Journal articles on the topic '180501 Assessment and management of benthic marine ecosystems'
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1
Duarte, Sofia, Barbara Leite, Maria Feio, Filipe Costa, and Ana Filipe. "Integration of DNA-Based Approaches in Aquatic Ecological Assessment Using Benthic Macroinvertebrates." Water 13, no. 3 (January 29, 2021): 331. http://dx.doi.org/10.3390/w13030331.
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Benthic macroinvertebrates are among the most used biological quality elements for assessing the condition of all types of aquatic ecosystems worldwide (i.e., fresh water, transitional, and marine). Current morphology-based assessments have several limitations that may be circumvented by using DNA-based approaches. Here, we present a comprehensive review of 90 publications on the use of DNA metabarcoding of benthic macroinvertebrates in aquatic ecosystems bioassessments. Metabarcoding of bulk macrozoobenthos has been preferentially used in fresh waters, whereas in marine waters, environmental DNA (eDNA) from sediment and bulk communities from deployed artificial structures has been favored. DNA extraction has been done predominantly through commercial kits, and cytochrome c oxidase subunit I (COI) has been, by far, the most used marker, occasionally combined with others, namely, the 18S rRNA gene. Current limitations include the lack of standardized protocols and broad-coverage primers, the incompleteness of reference libraries, and the inability to reliably extrapolate abundance data. In addition, morphology versus DNA benchmarking of ecological status and biotic indexes are required to allow general worldwide implementation and higher end-user confidence. The increased sensitivity, high throughput, and faster execution of DNA metabarcoding can provide much higher spatial and temporal data resolution on aquatic ecological status, thereby being more responsive to immediate management needs.
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SALOMIDI, M., S. KATSANEVAKIS, A. BORJA, U. BRAECKMAN, D. DAMALAS, I. GALPARSORO, R. MIFSUD, et al. "Assessment of goods and services, vulnerability, and conservation status of European seabed biotopes: a stepping stone towards ecosystem-based marine spatial management." Mediterranean Marine Science 13, no. 1 (February 28, 2012): 49. http://dx.doi.org/10.12681/mms.23.
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The goal of ecosystem-based marine spatial management is to maintain marine ecosystems in a healthy, productive and resilient condition; hence, they can sustainably provide the needed goods and services for human welfare. However, the increasing pressures upon the marine realm threaten marine ecosystems, especially seabed biotopes, and thus a well-planned approach of managing use of marine space is essential to achieve sustainability. The relative value of seabed biotopes, evaluated on the basis of goods and services, is an important starting point for the spatial management of marine areas. Herein, 56 types of European seabed biotopes and their related goods, services, sensitivity issues, and conservation status were compiled, the latter referring to management and protection tools which currently apply for these biotopes at European or international level. Fishing activities, especially by benthic trawls, and marine pollution are the main threats to European seabed biotopes. Increased seawater turbidity, dredged sediment disposal, coastal constructions, biological invasions, mining, extraction of raw materials, shipping-related activities, tourism, hydrocarbon exploration, and even some practices of scientific research, also exert substantial pressure. Although some first steps have been taken to protect the European sea beds through international agreements and European and national legislation, a finer scale of classification and assessment of marine biotopes is considered crucial in shaping sound priorities and management guidelines towards the effective conservation and sustainability of European marine resources.
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Marcelli, Marco, Sergio Scanu, Francesco Manfredi Frattarelli, Emanuele Mancini, and Filippo Maria Carli. "A Benthic Zonation System as a Fundamental Tool for Natural Capital Assessment in a Marine Environment: A Case Study in the Northern Tyrrhenian Sea, Italy." Sustainability 10, no. 10 (October 19, 2018): 3786. http://dx.doi.org/10.3390/su10103786.
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Coastal marine areas are characterized by the highest values of ecosystem services and by multiple uses that are often in conflict with each other. Natural capital analysis is claimed to be a valid tool to support space planning. In the context of the Marine Strategy Framework Directive (MSFD) of the European Union (EU), the EU Joint Research Centre (JRC) Scientific and Policy Report 2014 defines the monitoring of specific descriptors and their possible use, based on an ecosystem-services approach. Mediterranean marine ecosystems are characterized by high biodiversity and the presence of relevant benthic biocenosis that can be used as a tool to support coastal planning, conservation, and monitoring programs. In this study, we considered the Mediterranean benthic biocenosis, as classified by Pérès and Picard, as a working tool and propose a basic spatial unit for the assessment of marine ecosystem services. Focusing on a high-resolution local-scale analysis, this work presents an accurate identification of the different biocenoses for the coastal area of Civitavecchia in the Northern Tyrrhenian Sea, Italy, and ecosystem services, as well as a benefits assessment, of the Posidonia oceanica meadows.
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Pauli, Nora-Charlotte, Jana S. Petermann, Christian Lott, and Miriam Weber. "Macrofouling communities and the degradation of plastic bags in the sea: an in situ experiment." Royal Society Open Science 4, no. 10 (October 2017): 170549. http://dx.doi.org/10.1098/rsos.170549.
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The increasing amount of plastic littered into the sea may provide a new substratum for benthic organisms. These marine fouling communities on plastic have not received much scientific attention. We present, to our knowledge, the first comprehensive analysis of their macroscopic community composition, their primary production and the polymer degradation comparing conventional polyethylene (PE) and a biodegradable starch-based plastic blend in coastal benthic and pelagic habitats in the Mediterranean Sea. The biomass of the fouling layer increased significantly over time and all samples became heavy enough to sink to the seafloor. The fouling communities, consisting of 21 families, were distinct between habitats, but not between polymer types. Positive primary production was measured in the pelagic, but not in the benthic habitat, suggesting that large accumulations of floating plastic could pose a source of oxygen for local ecosystems, as well as a carbon sink. Contrary to PE, the biodegradable plastic showed a significant loss of tensile strength and disintegrated over time in both habitats. These results indicate that in the marine environment, biodegradable polymers may disintegrate at higher rates than conventional polymers. This should be considered for the development of new materials, environmental risk assessment and waste management strategies.
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Lejeune, Benjamin, Dorothée Kopp, Sonia Mehault, and Maud Aline Mouchet. "Assessing the diet and trophic level of marine fauna in a fishing ground subject to discarding activity using stable isotopes." PLOS ONE 17, no. 6 (June 7, 2022): e0268758. http://dx.doi.org/10.1371/journal.pone.0268758.
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Discarding practices have become a source of concern for the perennation of marine resources, prompting efforts of discard reduction around the globe. However, little is known about the fate of discards in marine environments. Discarding may provide food for various marine consumers, potentially affecting food web structure and stability. Yet, quantifying reliance upon discards is difficult because identity and frequency of discards may change according to multiple factors, and most previously used diet assessment techniques do not allow to assume consistency of feeding strategies over time. One currently untested hypothesis is that significant contribution of discards over time should reflect in increased trophic level (TL) of marine fauna, particularly in low TL consumers. Here, we explored this hypothesis by modeling the TL and assimilated diet of consumers living in fishing grounds subject to important discarding activity using stable isotope analysis. We found indications that benthic invertebrates and Chondrichthyes may depict a higher than expected TL, while other fish tend to depict similar to lower TL compared to global averages from the literature. Based on prior knowledge of discard consumption in the same area, stable isotope mixing models congruently revealed that discards may represent substantial portions of the assimilated diet of most benthic invertebrate macrofauna, cephalopods and Chondrichthyes. We highlight limitations and challenges of currently used diet assessment techniques to study discard consumption and stress that understanding their reintegration in marine food webs is crucial in the context of an ecosystem approach to fisheries management and to better understand the functioning of marine ecosystems subject to fishing.
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Demestre, Montserrat, Paolo Sartor, Alfredo Garcia-de-Vinuesa, Mario Sbrana, Francesc Maynou, and Andrea Massaro. "Ecological importance of survival of unwanted invertebrates discarded in different NW Mediterranean trawl fisheries." Scientia Marina 82, S1 (December 20, 2018): 189. http://dx.doi.org/10.3989/scimar.04784.28a.
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There is currently very little information on the survival of discards of unwanted and unregulated catches of invertebrates after the stresses caused by capture. A great number of the unregulated invertebrate species form the basis of essential fish habitats for important fisheries resources such as hake, red mullet and cuttlefish. Thus, data on their survival after discarding may help to interpret the role of these species within the benthic ecosystems. Furthermore, descriptor 6 of the Marine Strategy Framework Directive (EU Directive 2008/56/E) foresees maintaining sea floor integrity at a level that ensures that the structure and functions of the ecosystems are safeguarded, and Article 7(d) of the Common Fisheries Policy (EU Reg. 1380/2013) foresees the implementation of management measures for fishing with low impact on the marine ecosystem and fishery resources. Survival measurements by direct recovery of tagged discarded species are not effective in bottom trawl fisheries, for which alternative studies such as semi-quantitative measures obtained on board prior to discarding can be considered as appropriate for mortality estimation. The present work assessed the survival of unwanted species using a semi-quantitative assessment on the deck of trawlers and at the laboratory for a period of 96 hours in two Mediterranean areas (the Catalan coast and the Ligurian and Northern Tyrrhenian seas). A high number of discarded invertebrates showed a high percentage of survival (>70%) in both assessments. The results can be used to provide information that can help to achieve higher survival levels of discarded specimens and enhance the productivity of fishing grounds by increasing the health of benthic ecosystems.
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MAMO, BRIONY L. "Benthic Foraminifera from the Capricorn Group, Great Barrier Reef, Australia." Zootaxa 4215, no. 1 (December 23, 2016): 1. http://dx.doi.org/10.11646/zootaxa.4215.1.1.
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Effective reef management and monitoring has become increasingly important as anthropogenic processes impact upon natural ecosystems. One locality that is under direct threat due to human activities is the Australian Great Barrier Reef (GBR). Marine foraminifera represent an abundant and readily applicable tool that can be used in reef studies to investigate a variety of ecological parameters and assist in understanding reef dynamics and influence management protocols. The first step is to establish a baseline knowledge of taxonomic composition within the region to facilitate comparative studies and monitor how assemblages change in order to maximise effective management. A detailed taxonomic assessment is provided of 133 species of benthic foraminifera in 76 genera from Heron Island, One Tree Island, Wistari and Sykes Reefs, which form the core of the Capricorn Group (CG) at the southern end of the GBR. Of these 133 species, 46% belong to the order Miliolida, 34% to Rotaliida, 7% to Textulariida, 5% to Lagenida, 3% to Lituolida, 3% to Spirillinida, 1% to Loftusiida and 1% to Robertinida. Samples were collected from a variety of shallow shelf reef environments including reef flat, lagoonal and channel environments. Seventy species, representing the most abundant forms, are formally described with detailed distribution data for the remaining 63 species supplied.
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Turissa, Pragunanti, Nababan Bisman, Siregar Vincentius, Kushardono Dony, and Madduppa Hawis. "Evaluation Methods of Change Detection of Seagrass Beds in the Waters of Pajenekang and Gusung Selayar." Trends in Sciences 18, no. 23 (November 15, 2021): 677. http://dx.doi.org/10.48048/tis.2021.677.
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Knowledge about coastal and small island ecosystems is increasing for the monitoring of marine resources based on remote sensing. Remote sensing data provides up-to-date information with various resolutions when detecting changes in ecosystems. Studies have defined a shift in marine resources but were limited only to pixel or object classification in changes of seagrass area. In the present study, two classification method analysis approaches were compared to obtain optimum results in detecting changes in seagrass extent. It aimed to determine the dynamics of a seagrass ecosystem by comparing two classification methods in the waters of Gusung Island and Pajenekang, South Sulawesi, these methods being pixel-based and object-based classification methods. This research used SPOT-7 satellite imagery with 6 m2 of spatial resolution. Accuracy assessment using the confusion matrix showed optimum accuracy in object-based classification with an accuracy value of 87 %. Meanwhile, pixel-based classification showed an accuracy value of 78 % around Gusung Island. Pajenekang Island had accuracy values of 69 % with object-based classification and 65 % with pixel-based classification. A comparison of both classification methods revealed statistically high accuracy in mapping the benthic habitats of seagrass ecosystems. The results of the classifications showed a decline in the area of seagrass populations around Gusung Island from 2016 - 2018 and around Pajenekang Island from 2013 - 2017, with a change rate of 11.8 % around the island of Gusung and 7.6 % around the island of Pajenekang. This can explain the reason for the temporal method of object-based research classification having the best potential to process data changes in areas of seagrass in South Sulawesi waters and remote sensing information for the mapping of coastal area ecosystems.
HIGHLIGHTS
Information on coastal ecosystems globally with remote sensing data is currently very easy to access, but information related to ecosystem management and seagrass ecology in certain areas is still limited
Analysis of seagrass benthic changes in shallow water requires data processing methods with high accuracy
The OBIA (Object Based Image Analysis) method is one of the analytical methods that can provide optimal results in observing changes in seagrass ecosystems in the waters of South Sulawesi, Indonesia
GRAPHICAL ABSTRACT
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Paganelli, Daniela, Paola La Valle, Marina Pulcini, Raffaele Proietti, Luisa Nicoletti, Barbara La Porta, Loretta Lattanzi, Alfredo Pazzini, Monica Targusi, and Massimo Gabellini. "Towards an evaluation of physical loss pressure in the Italian seas for the implementation of the marine strategy framework directive." Journal of the Marine Biological Association of the United Kingdom 98, no. 1 (June 13, 2017): 61–69. http://dx.doi.org/10.1017/s0025315417000911.
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All over the world marine waters are under increasing pressure from human activities affecting marine ecosystems. Several EU Directives require assessment of the condition of marine environments; in particular the Marine Strategy Framework Directive (MSFD) applies an ecosystem approach to the management of human activities. In this context, the mapping of pressures in a standardized and comparable way is a critical step to assess the spatial pattern, the temporal change and the ecological impacts of human pressures. Within the MSFD, one of the stressors directly affecting the seafloor is the Physical Loss (PL) pressure, representing the permanent or long-term alteration of marine habitats. The main purpose of this study was to propose a method to estimate the spatial extent of PL pressure in the framework of the Initial Assessment phase of the MSFD. Furthermore, considering that human activities PL-related cause the loss of benthic habitats, and that the Mediterranean sea is characterized by sensitive and protected habitats such as the biogenic substrates sensu MSFD, the distribution of PL pressure was overlaid with the distribution of the seabed habitats to estimate the loss of biogenic substrates. This study represents a useful tool for establishing the baseline condition for PL pressure, to compare future conditions and to evaluate different management scenarios. Moreover, it allows identification of the areas where pressure tends to accumulate as ‘hot spots’ on which to focus in future impact analyses and the areas where few stressors are present.
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Gaichas, S. K., J. S. Link, and J. A. Hare. "A risk-based approach to evaluating northeast US fish community vulnerability to climate change." ICES Journal of Marine Science 71, no. 8 (April 8, 2014): 2323–42. http://dx.doi.org/10.1093/icesjms/fsu048.
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Abstract Risk assessment methods are used worldwide to evaluate threats posed by fisheries and other impacts on living marine resources, and to prioritize management of these threats. We derive a simplified risk analysis for aggregate fish communities as a preliminary tool to identify priorities for further detailed assessment. Because some of the largest observed rates of sea surface temperature increase are on the northeast US continental shelf, we focused on climate change-driven risks to marine communities in this region. We evaluated climate vulnerability for six communities across two ecosystems: both commercial and non-commercial demersal fish, pelagic fish, and benthic invertebrates in the Gulf of Maine (GOM) and Mid-Atlantic bight (MAB). We first evaluated the probability that anticipated climate changes (e.g. warming water, decreased salinity, increased acidity, altered boundary currents) would occur in these regions, and rated the potential severity of change over the next 10 years. Then, we evaluated the sensitivity of each biological community in each region using 12 attributes (e.g. habitat and prey specificity, temperature and acidity sensitivity, larval dispersal, adult mobility, population productivity, etc.). Exposure to the key climate risks was related to community sensitivity in each region for an overall assessment of climate vulnerability. Climate risks from increased surface water temperature, sea level rise, and earlier spring were rated moderate to high in both regions, with additional moderate to high risks in the GOM from increased bottom temperature, stratification, and river inputs. Benthic invertebrates were rated most sensitive, with demersals intermediate and pelagics lowest. Two MAB communities were rated more sensitive than corresponding GOM communities, but greater short-term climate risks in the GOM indicated increased exposure for GOM communities. Overall, this simple analysis may help prioritize short-term regional climate risk management action, thus addressing key conditions related to fishery fluctuations beyond fishing itself.
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Semprucci, F., C. Sbrocca, M. Rocchi, and M. Balsamo. "Temporal changes of the meiofaunal assemblage as a tool for the assessment of the ecological quality status." Journal of the Marine Biological Association of the United Kingdom 95, no. 2 (September 9, 2014): 247–54. http://dx.doi.org/10.1017/s0025315414001271.
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The Adriatic Sea, being a semi-closed and shallow basin, is more sensitive to anthropogenic impact than other areas of the Mediterranean Sea. Given the crucial role of meiofauna in the marine ecosystems, temporal series of data on this benthic assemblage are fundamental to give new insights into the health status of this basin. A data set (decade 2002–2012) on the meiofauna of two river mouths (Foglia and Metauro) close to a Natural Park (Monte San Bartolo, Central Adriatic Sea) has been analysed and related to several environmental parameters. In particular, changes in the meiofaunal structure, abundance and diversity have been investigated in order to evaluate possible variations of ecological quality status (EQS), in accordance with the Water Framework Directive. The structure of the meiofaunal assemblage appeared significantly different in the period studied, with a higher abundance of annelids in 2002 and an increase of nematodes in the following sampling campaigns. Among the faunal parameters, the Shannon and Pielou indices suggested a decline of the EQS over time, likely mainly due to the negative effect of chlorophyll-a peaks, which may highlight the influence of eutrophication phenomena and an enhancement of the organic matter supply. The lowering of the EQS of the study area suggests the need to intensify management and conservation efforts in the coastal systems, and supports the use of the meiofaunal assemblage as a useful bioindicator.
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Deinhart, Mari, Matthew S. Mills, and Tom Schils. "Community assessment of crustose calcifying red algae as coral recruitment substrates." PLOS ONE 17, no. 7 (July 22, 2022): e0271438. http://dx.doi.org/10.1371/journal.pone.0271438.
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Successful recruitment of invertebrate larvae to reef substrates is essential to the health of tropical coral reef ecosystems and to their capacity to recover from disturbances. Crustose calcifying red algae (CCRA) are a species rich group of seaweeds that have been identified as important recruitment substrates for scleractinian corals. Most studies on the settlement preference of coral larvae on CCRA use morphological species identifications that can lead to unreliable species identification and do not allow for examining species-specific interactions between coral larvae and CCRA. Accurate identifications of CCRA species is important for coral reef restoration and management to assess CCRA community composition and to detect CCRA species that are favored as coral recruitment substrates. In this study, DNA sequence analysis, was used to identify CCRA species to (1) investigate the species richness and community composition of CCRA on experimental coral recruitment tiles and (2) assess if the coral Acropora surculosa preferred any of these CCRA species as recruitment substrates. The CCRA community assemblages on the coral recruitment tiles was species-rich, comprising 27 distinct CCRA species of the orders Corallinales and Peyssonneliales which constitute new species records for Guam. Lithophylloideae sp. 1 (Corallinales) was the CCRA species that was significantly favored by coral larvae as a recruitment substrate. Lithophylloideae sp. 1 showed to hold a valuable ecological role for coral larval recruitment preference. Lithophylloideae sp. 1 had the highest benthic cover on the recruitment tiles and contained most A. surculosa recruits. DNA barcoding revealed a high taxonomic diversity of CCRA species on a microhabitat scale and provided detailed insight into the species-specific ecological interactions between CCRA and corals. With a steady decline in coral cover, detailed information on species interactions that drive reef recovery is valuable for the planning of marine management actions and restoration efforts.
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Glover, Adrian G., and Craig R. Smith. "The deep-sea floor ecosystem: current status and prospects of anthropogenic change by the year 2025." Environmental Conservation 30, no. 3 (September 2003): 219–41. http://dx.doi.org/10.1017/s0376892903000225.
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The goal of this paper is to review current impacts of human activities on the deep-sea floor ecosystem, and to predict anthropogenic changes to this ecosystem by the year 2025. The deep-sea floor ecosystem is one of the largest on the planet, covering roughly 60% of the Earth's solid surface. Despite this vast size, our knowledge of the deep sea is poor relative to other marine ecosystems, and future human threats are difficult to predict. Low productivity, low physical energy, low biological rates, and the vastness of the soft-sediment deep sea create an unusual suite of conservation challenges relative to shallow water. The numerous, but widely spaced, island habitats of the deep ocean (for example seamounts, hydrothermal vents and submarine canyons) differ from typical deep-sea soft sediments in substrate type (hard) and levels of productivity (often high); these habitats will respond differently to anthropogenic impacts and climate change. The principal human threats to the deep sea are the disposal of wastes (structures, radioactive wastes, munitions and carbon dioxide), deep-sea fishing, oil and gas extraction, marine mineral extraction, and climate change. Current international regulations prohibit deep-sea dumping of structures, radioactive waste and munitions. Future disposal activities that could be significant by 2025 include deep-sea carbon-dioxide sequestration, sewage-sludge emplacement and dredge-spoil disposal. As fish stocks dwindle in the upper ocean, deep-sea fisheries are increasingly targeted. Most (perhaps all) of these deep-sea fisheries are not sustainable in the long term given current management practices; deep-sea fish are long-lived, slow growing and very slow to recruit in the face of sustained fishing pressure. Oil and gas exploitation has begun, and will continue, in deep water, creating significant localized impacts resulting mainly from accumulation of contaminated drill cuttings. Marine mineral extraction, in particular manganese nodule mining, represents one of the most significant conservation challenges in the deep sea. The vast spatial scales planned for nodule mining dwarf other potential direct human impacts. Nodule-mining disturbance will likely affect tens to hundreds of thousands of square kilometres with ecosystem recovery requiring many decades to millions of years (for nodule regrowth). Limited knowledge of the taxonomy, species structure, biogeography and basic natural history of deep-sea animals prevents accurate assessment of the risk of species extinctions from large-scale mining. While there are close linkages between benthic, pelagic and climatic processes, it is difficult to predict the impact of climate change on deep-sea benthic ecosystems; it is certain, however, that changes in primary production in surface waters will alter the standing stocks in the food-limited, deep-sea benthic. Long time-series studies from the abyssal North Pacific and North Atlantic suggest that even seemingly stable deep-sea ecosystems may exhibit change in key ecological parameters on decadal time scales. The causes of these decadal changes remain enigmatic. Compared to the rest of the planet, the bulk of the deep sea will probably remain relatively unimpacted by human activities and climate change in the year 2025. However, increased pressure on terrestrial resources will certainly lead to an expansion of direct human activities in the deep sea, and to direct and indirect environmental impacts. Because so little is known about this remote environment, the deep-sea ecosystem may well be substantially modified before its natural state is fully understood.
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Nadtochy, Victor A., Nickolay V. Kolpakov, and Ilya A. Korneichuk. "Distribution of macrozoobenthic taxa - potential indicators of vulnerable marine ecosystems in the western part of Bering Sea. 1. Anadyr Bay area." Izvestiya TINRO 189, no. 2 (June 30, 2017): 156–70. http://dx.doi.org/10.26428/1606-9919-2017-189-156-170.
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Following recent tendencies in fisheries policy to ensure both sustainability of ecosystems and conservation of economically sustainable fisheries, protection of vulnerable resources with low direct economic value comes to the focus of fisheries management on ecosystem principles. One of the problems of modern fishing is a negative impact of bottom trawling because of destruction of benthic organisms vulnerable to mechanical impacts. This by-effect of fishing could affect negatively on functioning of bottom biocenoses, reproduction of exploited species, and decrease generally productivity of vulnerable marine ecosystems (VME). Potential VME indicators are determined for the area of the Anadyr Bay in the Bering Sea on the base of results of 4 benthic surveys using bottom sampler (1985, 2005) and bottom trawl (2008, 2012), as the most common species in some macrozoobenthic groups of epifauna. They are Gersemia rubiformis for soft corals, Myxilla incrustans , Halichondria panicea , Semisuberites cribrosa for sponges, Halocynthia aurantium , Boltenia ovifera for sea squirts, Cystisella saccata , Flustra foliacea for bryozoans, Chirona evermanni for barnacles, and Gorgonocephalus eucnemis for brittle stars. Their distribution is mapped. According to their life history and feeding habits, these species-indicators are divided onto two groups: immobile sestonophages (alcyonarians, sponges, ascidians, bryozoans, cirripedians) and mobile filtrators (brittle stars). The first group prevails on hard and mixed grounds mainly along southwestern and northeastern coasts of the Anadyr Bay at the depths of 80-90 m (sponges and bryozoans - to 250 m in the Navarin Canyon) with relatively warm water, active hydrodynamics and high biological productivity. The second group represented by G. eucnemis dominates on soft sediments in the central part of the Anadyr Bay with the depths of 50-270 m occupied by the cold water pool. Quantitative distribution of brittle star, on the one hand, and barnacles with sea squirts, on the other hand, is alternative to each other. On the contrary, barnacles, sponges and sea squirts have similar distribution of the biomass, being complementary species. Distribution patterns of all species-indicators are stable for many decades. However, biomass of some these species has changed in the southern Anadyr Bay between the similar surveys conducted in the 2008 and 2012: the mean biomass of barnacle Ch. evermanni and sea squirt H. aurantium had decreased in 6.5 and 3.7 times, respectively, whereas the mean biomass of sponges, brittle star G. eucnemis and sea squirt B. ovifera did not change. Bottom trawl fishery is not active in the northwestern Bering Sea, moreover, the habitats of immobile sestonophages with hard grounds are avoided by bottom trawlers being dangerous for fishing gears, so the observed decreasing of two species abundance is presumably caused by natural reasons or is a random error of the mosaic-distributed stocks assessment with insufficiently dense sampling grid.
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Summers, Gerard, Aaron Lim, and Andrew J. Wheeler. "A Characterisation of Benthic Currents from Seabed Bathymetry: An Object-Based Image Analysis of Cold-Water Coral Mounds." Remote Sensing 14, no. 19 (September 21, 2022): 4731. http://dx.doi.org/10.3390/rs14194731.
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Seabed sedimentary bedforms (SSBs) are strong indicators of current flow (direction and velocity) and can be mapped in high resolution using multibeam echosounders. Many approaches have been designed to automate the classification of such SSBs imaged in multibeam echosounder data. However, these classification systems only apply a geomorphological contextualisation to the data without making direct assertions on the velocities of benthic currents that form these SSBs. Here, we apply an object-based image analysis (OBIA) workflow to derive a geomorphological classification of SSBs in the Moira Mounds area of the Belgica Mound Province, NE Atlantic through k-means clustering. Cold-water coral reefs as sessile filter-feeders benefit from strong currents are often found in close association with sediment wave fields. This OBIA provided the framework to derive SSB wavelength and wave height, these SSB attributes were used as predictor variables for a multiple linear regression to estimate current velocities. Results show a bimodal distribution of current flow directions and current speed. Furthermore, a 5 k-means classification of the SSB geomorphology exhibited an imprinting of current flow consistency which altered throughout the study site due to the interaction of regional, local, and micro scale topographic steering forces. This study is proof-of-concept for an assessment tool applied to vulnerable marine ecosystems but has wider applications for applied seabed appraisals and can inform management and monitoring practice across a variety of spatial and temporal scales. Deriving spatial patterns of hydrodynamic processes from widely available multibeam echosounder maps is pertinent to many avenues of research including scour predictions for offshore structures such as wind turbines, sediment transport modelling, benthic fisheries, e.g., scallops, cable route and pipeline risk assessment and habitat mapping.
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Birch, Gavin F., and Marco A. Olmos. "Sediment-bound heavy metals as indicators of human influence and biological risk in coastal water bodies." ICES Journal of Marine Science 65, no. 8 (September 15, 2008): 1407–13. http://dx.doi.org/10.1093/icesjms/fsn139.
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AbstractBirch, G. F., and Olmos, M. A. 2008. Sediment-bound heavy metals as indicators of human influence and biological risk in coastal water bodies. – ICES Journal of Marine Science, 65: 1407–1413. Currently, many institutions are conducting or planning large, regional-scale ecosystem assessments of estuarine health. A full, integrated assessment of these environments requires a large suite of biological, physical, and chemical indicators, including sedimentary chemistry, ecotoxicology, benthic community structure, and bioaccumulation. This commitment is beyond the capacity of most organizations, and a simpler approach is required to accommodate limited financial resources. A case is made for the use of sedimentary heavy metals as an easy and inexpensive indicator. The advantages are that sediments identify the “pristine” condition and give baseline information against which future management strategies may be benchmarked, and that they differentiate solely human-induced change from natural variation. Sediment indicators in depositional environments are also less dynamic than those associated with water and biota. Our objective is to demonstrate that sediment-bound heavy metals data provide the spatial extent and magnitude of chemical change, as well as the risk of biological stress attributable to contamination in estuarine ecosystems. An assessment of this scheme involving seven New South Wales (Australia) estuaries suggests that sedimentary heavy-metal indicators used in a weight-of-evidence approach, with data collected during the recent Australian National Land and Water Resources Audit, enhances estuarine condition assessment.
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Nygård, Henrik, Mats Lindegarth, Alexander Darr, Grete E. Dinesen, Ole R. Eigaard, and Inga Lips. "Developing benthic monitoring programmes to support precise and representative status assessments: a case study from the Baltic Sea." Environmental Monitoring and Assessment 192, no. 12 (November 27, 2020). http://dx.doi.org/10.1007/s10661-020-08764-7.
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AbstractBenthic habitats and communities are key components of the marine ecosystem. Securing their functioning is a central aim in marine environmental management, where monitoring data provide the base for assessing the state of marine ecosystems. In the Baltic Sea, a > 50-year-long tradition of zoobenthic monitoring exists. However, the monitoring programmes were designed prior to the current policies, primarily to detect long-term trends at basin-scale and are thus not optimal to fulfil recent requirements such as area-based periodic status assessments. Here, we review the current monitoring programmes and assess the precision and representativity of the monitoring data in status assessments to identify routes for improvement. At present, the monitoring is focused on soft-bottoms, not accounting for all habitat types occurring in the Baltic Sea. Evaluating the sources of variance in the assessment data revealed that the component accounting for variability among stations forms the largest proportion of the uncertainty. Furthermore, it is shown that the precision of the status estimates can be improved, with the current number of samples. Reducing sampling effort per station, but sampling more stations, is the best option to improve precision in status assessments. Furthermore, by allocating the sampling stations more evenly in the sub-basins, a better representativity of the area can be achieved. However, emphasis on securing the long-term data series is needed if changes to the monitoring programmes are planned.
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Gros, Charley, Jan Jansen, Piers K. Dunstan, Dirk C. Welsford, and Nicole A. Hill. "Vulnerable, but Still Poorly Known, Marine Ecosystems: How to Make Distribution Models More Relevant and Impactful for Conservation and Management of VMEs?" Frontiers in Marine Science 9 (June 27, 2022). http://dx.doi.org/10.3389/fmars.2022.870145.
Full textAbstract:
Human activity puts our oceans under multiple stresses, whose impacts are already significantly affecting biodiversity and physicochemical properties. Consequently, there is an increased international focus on the conservation and sustainable use of oceans, including the protection of fragile benthic biodiversity hotspots in the deep sea, identified as vulnerable marine ecosystems (VMEs). International VME risk assessment and conservation efforts are hampered because we largely do not know where VMEs are located. VME distribution modelling has increasingly been recommended to extend our knowledge beyond sparse observations. Nevertheless, the adoption of VME distribution models in spatial management planning and conservation remains limited. This work critically reviews VME distribution modelling studies, and recommends promising avenues to make VME models more relevant and impactful for policy and management decision making. First, there is an important interplay between the type of VME data used to build models and how the generated maps can be used in making management decisions, which is often ignored by model-builders. Overall, there is a need for more precise VME data for production of reliable models. We provide specific guidelines for seven common applications of VME distribution modelling to improve the matching between the modelling and the user need. Second, the current criteria to identify VME often rely on subjective thresholds, which limits the transparency, transferability and effective applicability of distribution models in protection measures. We encourage scientists towards founding their models on: (i) specific and quantitative definitions of what constitute a VME, (ii) site conservation value assessment in relation to VME multi-taxon spatial predictions, and (iii) explicitly mapping vulnerability. Along with the recent increase in both deep-sea biological and environmental data quality and quantity, these modelling recommendations can lead towards more cohesive summaries of VME’s spatial distributions and their relative vulnerability, which should facilitate a more effective protection of these ecosystems, as has been mandated by numerous international agreements.
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Großelindemann, Hendrik, Svenja Ryan, Caroline C. Ummenhofer, Torge Martin, and Arne Biastoch. "Marine Heatwaves and Their Depth Structures on the Northeast U.S. Continental Shelf." Frontiers in Climate 4 (June 15, 2022). http://dx.doi.org/10.3389/fclim.2022.857937.
Full textAbstract:
Marine Heatwaves (MHWs) are ocean extreme events, characterized by anomalously high temperatures, which can have significant ecological impacts. The Northeast U.S. continental shelf is of great economical importance as it is home to a highly productive ecosystem. Local warming rates exceed the global average and the region experienced multiple MHWs in the last decade with severe consequences for regional fisheries. Due to the lack of subsurface observations, the depth-extent of MHWs is not well-known, which hampers the assessment of impacts on pelagic and benthic ecosystems. This study utilizes a global ocean circulation model with a high-resolution (1/20°) nest in the Atlantic to investigate the depth structure of MHWs and associated drivers on the Northeast U.S. continental shelf. It is shown that MHWs exhibit varying spatial extents, with some only occurring at depth. The highest intensities are found around 100 m depth with temperatures exceeding the climatological mean by up to 7°C, while surface intensities are typically smaller (around 3°C). Distinct vertical structures are associated with different spatial MHW patterns and drivers. Investigation of the co-variability of temperature and salinity reveals that over 80% of MHWs at depth (>50 m) coincide with extreme salinity anomalies. Two case studies provide insight into opposing MHW patterns at the surface and at depth, being forced by anomalous air-sea heat fluxes and Gulf Stream warm core ring interaction, respectively. The results highlight the importance of local ocean dynamics and the need to realistically represent them in climate models.
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Pochon, Xavier, Susie Wood, Javier Atalah, Lauren Fletcher, Olivier Laroche, John Pearman, Deanna Elvines, et al. "A validated protocol for fish farm monitoring using environmental DNA." ARPHA Conference Abstracts 4 (March 4, 2021). http://dx.doi.org/10.3897/aca.4.e65421.
Full textAbstract:
Sea-based fish farms are associated with strong benthic enrichment gradients and routine monitoring is usually required by regulation. Internationally a wide range of approaches exist for measuring the degree of benthic deterioration around fish farming activities, ranging from simple visual or odour assessments to the calculation of secondary indices that combine multiple biological and/or physico-chemical metrics (e.g., AZTI Marine Biotic Index; Invertebrate Species Index; Norwegian Quality Index; Infauna Trophic Index). In New Zealand, the health of marine benthic ecosystems around coastal salmon farms is currently measured using an Enrichment State (ES) index. This index incorporates physico-chemical (redox, organic matter, sulphates, etc.) and benthic macrofaunal measurements, which requires taxonomic expertise, is time consuming and expensive. Supported by a range of private/government agencies and industry partners, we have developed and tested the robustness of bacterial, eukaryotic, and multi-trophic Metabarcoding Biotic Indices (b-MBI, e-MBI, and mt-MBI, respectively) using a molecular Eco-Group approach. The indices were calculated via automatic computer pipelines using data collected over a period of nine years from a range of high- and low-flow salmon farms (12 farms and 60 stations) from three distinct regions in New Zealand. The MBIs were compared against the established ES index. All MBIs yielded strong and highly significant relationships with the ES index. The strongest relationships (R2 > 0.9) were obtained with the b-MBI. A refinement of the b-MBI (2019-2020) was supported by highly prolific microbes throughout the ES spectrum, and in particular in the upper end of the organic enrichment scale where traditional benthic indices tend to fail. This resulted in ES values of both (molecular-based versus morphology-based) indices to follow a near one-to-one relationship, performing consistently across water flow environments and considered sub-regions. Station-averaged results were also used to compare regulated compliance outcomes between the two indices, based on the current key compliance criteria for farms within each flow regime. Of the 67 seabed monitoring stations that were subsequently classified as compliant or non‑compliant, 62 stations had identical compliance outcomes (i.e. 92% of instances). Furthermore, the b-MBI showed consistently narrower (~50%) confidence interval bands when compared to the traditional ES index. The b-MBI offers unprecedented precision for determining subtle changes along enrichment gradients, constituting a valuable asset for triggering timely management responses and improving compliance. The protocols developed in this project enable rapid, standardised, and cost-effective eDNA isolation and extraction, followed by automatic b-MBI calculation. The affordability and versatility of the b-MBI tool suggests that it could be immediately integrated into current monitoring strategies as the primary benthic assessment tool for assessing benthic impacts of salmon farms in New Zealand.
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Nestorowicz, Iga-Maria, Frederico Oliveira, Pedro Monteiro, Luís Bentes, Nuno Sales Henriques, Ricardo Aguilar, Barbara Horta e Costa, and Jorge M. S. Gonçalves. "Identifying Habitats of Conservation Priority in the São Vicente Submarine Canyon in Southwestern Portugal." Frontiers in Marine Science 8 (September 22, 2021). http://dx.doi.org/10.3389/fmars.2021.672850.
Full textAbstract:
Identifying vulnerable marine habitats is fundamental to promote evidence-based management and a sustainable use of our oceans. Although progress in the mapping of marine benthic habitats has been made, complex ecosystems such as submarine canyons remain largely unexplored, hampering evidence-based management from taking place in these ubiquitous features worldwide. Data from a remotely operated vehicle (ROV) survey in the upper São Vicente Submarine Canyon in southwestern Portugal from 2011, was analysed to carry out a comprehensive assessment of megabenthic habitats, particularly those of conservation concern occuring between 90 and 560 m. Underwater videos from three exploratory dives, covering a total of 8.8 kilometers, were analyzed through multivariate and visual assessments, and the identified habitats were assessed against a set of criteria derived from current definitions of priority habitats. Thirteen potential priority habitats were characterized, out of which four distinct “coral gardens” and one “deep-sea sponge aggregation” are aligned with OSPAR definitions of priority habitats, and one corresponds to the habitat of a strictly protected sea urchin listed in the Habitats Directive. Three circalittoral sponge aggregations were also suggested based on the abundance of indicator species. The specific composition and diversity of priority habitats as described here, has not yet been described in any other canyon in the NE Atlantic region. Depth was revealed to be particularly important for the distribution of habitats, followed by relief and substratum. The approach presented in this study contributes to improve the understanding about submarine canyons, which is paramount to implement knowledge-based protection measures. Furthermore, it can be used to support future mapping efforts of deep-sea environments such as submarine canyons.