Zeitschriftenartikel zum Thema „Transcriptomic data management“
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Ortiz, Randy, Priyanka Gera, Christopher Rivera und Juan C. Santos. „Pincho: A Modular Approach to High Quality De Novo Transcriptomics“. Genes 12, Nr. 7 (22.06.2021): 953. http://dx.doi.org/10.3390/genes12070953.
Der volle Inhalt der QuelleHynst, Jakub, Karla Plevova, Lenka Radova, Vojtech Bystry, Karol Pal und Sarka Pospisilova. „Bioinformatic pipelines for whole transcriptome sequencing data exploitation in leukemia patients with complex structural variants“. PeerJ 7 (12.06.2019): e7071. http://dx.doi.org/10.7717/peerj.7071.
Der volle Inhalt der QuelleKrishnan, Vidya S., und Sulev Kõks. „Transcriptional Basis of Psoriasis from Large Scale Gene Expression Studies: The Importance of Moving towards a Precision Medicine Approach“. International Journal of Molecular Sciences 23, Nr. 11 (30.05.2022): 6130. http://dx.doi.org/10.3390/ijms23116130.
Der volle Inhalt der QuelleSauta, Elisabetta, Matteo Zampini, Daniele Dall'Olio, Claudia Sala, Gabriele Todisco, Erica Travaglino, Luca Lanino et al. „Combining Gene Mutation with Transcriptomic Data Improves Outcome Prediction in Myelodysplastic Syndromes“. Blood 142, Supplement 1 (28.11.2023): 1863. http://dx.doi.org/10.1182/blood-2023-186222.
Der volle Inhalt der QuelleDunn, Jemma, Vasileios P. Lenis, David A. Hilton, Rolf Warta, Christel Herold-Mende, C. Oliver Hanemann und Matthias E. Futschik. „Integration and Comparison of Transcriptomic and Proteomic Data for Meningioma“. Cancers 12, Nr. 11 (05.11.2020): 3270. http://dx.doi.org/10.3390/cancers12113270.
Der volle Inhalt der QuelleHuang, Kexin, Yun Zhang, Haoran Gong, Zhengzheng Qiao, Tiangang Wang, Weiling Zhao, Liyu Huang und Xiaobo Zhou. „Inferring evolutionary trajectories from cross-sectional transcriptomic data to mirror lung adenocarcinoma progression“. PLOS Computational Biology 19, Nr. 5 (25.05.2023): e1011122. http://dx.doi.org/10.1371/journal.pcbi.1011122.
Der volle Inhalt der QuelleChen, Huapu, Zhiyuan Li, Yaorong Wang, Hai Huang, Xuewei Yang, Shuangfei Li, Wei Yang und Guangli Li. „Comparison of Gonadal Transcriptomes Uncovers Reproduction-Related Genes with Sexually Dimorphic Expression Patterns in Diodon hystrix“. Animals 11, Nr. 4 (07.04.2021): 1042. http://dx.doi.org/10.3390/ani11041042.
Der volle Inhalt der QuelleLindholm-Perry, Amanda. „90 Leveraging the Potential of Molecular and Genetic Markers to Improve Feed Efficiency in Beef Cattle“. Journal of Animal Science 101, Supplement_3 (06.11.2023): 94–95. http://dx.doi.org/10.1093/jas/skad281.115.
Der volle Inhalt der QuelleBao, Riyue, Lei Huang, Jorge Andrade, Wei Tan, Warren A. Kibbe, Hongmei Jiang und Gang Feng. „Review of Current Methods, Applications, and Data Management for the Bioinformatics Analysis of Whole Exome Sequencing“. Cancer Informatics 13s2 (Januar 2014): CIN.S13779. http://dx.doi.org/10.4137/cin.s13779.
Der volle Inhalt der QuelleFranses, Joseph W., Michael J. Raabe, Amaya Pankaj, Bidish Patel, Avril Coley, Irun Bhan, Martin Aryee und David T. Ting. „Abstract PO016: Spatial transcriptomic profiling to characterize the tumor-vascular interactome of hepatocellular carcinoma“. Clinical Cancer Research 28, Nr. 17_Supplement (01.09.2022): PO016. http://dx.doi.org/10.1158/1557-3265.liverca22-po016.
Der volle Inhalt der QuelleRoumani, Marwa, Jacques Le Bot, Michel Boisbrun, Florent Magot, Arthur Péré, Christophe Robin, Frédérique Hilliou und Romain Larbat. „Transcriptomics and Metabolomics Analyses Reveal High Induction of the Phenolamide Pathway in Tomato Plants Attacked by the Leafminer Tuta absoluta“. Metabolites 12, Nr. 6 (26.05.2022): 484. http://dx.doi.org/10.3390/metabo12060484.
Der volle Inhalt der QuelleManem, Venkata S. K., Olga Sazonova, Andréanne Gagné, Michèle Orain, Babak Khoshkrood-Mansoori, Nathalie Gaudreault, Yohan Bossé und Philippe Joubert. „Unravelling actionable biology using transcriptomic data to integrate mitotic index and Ki-67 in the management of lung neuroendocrine tumors“. Oncotarget 12, Nr. 3 (02.02.2021): 209–20. http://dx.doi.org/10.18632/oncotarget.27874.
Der volle Inhalt der QuelleGuo, Eddie, Pouria Torabi, Daiva E. Nielsen und Matthew Pietrosanu. „Deep learning transcriptomic model for prediction of pan-drug chemotherapeutic sensitivity“. STEM Fellowship Journal 7, Nr. 1 (01.12.2021): 40–53. http://dx.doi.org/10.17975/sfj-2021-013.
Der volle Inhalt der QuelleCarreras, Joaquim. „Artificial Intelligence Analysis of Ulcerative Colitis Using an Autoimmune Discovery Transcriptomic Panel“. Healthcare 10, Nr. 8 (05.08.2022): 1476. http://dx.doi.org/10.3390/healthcare10081476.
Der volle Inhalt der QuelleTana, Michele May-Sien, Arielle Klepper, Amy Lyden, Angela Oliveira Pisco, Maira Phelps, Breann McGee, Kelsey Green et al. „Transcriptomic profiling of blood from autoimmune hepatitis patients reveals potential mechanisms with implications for management“. PLOS ONE 17, Nr. 3 (21.03.2022): e0264307. http://dx.doi.org/10.1371/journal.pone.0264307.
Der volle Inhalt der QuelleGuo, Qi. „#277 : Transcriptome Analysis Revealed a Delayed and Attenuated Estrogen Response in IUA Patients“. Fertility & Reproduction 05, Nr. 04 (Dezember 2023): 724. http://dx.doi.org/10.1142/s2661318223744302.
Der volle Inhalt der QuelleOrtigosa, Francisco, Concepción Ávila, Lourdes Rubio, Lucía Álvarez-Garrido, José A. Carreira, Rafael A. Cañas und Francisco M. Cánovas. „Transcriptome Analysis and Intraspecific Variation in Spanish Fir (Abies pinsapo Boiss.)“. International Journal of Molecular Sciences 23, Nr. 16 (19.08.2022): 9351. http://dx.doi.org/10.3390/ijms23169351.
Der volle Inhalt der QuelleRahmat, Nur Lina, Anis Nadyra Zifruddin, Cik Mohd Rizuan Zainal Abidin, Nor-Azlan Nor Muhammad und Maizom Hassan. „The Developmental Transcriptome of Bagworm, Metisa plana (Lepidoptera: Psychidae) and Insights into Chitin Biosynthesis Genes“. Genes 12, Nr. 1 (23.12.2020): 7. http://dx.doi.org/10.3390/genes12010007.
Der volle Inhalt der QuelleManem, Venkata S. K., Olga Sazonova, Andréanne Gagné, Michèle Orain, Babak Khoshkrood-Mansoori, Nathalie Gaudreault, Yohan Bossé und Philippe Joubert. „Addendum: Unravelling actionable biology using transcriptomic data to integrate mitotic index and Ki-67 in the management of lung neuroendocrine tumors“. Oncotarget 13, Nr. 1 (01.01.2022): 1302. http://dx.doi.org/10.18632/oncotarget.28321.
Der volle Inhalt der QuelleNguyen, HD, A. Allaire, P. Diamandis, M. Bisaillon, MS Scott und M. Richer. „A Machine Learning Analysis of TCGA Expression Data to Finding Signatures for “Normal-Like” IDH-WT Diffuse Gliomas with a Longer Survival“. Canadian Journal of Neurological Sciences / Journal Canadien des Sciences Neurologiques 48, s1 (Mai 2021): S2. http://dx.doi.org/10.1017/cjn.2021.88.
Der volle Inhalt der QuelleBerrios, Daniel C., Jonathan Galazka, Kirill Grigorev, Samrawit Gebre und Sylvain V. Costes. „NASA GeneLab: interfaces for the exploration of space omics data“. Nucleic Acids Research 49, Nr. D1 (20.10.2020): D1515—D1522. http://dx.doi.org/10.1093/nar/gkaa887.
Der volle Inhalt der QuelleLi, Shuxin, Jiarui Wang, Jiale Li, Meihong Yue, Chuncheng Liu, Libing Ma und Ying Liu. „Integrative analysis of transcriptome complexity in pig granulosa cells by long-read isoform sequencing“. PeerJ 10 (25.05.2022): e13446. http://dx.doi.org/10.7717/peerj.13446.
Der volle Inhalt der QuellePark, Jihye, Kyuho Kang, Yeonghoon Son, Kwang Seok Kim, Keunsoo Kang und Hae-June Lee. „Low-Dose Radiation-Induced Transcriptomic Changes in Diabetic Aortic Endothelial Cells“. Data 8, Nr. 5 (18.05.2023): 92. http://dx.doi.org/10.3390/data8050092.
Der volle Inhalt der QuelleGyorffy, Balazs, und Libero Santarpia. „Abstract PO2-03-08: Uncovering Novel Potential Prognostic Biomarkers in Basal-Like Breast Cancer using Transcriptomic Data of 1,899 Patients“. Cancer Research 84, Nr. 9_Supplement (02.05.2024): PO2–03–08—PO2–03–08. http://dx.doi.org/10.1158/1538-7445.sabcs23-po2-03-08.
Der volle Inhalt der QuelleLindskrog, Sia V., Sofie S. Schmøkel, Iver Nordentoft, Philippe Lamy, Michael Knudsen, Jørgen B. Jensen und Lars Dyrskjøt. „Abstract 3483: Single-nucleus RNA-sequencing of human bladder tumors delineates intra-tumor cellular and subtype heterogeneity“. Cancer Research 82, Nr. 12_Supplement (15.06.2022): 3483. http://dx.doi.org/10.1158/1538-7445.am2022-3483.
Der volle Inhalt der QuelleArce-Leal, Ángela Paulina, Rocío Bautista, Edgar Antonio Rodríguez-Negrete, Miguel Ángel Manzanilla-Ramírez, José Joaquín Velázquez-Monreal, María Elena Santos-Cervantes, Jesús Méndez-Lozano et al. „Gene Expression Profile of Mexican Lime (Citrus aurantifolia) Trees in Response to Huanglongbing Disease caused by Candidatus Liberibacter asiaticus“. Microorganisms 8, Nr. 4 (07.04.2020): 528. http://dx.doi.org/10.3390/microorganisms8040528.
Der volle Inhalt der QuelleDuan, Xin-le, Bi-an Zhao, Ying Liu, Man-qiong Xiong, Nan He, Shao-kang Huang, Wei-fone Huang und Jiang-hong Li. „Development and characterization of six novel microsatellite markers for honey bee parasitic mite Varroa destructor (Mesostigmata: Varroidae) “. Systematic and Applied Acarology 25, Nr. 10 (02.10.2020): 1733–44. http://dx.doi.org/10.11158/saa.25.10.2.
Der volle Inhalt der QuelleChen, Han, Honghua Su, Shuai Zhang, Tianxing Jing, Zhe Liu und Yizhong Yang. „Transcriptomic and Metabolomic Responses in Cotton Plant to Apolygus lucorum Infestation“. Insects 13, Nr. 4 (15.04.2022): 391. http://dx.doi.org/10.3390/insects13040391.
Der volle Inhalt der QuelleGuo, Yaning, Siyu Zhang, Jing Ai, Panpan Zhang, Han Yao, Yunfei Liu und Xiong Zhang. „Transcriptomic and biochemical analyses of drought response mechanism in mung bean (Vignaradiata (L.) Wilczek) leaves“. PLOS ONE 18, Nr. 5 (10.05.2023): e0285400. http://dx.doi.org/10.1371/journal.pone.0285400.
Der volle Inhalt der QuelleXiang, Xiao, Stéphanie Langlois, Marie-Eve St-Pierre, Anna Blinder, Philippe Charron, Tyson E. Graber, Stephanie L. Fowler et al. „Identification of pannexin 1-regulated genes, interactome, and pathways in rhabdomyosarcoma and its tumor inhibitory interaction with AHNAK“. Oncogene 40, Nr. 10 (09.02.2021): 1868–83. http://dx.doi.org/10.1038/s41388-020-01623-2.
Der volle Inhalt der QuelleShang, Yi, Yanbo Wang, Jianyu Deng, Xunyue Liu, Yihao Fang, Qiong Rao und Huiming Wu. „Comparative Transcriptome Analysis Reveals the Mechanism Related to Fluazinam Stress of Panonychus citri (Acarina: Tetranychidae)“. Insects 11, Nr. 11 (26.10.2020): 730. http://dx.doi.org/10.3390/insects11110730.
Der volle Inhalt der QuelleHeyckendorf, Jan, Sebastian Marwitz, Maja Reimann, Korkut Avsar, Andrew R. DiNardo, Gunar Günther, Michael Hoelscher et al. „Prediction of anti-tuberculosis treatment duration based on a 22-gene transcriptomic model“. European Respiratory Journal 58, Nr. 3 (11.02.2021): 2003492. http://dx.doi.org/10.1183/13993003.03492-2020.
Der volle Inhalt der QuelleMcGrew, Brooklyn, Aman Shrivastava, Philip Fernandes, Lubaina Ehsan, Yash Sharma, Dawson Payne, Lillian Dillard et al. „IDENTIFYING RELEVANT PATHWAYS AND BIOMARKERS IN CROHN’S DISEASE USING CONTEXTUALIZED METABOLIC NETWORK MODEL“. Inflammatory Bowel Diseases 27, Supplement_1 (01.01.2021): S9—S10. http://dx.doi.org/10.1093/ibd/izaa347.022.
Der volle Inhalt der QuelleRobinson, Leslie C., Sandro Santagata und Todd C. Hankinson. „Potential evolution of neurosurgical treatment paradigms for craniopharyngioma based on genomic and transcriptomic characteristics“. Neurosurgical Focus 41, Nr. 6 (Dezember 2016): E3. http://dx.doi.org/10.3171/2016.9.focus16308.
Der volle Inhalt der QuellePapadopoulou, Gethsimani, Eleni Manoloudi, Nikolena Repousi, Lemonia Skoura, Tara Hurst und Timokratis Karamitros. „Molecular and Clinical Prognostic Biomarkers of COVID-19 Severity and Persistence“. Pathogens 11, Nr. 3 (02.03.2022): 311. http://dx.doi.org/10.3390/pathogens11030311.
Der volle Inhalt der QuelleYang, Hongyan, Jingyi Lu, Kui Wang, Chaoyan Wu, Bin Yang und Jiaying Zhu. „Transcriptome Analysis Reveals the Venom Genes of the Ectoparasitoid Habrobracon hebetor (Hymenoptera: Braconidae)“. Insects 15, Nr. 6 (05.06.2024): 426. http://dx.doi.org/10.3390/insects15060426.
Der volle Inhalt der QuelleSegaert, Pieter, Marta B. Lopes, Sandra Casimiro, Susana Vinga und Peter J. Rousseeuw. „Robust identification of target genes and outliers in triple-negative breast cancer data“. Statistical Methods in Medical Research 28, Nr. 10-11 (27.08.2018): 3042–56. http://dx.doi.org/10.1177/0962280218794722.
Der volle Inhalt der QuelleNadorp, Bettina, Audrey Lasry, Sanam Loghavi, Ravi Patel, Ben Kelly, Christopher J. Walker, Stephanie LaHaye et al. „The Genomic and Transcriptomic Landscape of Myeloid Sarcoma and Associated Acute Myeloid Leukemia“. Blood 142, Supplement 1 (28.11.2023): 292. http://dx.doi.org/10.1182/blood-2023-182967.
Der volle Inhalt der QuelleAlonso Paz, Sandra, Ignacio Duran, Enrique Grande und Alvaro Pinto. „Evaluation of deep learning techniques (DL) in RNA sequencing data for the prediction of response to immune checkpoint inhibitors in patients with metastatic renal cell cancer m(RCC).“ Journal of Clinical Oncology 41, Nr. 6_suppl (20.02.2023): 641. http://dx.doi.org/10.1200/jco.2023.41.6_suppl.641.
Der volle Inhalt der QuelleSubramani, Jothimani, G. Sathish Kumar und Thippa Reddy Gadekallu. „Gene-Based Predictive Modelling for Enhanced Detection of Systemic Lupus Erythematosus Using CNN-Based DL Algorithm“. Diagnostics 14, Nr. 13 (24.06.2024): 1339. http://dx.doi.org/10.3390/diagnostics14131339.
Der volle Inhalt der QuelleZaccagnini, Germana, Biagina Maimone, Paola Fuschi, Marialucia Longo, Daniel Da Silva, Matteo Carrara, Christine Voellenkle et al. „Hypoxia-Induced miR-210 Is Necessary for Vascular Regeneration upon Acute Limb Ischemia“. International Journal of Molecular Sciences 21, Nr. 1 (24.12.2019): 129. http://dx.doi.org/10.3390/ijms21010129.
Der volle Inhalt der QuelleKim, Hyung-Yong, Hee-Joo Choi, Jeong-Yeon Lee und Gu Kong. „Cancer Target Gene Screening: a web application for breast cancer target gene screening using multi-omics data analysis“. Briefings in Bioinformatics 21, Nr. 2 (29.01.2019): 663–75. http://dx.doi.org/10.1093/bib/bbz003.
Der volle Inhalt der QuelleTang, Howard H. F., Peter D. Sly, Patrick G. Holt, Kathryn E. Holt und Michael Inouye. „Systems biology and big data in asthma and allergy: recent discoveries and emerging challenges“. European Respiratory Journal 55, Nr. 1 (16.10.2019): 1900844. http://dx.doi.org/10.1183/13993003.00844-2019.
Der volle Inhalt der QuelleMédigue, Claudine, Alexandra Calteau, Stéphane Cruveiller, Mathieu Gachet, Guillaume Gautreau, Adrien Josso, Aurélie Lajus et al. „MicroScope—an integrated resource for community expertise of gene functions and comparative analysis of microbial genomic and metabolic data“. Briefings in Bioinformatics 20, Nr. 4 (12.09.2017): 1071–84. http://dx.doi.org/10.1093/bib/bbx113.
Der volle Inhalt der QuelleLuo, Jie, Marien Havé, Gilles Clément, Frédérique Tellier, Thierry Balliau, Alexandra Launay-Avon, Florence Guérard, Michel Zivy und Céline Masclaux-Daubresse. „Integrating multiple omics to identify common and specific molecular changes occurring in Arabidopsis under chronic nitrate and sulfate limitations“. Journal of Experimental Botany 71, Nr. 20 (21.07.2020): 6471–90. http://dx.doi.org/10.1093/jxb/eraa337.
Der volle Inhalt der QuelleLazar, Alexandra. „Recent Data about the Use of Corticosteroids in Sepsis—Review of Recent Literature“. Biomedicines 12, Nr. 5 (30.04.2024): 984. http://dx.doi.org/10.3390/biomedicines12050984.
Der volle Inhalt der QuelleSenevirathna, Jayan Duminda Mahesh, Ryo Yonezawa, Taiki Saka, Yoji Igarashi, Noriko Funasaka, Kazutoshi Yoshitake, Shigeharu Kinoshita und Shuichi Asakawa. „Transcriptomic Insight into the Melon Morphology of Toothed Whales for Aquatic Molecular Developments“. Sustainability 13, Nr. 24 (18.12.2021): 13997. http://dx.doi.org/10.3390/su132413997.
Der volle Inhalt der QuelleYim, Jaewoo, Sung Won Cho, Beomhee Kim, Sungwoo Park, Yong Hee Han und Sang Woo Seo. „Transcriptional Profiling of the Probiotic Escherichia coli Nissle 1917 Strain under Simulated Microgravity“. International Journal of Molecular Sciences 21, Nr. 8 (11.04.2020): 2666. http://dx.doi.org/10.3390/ijms21082666.
Der volle Inhalt der QuelleSung, Kidon, Dan Li, Jungwhan Chon, Ohgew Kweon, Minjae Kim, Joshua Xu, Miseon Park und Saeed A. Khan. „Transcriptomic Response of Human Nosocomial Pathogen Pseudomonas aeruginosa Biofilms Following Continuous Exposure to Antibiotic-Impregnated Catheters“. Data 7, Nr. 3 (17.03.2022): 35. http://dx.doi.org/10.3390/data7030035.
Der volle Inhalt der QuelleFeinstein, Yael, Jennifer Claire Walker, Mark J. Peters, Simon Nadel, Nazima Pathan, Naomi Edmonds, Jethro Herberg et al. „Cohort profile of the Biomarkers of Acute Serious Illness in Children (BASIC) study: a prospective multicentre cohort study in critically ill children“. BMJ Open 8, Nr. 11 (November 2018): e024729. http://dx.doi.org/10.1136/bmjopen-2018-024729.
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