption of L-Methionine by some Australian bivalve molluscs." Marine and Freshwater Research 37, no. 6 (1986): 721. http://dx.doi.org/10.1071/mf9860721.

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The salinity tolerance range of the scallop Pecten fumatus Reeve was 25-40 g 1-1, of the pipi (clam) Plebidonax deltoides (Lamarck) and the flat oyster Ostrea angasi Sowerby, 20-45 g I-1, and of the blue mussel Mytilus edulis planulatus Lamarck and the Sydney cockle Anadara trapezia (Deshayes), 15-45 g I-1. All of these bivalves absorbed substantial amounts of the amino acid L-methionine directly from seawater.

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7

Taylor, Anne M., and William A. Maher. "Exposure–dose–response of Anadara trapezia to metal contaminated estuarine sediments." Aquatic Toxicology 124-125 (November 2012): 152–62. http://dx.doi.org/10.1016/j.aquatox.2012.08.003.

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8

Mann, RG, WK Fisher, AT Gilbert, and EOP Thompson. "Genetic Variation of the Dimeric Haemoglobin of the Bivalve Mollusc Anadara trapezia." Australian Journal of Biological Sciences 39, no. 2 (1986): 109. http://dx.doi.org/10.1071/bi9860109.

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The bivalve mollusc A. trapezia has two haemoglobins, a tetrameric major haemoglobin, and a dimeric minor haemoglobin, the latter having two identical chains that are different from the chains in the tetramer. Genetic variation in the dimer results in two different haemoglobins, HbIIa and HbIIb, and it is known that the relative proportions of these two polymorphic forms vary with latitude along the eastern coastline of Australia. The HbIIb variant is more common at higher latitudes where water temperature may act as selecting agent. Comparative peptide mapping and amino acid analysis of peptides have shown that in HbIIa an aspartyl residue replaces the seryl residue found in HbIIb at residue 64, position E2 in the E helix. The E and F helices have recently been shown to be highly conserved in arcid globins and to be involved in subunit contacts in the cooperative dimers.

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9

Ulm, Sean, Melissa Carter, Jill Reid, and Ian Lilley. "Eurimbula Site 1, Curtis Coast: Site Report." Queensland Archaeological Research 11 (December 1, 1999): 105. http://dx.doi.org/10.25120/qar.11.1999.89.

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This site report presents an account of archaeological excavations undertaken at Eurimbula Site 1, a large open midden site complex located in Eurimbula National Park on the southern Curtis Coast, Central Queensland. Excavations yielded a cultural assemblage dominated by mud ark (Anadara trapezia) and commercial oyster (Saccostrea commercialis) and incorporating small quantities of stone artefacts, fish bone and charcoal. Densities of cultural material were found to decrease markedly with distance from the creek. Analyses of excavated material demonstrate extensive low intensity use of the site from at least c.3,200 cal BP to the historical period.

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10

Gilbert, AT, and EOP Thompson. "Amino Acid Sequence of the ß-Chain of the Tetrameric Haemoglobin of the Bivalve Mollusc, Anadara trapezia." Australian Journal of Biological Sciences 38, no. 3 (1985): 221. http://dx.doi.org/10.1071/bi9850221.

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The amino acid sequence of the iJ-chain of the principal haemoglobin from A. trapezia has been determined. The sequence was deduced from the sequences of tryptic peptides, which were fractionated using highperformance liquid chromatography and peptide mapping. Additional sequence data, particularly for the large tryptic peptides, was obtained from enzyme digests of both cyanogen bromide fragments and large citraconyitryptic peptides.

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11

Goede, A., C. Murray-Wallace, and E. Turner. "A diverse Holocene molluscan fauna including Anadara trapezia from Royal Park, Launceston, Tasmania." Papers and Proceedings of the Royal Society of Tasmania 127 (1993): 17–22. http://dx.doi.org/10.26749/rstpp.127.17.

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12

Hadfield, AJ, and DT Anderson. "Reproductive cycles of the bivalve molluscs Anadara trapezia (Deshayes), Venerupis crenata Lamarck and Anomia descripta Iredale in the Sydney region." Marine and Freshwater Research 39, no. 5 (1988): 649. http://dx.doi.org/10.1071/mf9880649.

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The female cycle of each species was described from gross gonad appearance, and quantitatively from oocyte counts. Males were assessed from external appearance and histological classification of the gonad. The timing of the male cycle is similar to that of the female in each species, Spawning in A. trapezia and A. descripta is associated with times of maximum phytoplankton availability. A. trapezia breeds during the summer when water temperatures are high; regeneration of the gonad takes place during winter and spring after a resting phase. A. descripta has two spawning peaks, a minor in summer and a major in autumn; regeneration of the gonad occurs from winter to late summer. V. crenata has a prolonged breeding season, with ripe animals occurring throughout the year, although activity decreases during the winter months; regeneration and maturation appear to occur cqntinuously with po resting phase. These reproductive patterns are discussed in the light of factors controlling reproduction in other bivalve species and strategies of other mollusc groups from the Sydney region.

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13

Reece, Kimberly S., Gail P. Scott, Cécile Dang, and Christopher F. Dungan. "A novel monoclonal Perkinsus chesapeaki in vitro isolate from an Australian cockle, Anadara trapezia." Journal of Invertebrate Pathology 148 (September 2017): 86–93. http://dx.doi.org/10.1016/j.jip.2017.05.007.

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14

Dang, C., CF Dungan, GP Scott, and KS Reece. "Perkinsus sp. infections and in vitro isolates from Anadara trapezia (mud arks) of Queensland, Australia." Diseases of Aquatic Organisms 113, no. 1 (February 10, 2015): 51–58. http://dx.doi.org/10.3354/dao02816.

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15

Taylor, Anne M., and William A. Maher. "Exposure–dose–response of Anadara trapezia to metal contaminated estuarine sediments. 1. Cadmium spiked sediments." Aquatic Toxicology 109 (March 2012): 234–42. http://dx.doi.org/10.1016/j.aquatox.2011.09.014.

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16

Taylor, Anne M., and William A. Maher. "Exposure–dose–response of Anadara trapezia to metal contaminated estuarine sediments. 2. Lead spiked sediments." Aquatic Toxicology 116-117 (July 2012): 79–89. http://dx.doi.org/10.1016/j.aquatox.2012.02.017.

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17

Dang, Cécile, Thomas H. Cribb, Geoffrey Osborne, Minami Kawasaki, Anne-Sophie Bedin, and Andrew C. Barnes. "Effect of a hemiuroid trematode on the hemocyte immune parameters of the cockle Anadara trapezia." Fish & Shellfish Immunology 35, no. 3 (September 2013): 951–56. http://dx.doi.org/10.1016/j.fsi.2013.07.010.

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18

Taylor, Anne M., William A. Maher, and Rodney P. Ubrihien. "Mortality, condition index and cellular responses of Anadara trapezia to combined salinity and temperature stress." Journal of Experimental Marine Biology and Ecology 497 (December 2017): 172–79. http://dx.doi.org/10.1016/j.jembe.2017.09.023.

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19

Nell, John A., Wayne A. O'Connor, Michael P. Heasman, and Lindsay J. Goard. "Hatchery production for the venerid clam Katelysia rhytiphora (Lamy) and the Sydney cockle Anadara trapezia (Deshayes)." Aquaculture 119, no. 2-3 (January 1994): 149–56. http://dx.doi.org/10.1016/0044-8486(94)90171-6.

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20

Murray-Wallace, C. V., A. G. Beu, G. W. Kendrick, L. J. Brown, A. P. Belperio, and J. E. Sherwood. "Palaeoclimatic implications of the occurrence of the arcoid bivalve Anadara trapezia (Deshayes) in the Quaternary of Australasia." Quaternary Science Reviews 19, no. 6 (February 2000): 559–90. http://dx.doi.org/10.1016/s0277-3791(99)00015-3.

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21

Taylor, Anne, and William Maher. "Developing a sentinel mollusc species for toxicity assessment: metal exposure, dose and response – laboratory v. field exposures and resident organisms." Environmental Chemistry 13, no. 3 (2016): 434. http://dx.doi.org/10.1071/en15104.

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Environmental contextMetal contamination in estuarine sediments can affect ecosystem health. Molluscs are commonly used as environmental indicators because they accumulate contaminants that cause adverse health effects. We investigated metal uptake and effects in the Sydney cockle, comparing exposure to contaminated lake sediments in situ and in laboratory aquariums. Although differences were observed between the different exposure types, all approaches were found to be valid for investigating metal health effects in this organism. AbstractRelationships between exposure, tissue dose and biological responses of the benthic marine bivalve Anadara trapezia to an estuarine sediment zinc, copper, lead, cadmium and selenium contamination gradient in Lake Macquarie, NSW, were evaluated using three approaches. Organisms were exposed to sediments in laboratory aquaria, caged in situ in the lake and lake resident organisms collected. Dose included total metal tissue burden and subcellular metal distribution to determine metabolically available metal. Response indices were total antioxidant capacity, lipid peroxidation, lysosomal stability and condition index. Bioaccumulation of total metals was higher in the laboratory and resident organisms than in those transplanted in the field but the contribution of individual metals to the total differed. Laboratory-exposed organisms had increased concentrations of cadmium and lead in their biologically active and detoxified metal fractions but not of the essential elements zinc and copper. Subcellular metal distribution patterns were the same in resident organisms but cadmium and lead burdens were higher in both fractions. Biomarker responses were similar in laboratory, transplanted and resident organisms. Total antioxidant capacity was significantly reduced and lipid peroxidation and lysosomal destabilisation significantly increased in all metal-exposed organisms compared with the reference A. trapezia. Condition index of laboratory-exposed organisms was significantly lower than in situ, resident and reference organisms. Clear metal exposure–dose–response relationships have been demonstrated for A. trapezia in laboratory and in situ experiments. Non-resident organisms, in both exposure scenarios, gave similar responses to resident metal-exposed organisms, showing all approaches are valid when investigating effects in this species.

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22

Birch, G. F., Y. Shalem, K. Lewtas, and C. H. Besley. "Metal concentrations in Sydney Cockle (Anadara trapezia) tissue and ambient sediment in a highly-modified estuary (Sydney estuary, Australia)." Marine Pollution Bulletin 144 (July 2019): 299–308. http://dx.doi.org/10.1016/j.marpolbul.2019.04.075.

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23

SUZUKI, Tomohiko, Yoshitada KAWASAKI, Tomikazu ARITA, and Akio NAKAMURA. "Two-domain haemoglobin of the blood clam Barbatia lima resulted from the recent gene duplication of the single-domain δ chain." Biochemical Journal 313, no. 2 (January 15, 1996): 561–66. http://dx.doi.org/10.1042/bj3130561.

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The blood clam Barbatia lima subsp. from Amami-Oshima, Japan, expresses three types of haemoglobins in erythrocytes: a tetramer (α2β2), a homodimer (∆2) and a polymer consisting of two kinds of chains, a 34 kDa two-domain (2D) globin and a ∆ chain. This is in sharp contrast to the congeneric clams B. reeveana (a North American species) and B. lima from Kochi, Japan, each containing a tetramer and a polymer consisting of the 2D globin, but not the ∆ chain. We have determined the cDNA-derived amino acid sequences of all four chains, α (163 residues), β (155 residues), ∆ (152 residues) and 2D (308 residues) of B. lima (Amami-Oshima). The α chain has an extremely long N-terminal extension of 20 residues that may form a ‘pre-A helix’, and this makes the α chain the longest known globin. B. lima α and β chains show about 50% sequence identity with the α and β chains, respectively, of tetrameric haemoglobin from a related clam, Anadara trapezia. The B. lima homodimeric ∆ chain shows 71-74% identity with each of the two domains of the 2D chain, but only 39% identity with the homodimeric γ chain of Anadara. In addition, the alignment of amino acid sequences of the ∆ chain and the two domains of the 2D chain revealed that the ∆ chain lacks one amino acid (Lys) at the C-terminus, suggesting that the C-terminal Lys (codon AAA or AAG) of the two domains of 2D chain could result from the stop codon TAA in the ∆ chain by nucleotide substitutions. These results, together with the fact that the ∆ and 2D chains form a polymeric haemoglobin, indicates that the ∆ chain is the ancestral single-domain globin for the 2D globin. The ∆ chain is expressed only in B. lima (Amami-Oshima), and appears to be a relic of molecular evolution.

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24

Nassif, Najah T., and Antony G. Mackinlay. "Detection and characterization of two novel hypervariable microsatellite repeat regions within intron 2 of the α-globin gene of the bivalve mollusc Anadara trapezia." Gene 183, no. 1-2 (January 1996): 225–30. http://dx.doi.org/10.1016/s0378-1119(96)00564-1.

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25

Kawasaki, Minami, Jerome Delamare-Deboutteville, Cecile Dang, and Andrew C. Barnes. "Hemiuroid trematode sporocysts are undetected by hemocytes of their intermediate host, the ark cockle Anadara trapezia: Potential role of surface carbohydrates in successful parasitism." Fish & Shellfish Immunology 35, no. 6 (December 2013): 1937–47. http://dx.doi.org/10.1016/j.fsi.2013.09.040.

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26

McHugh, Matthew J., Matt K. Broadhurst, David J. Sterling, Russell B. Millar, Greg Skilleter, and Steven J. Kennelly. "Relative benthic disturbances of conventional and novel otter boards." ICES Journal of Marine Science 72, no. 8 (June 1, 2015): 2450–56. http://dx.doi.org/10.1093/icesjms/fsv100.

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Abstract Reducing otter-board angle of attack (AOA) has been proposed as a way to limit the habitat impacts of demersal trawls, but there are few quantitative assessments. This study tested the hypothesis that a novel otter-board design, termed the “batwing” (comprising a 0.1-m wide sled with an offset sail at 20° AOA) would have relatively fewer bottom impacts than a conventional flat-rectangular otter board (35° AOA, with a similar hydrodynamic spreading force). Pairs of each otter board were suspended beneath a purpose-built rig comprising a beam and posterior semi-pelagic collection net and repeatedly deployed across established trawl grounds in an Australian estuary. Compared with the conventional otter boards, the batwings displaced significantly fewer empty shells (Anadara trapezia and Spisula trigonella) by 89% and school prawns (Metapenaeus macleayi) by up to 78%. These rates were similar to the difference in base-plate bottom contact (87%). Further, the batwing damaged proportionally fewer damaged shells, attributed to their displacement away from the board's surface area. Other debris (lighter pieces of wood) and benthic fish (bridled gobies, Arenigobius bifrenatus) were not as greatly mobilised (i.e. reduced by 50 and 25%, respectively); possibly due to their position on or slightly off the bottom, and a similar influence of hydrodynamic displacement by the hydro-vane surface areas. Although the consequences of reducing otter-board bottom contact largely remain unknown, low AOA designs like the batwing may represent a practical option for fisheries where trawling is perceived to be hazardous to sensitive habitats.

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27

Burt, A., W. Maher, A. Roach, F. Krikowa, P. Honkoop, and B. Bayne. "The accumulation of Zn, Se, Cd, and Pb and physiological condition of Anadara trapezia transplanted to a contamination gradient in Lake Macquarie, New South Wales, Australia." Marine Environmental Research 64, no. 1 (July 2007): 54–78. http://dx.doi.org/10.1016/j.marenvres.2006.12.009.

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28

Nassif, N. T., A. G. Mackinlay, and E. O. P. Thompson. "PCR amplification of partial mRNA sequences encoding the α- and β-globin chains of the bivalve mollusc Anadara trapezia: Correction of the C-terminal amino acid sequence of the α-chain." Comparative Biochemistry and Physiology Part B: Comparative Biochemistry 105, no. 2 (June 1993): 283–87. http://dx.doi.org/10.1016/0305-0491(93)90230-3.

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29

Atlanta, Viola, Reni Ambarwati, and Mujiono Nova. "Diversity of Bivalvia in Estuarine of Suramadu Bridge of Surabaya." Jurnal Moluska Indonesia 6, no. 1 (April 1, 2022): 1–11. http://dx.doi.org/10.54115/jmi.v6i1.52.

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The coast of the Suramadu Bridge is one of the important areas that has function as a route for transportation, recreation, as well as a protected area. However, the data of aquatic biota is rarely studied. One of them is bivalves. This research was conducted in February 2021 with the aim to analyze the diversity of bivalves in the Suramadu Coast. Observations and sampling were carried out in 3 transects 5 x 5 m based on different habitats. Five species of bivalves (Mimachlamys sanguinea, Anadara rhomboidalis, Tegillarca granosa, Barbatia trapezina, and Atrina pectinata) from three families (Pectinidae, Arcidae, and Pinnidae) were identified. The results of the community index show the individual distribution pattern and community stability in the medium category, there is a dominant species (Anadara rhomboidalis) but without significant differences in the number of individuals. This shows that the bivalves community is in a state of stress. A. rhomboidalis has the greatest role in the stability of the community, which can be seen from the value of the Important Value Index and the total volume of the shell. Recently, there are only two species that can be used sustainably, namely T. granosa and A. rhomboidalis.

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30

Scanes, P. "Trace metal uptake in cockles Anadara trapezium from Lake Macquarie, New South Wales." Marine Ecology Progress Series 95 (1993): 135–42. http://dx.doi.org/10.3354/meps095135.

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31

Scanes, P. "Trace metal uptake in cockles Anadara trapezium from Lake Macquarie, New South Wales." Marine Ecology Progress Series 102 (1993): 135–42. http://dx.doi.org/10.3354/meps102135.

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32

"Anadara trapezia." CABI Compendium CABI Compendium (January 7, 2022). http://dx.doi.org/10.1079/cabicompendium.94668.

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33

Louvard, C., R. D. Corner, S. C. Cutmore, and T. H. Cribb. "Evidence that host ecology drives first intermediate host use in the Didymozoidae (Trematoda: Hemiuroidea): an asexual infection in a vermetid (Gastropoda)." Journal of Helminthology 96 (2022). http://dx.doi.org/10.1017/s0022149x22000748.

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Abstract The Didymozoidae (Trematoda: Hemiuroidea) is among the most speciose trematode families, known from a wide range of marine teleost fishes. Despite their richness, however, didymozoid life cycles are unusually poorly known; only two first intermediate hosts are known, a marine bivalve (Anadara trapezia) and a pelagic gastropod (Firoloida desmarestia). This study uses multi-locus molecular sequence data to identify a novel first intermediate host for the family, a sessile gastropod of the genus Thylacodes Guettard (Vermetidae). The didymozoid infection is not identified to species but, based on molecular phylogenetic analyses, it is close to Saccularina magnacetabula Louvard et al., 2022, which uses a bivalve as a first intermediate host. The distribution of known first intermediate hosts of didymozoids (a bivalve, a holoplanktonic gastropod and a sessile gastropod that feeds with the use of mucus nets) suggests that first intermediate host use within the Didymozoidae has been opportunistically driven by the trophic ecology of potential mollusc hosts and has involved significant host-switching events.

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34

Nassif, N. T., W. K. Glenn, and A. G. Mackinlay. "The organization of the ?-globin gene of the bivalve mollusc Anadara trapezia and its evolutionary relationship to other invertebrate and vertebrate globin genes." Journal of Molecular Evolution 39, no. 1 (July 1994). http://dx.doi.org/10.1007/bf00178248.

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