Dissertations / Theses on the topic 'Amino Acid Sequence Homology'
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Menlove, Kit J. "Model Detection Based upon Amino Acid Properties." BYU ScholarsArchive, 2010. https://scholarsarchive.byu.edu/etd/2253.
Full textShah, Anuj R. "Improving protein remote homology detection using supervised and semi-supervised support vector machines." Online access for everyone, 2008. http://www.dissertations.wsu.edu/Dissertations/Spring2008/A_Shah_042408.pdf.
Full textWistrand, Markus. "Hidden Markov models for remote protein homology detection /." Stockholm, 2005. http://diss.kib.ki.se/2006/91-7140-598-4/.
Full textChelliah, Vijayalakshmi. "Functional restraints on amino acid substitution patterns : application to definition of binding sites and sequence-structure homology recognition." Thesis, University of Cambridge, 2005. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.615170.
Full textLindholm, Cecilia K. "Shb and its homologues : signaling in T lymphocytes and fibroblasts /." Uppsala : Acta Universitatis Upsaliensis : Univ.-bibl. [distributör], 2002. http://publications.uu.se/theses/91-554-5260-4/.
Full textSantos-Ciminera, Patricia Dantas Ciminera Patricia Dantas Santos Santos Patricia. "Molecular epidemiology of epidemic severe malaria caused by Plasmodium vivax in the state of Amazonas, Brazil /." Download the dissertation in PDF, 2005. http://www.lrc.usuhs.mil/dissertations/pdf/Santos2005.pdf.
Full textChu, Yi-wen 1962. "Amino acid sequence requirements for ornithine decarboxylase activity." Thesis, The University of Arizona, 1988. http://hdl.handle.net/10150/276838.
Full textForsberg, Hanna. "Genetic and biochemical characterization of a novel sensor of extracellular amino acids in yeast /." Stockholm : Karolinska Univ. Press, 2001. http://diss.kib.ki.se/2001/91-89428-06-4/.
Full textOppermann, Madalina. "Chemical and mass spectrometrical methods in protein analysis /." Stockholm, 2000. http://diss.kib.ki.se/2000/91-628-4542-x/.
Full textGallina, Serafina. "Structural Characterization of Donkey Lactoferrin: Amino Acid Sequence and Glycan Compositions." Doctoral thesis, Università di Catania, 2016. http://hdl.handle.net/10761/3880.
Full textCheng, Fang. "Development and application of strategies for the analysis of modification patterns in chondroitin and dermatana sulphate." Lund : Dept. of Cell and Molecular Biology, Lund University, 1997. http://catalog.hathitrust.org/api/volumes/oclc/39693809.html.
Full textGanapathy, Ashwin. "Computational analysis of protein identification using peptide mass fingerprinting approach /." free to MU campus, to others for purchase, 2004. http://wwwlib.umi.com/cr/mo/fullcit?p1426056.
Full textLi, Ran. "Signal peptide prediction in the space-frequency domain." Access to citation, abstract and download form provided by ProQuest Information and Learning Company; downloadable PDF file 0.44 Mb., 68 p, 2006. http://gateway.proquest.com/openurl?url_ver=Z39.88-2004&res_dat=xri:pqdiss&rft_val_fmt=info:ofi/fmt:kev:mtx:dissertation&rft_dat=xri:pqdiss:1432421.
Full textFalah, Mizied. "Evolutionary studies based on the 70-kDa heat shock family of protein sequences." Thesis, National Library of Canada = Bibliothèque nationale du Canada, 1997. http://www.collectionscanada.ca/obj/s4/f2/dsk2/tape16/PQDD_0012/NQ30084.pdf.
Full textVarmeh-Ziaie, Shohreh. "Cloning and characterization of a p53-inducible gene, WIG-1 /." Stockholm : [Karolinska institutets bibl.], 2001. http://diss.kib.ki.se/2001/91-7349-079-2/.
Full textWang, Yuqin. "Protein and lipid interactions of mammalian antibacterial peptides /." Stockholm, 2001. http://diss.kib.ki.se/2001/91-628-4698-1/.
Full textJonsson, Andreas. "Mass spectrometry in protein structure analysis /." Stockholm, 2001. http://diss.kib.ki.se/2001/91-628-4716-3/.
Full textLiu, Agatha H. "Motif-based mining of protein sequences /." Thesis, Connect to this title online; UW restricted, 2002. http://hdl.handle.net/1773/6894.
Full textSÌŒali, Andrej. "Modelling three-dimensional structure of a protein from its amino acid sequence." Thesis, Birkbeck (University of London), 1991. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.415316.
Full textTung, Wai Na Viola. "Sequence analysis and modelling of the gp130 cytokines and receptors." Click to view the E-thesis via HKUTO, 2004. http://sunzi.lib.hku.hk/hkuto/record/B31972251.
Full textTung, Wai Na Viola, and 董維娜. "Sequence analysis and modelling of the gp130 cytokines and receptors." Thesis, The University of Hong Kong (Pokfulam, Hong Kong), 2004. http://hub.hku.hk/bib/B31972251.
Full textSenekal, Frederick Petrus. "Protein secondary structure prediction using amino acid regularities." Diss., Pretoria : [s.n.], 2008. http://upetd.up.ac.za/thesis/available/etd-01232009-120040/.
Full textNdhlovu, Andrew, Scott Hazelhurst, and Pierre M. Durand. "Robust sequence alignment using evolutionary rates coupled with an amino acid substitution matrix." BioMed Central, 2015. http://hdl.handle.net/10150/610270.
Full textSilvia, Christopher Paul. "The isolation, partial peptide sequence, and cDNA sequence of aromatic L-amino acid decarboxylase from bovine adrenal medulla /." The Ohio State University, 1990. http://rave.ohiolink.edu/etdc/view?acc_num=osu1487677267729241.
Full textShenoy, Nalini. "Investigation of the replacement of cysteine residues in DOTA-(Tyr³)-octreotate synthesis, characterization and evaluation of biological activities /." Diss., Columbia, Mo. : University of Missouri-Columbia, 2006. http://hdl.handle.net/10355/4440.
Full textThe entire dissertation/thesis text is included in the research.pdf file; the official abstract appears in the short.pdf file (which also appears in the research.pdf); a non-technical general description, or public abstract, appears in the public.pdf file. Title from title screen of research.pdf file (viewed on August 8, 2007) In the 520 where natIn-DOTA⁰ appears nat should be superscripted. Includes bibliographical references.
McIninch, James David. "Prediction of protein coding regions in unannotated DNA sequences using an inhomogeneous Markov model of genetic information encoding." Diss., Georgia Institute of Technology, 1997. http://hdl.handle.net/1853/25224.
Full textKo, Ming-him. "A multi-agent model for DNA analysis /." Hong Kong : University of Hong Kong, 1999. http://sunzi.lib.hku.hk/hkuto/record.jsp?B21949116.
Full textMoreland, Rodney J. "Molecular interactions in RNA polymerase II and III transcription systems /." Full-text version available from OU Domain via ProQuest Digital Dissertations, 1998.
Find full textLópez, Ferrando Víctor. "Functional characterization of single amino acid variants." Doctoral thesis, Universitat de Barcelona, 2019. http://hdl.handle.net/10803/668545.
Full textLes mutacions puntuals d’aminoàcids són la principal causa de moltes malalties mendelianes, i juguen un paper important en el desenvolupament de moltes malalties complexes. Alhora, són el tipus de variant més comuna que afecta l’ADN codificant de proteïnes, sense provocar, en general, cap efecte advers. Amb l’adveniment de la seqüenciació de nova generació, la detecció d’aquestes variants en pacients i en la població general és més fàcil que mai, però la caracterització dels efectes funcionals de cada variant segueix sent un repte. El nostre objectiu en aquest treball és abordar aquest problema desenvolupant predictors de patologia in silico basats en l’aprenentatge automàtic. Prenent el predictor clàssic PMut com a punt de partida, hem repensat tot el procés d’aprenentatge supervisat, elaborant nous conjunts d’entrenament, descriptors i classificadors. PMut2017 és el primer resultat d’aquests esforços, un nou predictor basat en SwissVar i entrenat amb 12 mètriques de conservació de seqüència. La seva precisió, mesurada mitjançant validació creuada i amb tests cecs, s’ha mostrar en línia amb els millors predictors publicats a dia d’avui. Continuant els nostres esforços en la cerca de predictors més acurats, hem desenvolupat PMut-S, un conjunt de 215 predictors específics per cada proteïna. Similar a PMut en la seva concepció, PMut-S introdueix l’ús de descriptors basats en la coevolució i conjunts d’entrenament balancejats, millorant el rendiment de PMut2017 en 0.1 punts del coeficient de correlació de Matthews. Comparant PMut-S a d’altres predictors específics hem provat que és possible entrenar predictors específics seguint un únic procediment automatitzat i assolir uns resultats tan bon com els de la majoria de predictors específics publicats. La implementació del procediment d’aprenentatge automàtic tant de PMut com de PMut-S ha sigut publicat com a un mòdul de Python de codi obert: PyMut, el qual inclou les funcions que implementen el càlcul dels descriptors i la seva selecció, l’entrenament i avaluació dels classificadors, el dibuix de diverses gràfiques... Les prediccions també estan disponibles en un portal web que inclou un repositori precalculat amb els anàlisis de més de 700 milions de variants en més de 100 mil proteïnes humanes, junt a rellevant informació de context com visualitzacions 3D de les proteïnes, enllaços a bases de dades, anotacions funcionals i molt més.
Thompson, James. "Genetic algorithms applied to biological sequence analysis /." Link to online version, 2006. https://ritdml.rit.edu/dspace/handle/1850/2269.
Full textWang, Xiao-yu. "Deduced amino acid sequence and gene sequence of microvitellogenin, a female specific hemolymph and egg protein from the tobacco hornworm, Manduca sexta." Diss., The University of Arizona, 1988. http://hdl.handle.net/10150/184329.
Full textCronshaw, Andrew D. "Amino acid sequence studies of lysyl oxidase and TRAMP (tyrosine rich acidic matrix protein)." Thesis, University of Edinburgh, 1994. http://hdl.handle.net/1842/19663.
Full textCherry, Melissa A. "Sequence dependence of the activity of amphipathic peptides." View electronic thesis, 2008. http://dl.uncw.edu/etd/2008-2/rp/cherrym/melissacherry.pdf.
Full textTsoi, Carrie. "Cloning and characterization of canine sulfotransferases /." Stockholm, 2003. http://diss.kib.ki.se/2003/91-7349-679-0/.
Full textMcLennan, Neil F. "Studies on the carboxyl-terminal amino acid sequence of the chaperonin GroEL from Escherichia coli." Thesis, University of Edinburgh, 1993. http://hdl.handle.net/1842/11140.
Full textTolliver, Benjamin M., Devaiah P. Shivakumar, and Cecelia A. McIntosh. "Effects of Amino Acid Sequence Insertion on the Substrate Preference of a Citrus Paradisi Glucosyltransferase." Digital Commons @ East Tennessee State University, 2013. https://dc.etsu.edu/etsu-works/347.
Full textLeonchiks, Ainars. "Regulation of protein degradation by virus derived repeated amino acid sequences /." Stockholm, 2002. http://diss.kib.ki.se/2002/91-7349-206-x/.
Full textNanuwa, Sundeep. "Investigation into the role of sequence-driven-features and amino acid indices for the prediction of structural classes of proteins." Thesis, De Montfort University, 2013. http://hdl.handle.net/2086/9033.
Full textMaitland, Murray E. "A correlation between the distribution of biological apatite and amino acid sequence of type I collagen." Thesis, University of British Columbia, 1989. http://hdl.handle.net/2429/27591.
Full textMedicine, Faculty of
Graduate
Båvner, Ann. "Molecular mechanisms of transcriptional repression by the orphan receptor SHP /." Stockholm, 2005. http://diss.kib.ki.se/2005/91-7140-212-8/.
Full textPinali, Cristian. "Cross-correlation of amino acid sequence data to explain fibril formation in a number of collagen subtypes." Thesis, Cardiff University, 2008. http://orca.cf.ac.uk/54916/.
Full textBartfeld, Neil Stuart. "Isolation, characterization, cDNA cloning and deduced amino acid sequence of transferrin from the tobacco hornworm, Manduca sexta." Diss., The University of Arizona, 1990. http://hdl.handle.net/10150/185213.
Full textZhao, Jing. "Protein Structure Prediction Based on Neural Networks." Thèse, Université d'Ottawa / University of Ottawa, 2013. http://hdl.handle.net/10393/23636.
Full textBakeman, Valerie R. "Pacific and Atlantic coast mollusk shells chromatographic amino acid racemization kinetics and interlaboratory comparisons /." Access to citation, abstract and download form provided by ProQuest Information and Learning Company; downloadable PDF file 4.12 Mb., 271 p, 2006. http://catalog.hathitrust.org/api/volumes/oclc/133182881.html.
Full textNorin, Annika. "Medium chain dehydrogenases/reductases : alcohol dehydrogenases of novel types /." Stockholm, 2003. http://diss.kib.ki.se/2003/91-7349-675-8/.
Full textNg, Pauline Crystal. "PSSMs : not just roadkill on the information superhighway /." Thesis, Connect to this title online; UW restricted, 2002. http://hdl.handle.net/1773/8116.
Full textLutya, Portia Thandokazi. "Expression and purification of the novel protein domain DWNN." Thesis, University of the Western Cape, 2002. http://etd.uwc.ac.za/index.php?module=etd&.
Full textPiriyapongsa, Jittima. "Origin and evolution of eukaryotic gene sequences derived from transposable elements." Diss., Atlanta, Ga. : Georgia Institute of Technology, 2008. http://hdl.handle.net/1853/24766.
Full textCommittee Chair: Jordan, I. King; Committee Member: Borodovsky, Mark; Committee Member: Bunimovich, Leonid; Committee Member: Choi, Jung; Committee Member: McDonald, John.
Lin, Jasper Chua. "Application of the Trp-cage motif to polypeptide folding questions /." Thesis, Connect to this title online; UW restricted, 2007. http://hdl.handle.net/1773/8684.
Full textSankala, Marko. "Role of macrophage receptor MARCO in host defense /." Stockholm, 2003. http://diss.kib.ki.se/2003/91-7349-686-3.
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