Auswahl der wissenschaftlichen Literatur zum Thema „Lateral gene transfers“
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Zeitschriftenartikel zum Thema "Lateral gene transfers"
Andersson, Jan O., und Andrew J. Roger. „Evolutionary Analyses of the Small Subunit of Glutamate Synthase: Gene Order Conservation, Gene Fusions, and Prokaryote-to- Eukaryote Lateral Gene Transfers“. Eukaryotic Cell 1, Nr. 2 (April 2002): 304–10. http://dx.doi.org/10.1128/ec.1.2.304-310.2002.
Der volle Inhalt der QuelleTHUILLARD, MARC, und VINCENT MOULTON. „IDENTIFYING AND RECONSTRUCTING LATERAL TRANSFERS FROM DISTANCE MATRICES BY COMBINING THE MINIMUM CONTRADICTION METHOD AND NEIGHBOR-NET“. Journal of Bioinformatics and Computational Biology 09, Nr. 04 (August 2011): 453–70. http://dx.doi.org/10.1142/s0219720011005409.
Der volle Inhalt der QuelleTofigh, A., M. Hallett und J. Lagergren. „Simultaneous Identification of Duplications and Lateral Gene Transfers“. IEEE/ACM Transactions on Computational Biology and Bioinformatics 8, Nr. 2 (März 2011): 517–35. http://dx.doi.org/10.1109/tcbb.2010.14.
Der volle Inhalt der QuelleMarri, Pradeep Reddy, John P. Bannantine, Michael L. Paustian und G. Brian Golding. „Lateral gene transfer in Mycobacterium avium subspecies paratuberculosis“. Canadian Journal of Microbiology 52, Nr. 6 (01.06.2006): 560–69. http://dx.doi.org/10.1139/w06-001.
Der volle Inhalt der QuelleZhi-Zhong Chen, Fei Deng und Lusheng Wang. „Simultaneous Identification of Duplications, Losses, and Lateral Gene Transfers“. IEEE/ACM Transactions on Computational Biology and Bioinformatics 9, Nr. 5 (September 2012): 1515–28. http://dx.doi.org/10.1109/tcbb.2012.79.
Der volle Inhalt der QuelleYubuki, Naoji, Luis Javier Galindo, Guillaume Reboul, Purificación López-García, Matthew W. Brown, Nicolas Pollet und David Moreira. „Ancient Adaptive Lateral Gene Transfers in the Symbiotic Opalina–Blastocystis Stramenopile Lineage“. Molecular Biology and Evolution 37, Nr. 3 (06.11.2019): 651–59. http://dx.doi.org/10.1093/molbev/msz250.
Der volle Inhalt der QuelleFriedrich, Michael W. „Phylogenetic Analysis Reveals Multiple Lateral Transfers of Adenosine-5′-Phosphosulfate Reductase Genes among Sulfate-Reducing Microorganisms“. Journal of Bacteriology 184, Nr. 1 (01.01.2002): 278–89. http://dx.doi.org/10.1128/jb.184.1.278-289.2002.
Der volle Inhalt der QuelleAbby, Sophie S., Eric Tannier, Manolo Gouy und Vincent Daubin. „Detecting lateral gene transfers by statistical reconciliation of phylogenetic forests“. BMC Bioinformatics 11, Nr. 1 (2010): 324. http://dx.doi.org/10.1186/1471-2105-11-324.
Der volle Inhalt der QuelleAlsmark, Cecilia, Peter G. Foster, Thomas Sicheritz-Ponten, Sirintra Nakjang, T. Martin Embley und Robert P. Hirt. „Patterns of prokaryotic lateral gene transfers affecting parasitic microbial eukaryotes“. Genome Biology 14, Nr. 2 (2013): R19. http://dx.doi.org/10.1186/gb-2013-14-2-r19.
Der volle Inhalt der QuelleGophna, Uri. „Complexity Apparently Is Not a Barrier to Lateral Gene Transfers“. Microbe Magazine 4, Nr. 12 (01.12.2009): 549–53. http://dx.doi.org/10.1128/microbe.4.549.1.
Der volle Inhalt der QuelleDissertationen zum Thema "Lateral gene transfers"
Vieira, Rute Gomes Velosa. „Bayesian phylogenetic modelling of lateral gene transfers“. Thesis, University of Newcastle upon Tyne, 2015. http://hdl.handle.net/10443/3018.
Der volle Inhalt der QuelleTofigh, Ali. „Using Trees to Capture Reticulate Evolution : Lateral Gene Transfers and Cancer Progression“. Doctoral thesis, KTH, Beräkningsbiologi, CB, 2009. http://urn.kb.se/resolve?urn=urn:nbn:se:kth:diva-10608.
Der volle Inhalt der QuelleQC 20100812
Belliardo, Carole. „Étude des transferts horizontaux de gènes chez les nématodes phytoparasites par l'exploitation de métagénomes du sol“. Electronic Thesis or Diss., Université Côte d'Azur, 2022. http://theses.univ-cotedazur.fr/2022COAZ6032.
Der volle Inhalt der QuellePlant-parasitic nematodes (PPN) are among the most important crop pests and threaten the world's food production. Besides the need to understand their biology to develop new control strategies, they are fascinating organisms in terms of genomic evolution. Plant parasitism has evolved several times independently in nematodes with some convergent evolutionary processes. For instance, all studied PPN have acquired bacterial and fungal genes by horizontal gene transfers (HGT). Some of the acquired genes are involved in essential parasitic functions like plant cell wall degradation or processing nutrients from the plant. However, several major questions concerning their origin, evolutionary fate and distribution in the genomes and timing of acquisition events remain unsolved. Most PPN live in soil; thus, we hypothesised that these genes originated from soil-dwelling microorganisms. However, the underrepresentation of soil microorganisms in generalist sequence libraries has previously limited HGT analyses.To circumvent this problem, we built a protein library including more than 6,800 soil metagenomes from the Joint Genome Institute's IMG/M server. The first challenge was to make this massive dataset more accurate and suitable for HGT analysis in PPN genomes. An important issue in metagenomic data is the underrepresentation of eukaryotes and their annotation with prokaryotic tools. To better represent the pool of genes present in the natural environments of PPN, we identified eukaryotic contigs and re-predicted proteins using Augustus, a eukaryotic dedicated gene predictor. Moreover, we reduced the protein sequence redundancy and refined the taxonomic assignment. After all these steps, we obtained an improved and non-redundant database that was more representative of the soil's natural biodiversity. This soil protein library, two times larger than the classic library, contains mainly organisms genetically divergent than lab-cultured.Then, we performed an HGT detection on proteins from 18 plant-parasitic nematode genomes of the Tylenchina clade, constituting a highly diverse group of PPN phenotypes, against our library enriched with soil protein. After manual curation, the proportion of genes acquired by horizontal transfers with phylogenetic confirmation is between 0.5 to 1.9% to protein-coding genes originating from HGT in PPN genomes. Those genes mainly originate from bacteria, but we also observed HGT from eukaryotic kingdoms such as fungi, protists and plants. The most represented taxa in donors are soil-dwelling species of clades Burkholderiaceae, Proteobacteria, Actinobacteria, Rhizobiales and Dikarya. The usage of metagenomic data clarified the history of previously described HGTs but also identified hundreds of new HGTs. Functional analyses of the newly identified HGTs indicate a wide diversity of potential functions whose biological implications can be more precisely described in in-vitro experiments. Integrating environmental data in our reference library has allowed us to extend the detection of HGTs and to complete the catalog of potential donor offspring
Lester, Leo. „On Lateral Gene Transfer“. Thesis, University of Reading, 2006. http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.487489.
Der volle Inhalt der QuelleCheeseman, Kevin. „Aspects of Penicillium genomics : Molecular combing genome assembly, genetic exchange in food and potential for secondary metabolite production“. Thesis, Paris 11, 2013. http://www.theses.fr/2013PA112280/document.
Der volle Inhalt der QuellePenicillium are filamentous fungi belonging to the Ascomycota genus. Penicillium species have been used by Man for centuries in food making processes. More recently they have also been used in the biotechnology industry for the production of compounds of pharmaceutical interest. Some Penicillium species are food spoilage agents, pathogens of plants including fruits. Aspects of their genomics are largely unknown. In this study, we analysed the genomes of two newly sequenced species, Penicillium roqueforti and Penicillium camemberti. Here we report the development of a new methodology for improving and validating genome assembly using an original single DNA molecule technology, Molecular Combing. Using this methodology we were able to produce a high quality genome assembly of Penicillium roqueforti. This work also reports the multiple and recurrent horizontal transfer of a large genomic island of over half a megabase between several Penicillium species. This horizontal transfer indicates a higher frequency of lateral genetic exchange between cheesemaking fungi than previously expected. Finally, we present an early assessment of the genomic potential for secondary metabolite production in these important food associated penicilliums
Addario-Berry, Dana. „An analysis of models and algorithms for gene duplication and lateral gene transfer /“. Thesis, McGill University, 2004. http://digitool.Library.McGill.CA:80/R/?func=dbin-jump-full&object_id=80161.
Der volle Inhalt der QuelleThis thesis explores several aspects of both of these simplifed models of evolution. A brief exposition of the models is presented, along with previous results and various extensions to these models.
The expected number of gene duplications needed to explain disagreements between a random gene and species tree is investigated.
A method for incorporating edge weights into the species tree is proposed.
Khan, Mehmood Alam. „Computational Problems in Modeling Evolution and Inferring Gene Families“. Doctoral thesis, KTH, Beräkningsvetenskap och beräkningsteknik (CST), 2016. http://urn.kb.se/resolve?urn=urn:nbn:se:kth:diva-193637.
Der volle Inhalt der QuelleQC 20161010
Wilber, Matthew. „Building a History of Horizontal Gene Transfer in E. Coli“. Scholarship @ Claremont, 2016. http://scholarship.claremont.edu/hmc_theses/75.
Der volle Inhalt der QuelleYan, Yongpan. „Computational analyses of microbial genomes operons, protein families and lateral gene transfer /“. College Park, Md. : University of Maryland, 2005. http://hdl.handle.net/1903/2596.
Der volle Inhalt der QuelleThesis research directed by: Cell Biology & Molecular Genetics. Title from t.p. of PDF. Includes bibliographical references. Published by UMI Dissertation Services, Ann Arbor, Mich. Also available in paper.
Andam, Cheryl Marie Palacay. „Role of lateral gene transfer in the evolution of legume nodule symbionts“. Diss., Online access via UMI:, 2007.
Den vollen Inhalt der Quelle findenBücher zum Thema "Lateral gene transfers"
Gophna, Uri, Hrsg. Lateral Gene Transfer in Evolution. New York, NY: Springer New York, 2013. http://dx.doi.org/10.1007/978-1-4614-7780-8.
Der volle Inhalt der QuelleGophna, Uri. Lateral Gene Transfer in Evolution. Springer New York, 2015.
Den vollen Inhalt der Quelle findenLateral Gene Transfer in Evolution. Springer-Verlag New York Inc., 2013.
Den vollen Inhalt der Quelle findenGophna, Uri. Lateral Gene Transfer in Evolution. Springer London, Limited, 2013.
Den vollen Inhalt der Quelle findenReticulate Evolution: Symbiogenesis, Lateral Gene Transfer, Hybridization and Infectious Heredity. Springer, 2015.
Den vollen Inhalt der Quelle findenGontier, Nathalie. Reticulate Evolution: Symbiogenesis, Lateral Gene Transfer, Hybridization and Infectious Heredity. Springer, 2015.
Den vollen Inhalt der Quelle findenMagowan, Fiona. Mission Music as a Mode of Intercultural Transmission, Charisma, and Memory in Northern Australia. Herausgegeben von Jonathan Dueck und Suzel Ana Reily. Oxford University Press, 2013. http://dx.doi.org/10.1093/oxfordhb/9780199859993.013.001.
Der volle Inhalt der QuelleBuchteile zum Thema "Lateral gene transfers"
Davín, Adrián A., Dominik Schrempf, Tom A. Williams, Philip Hugenholtz und Gergely J. Szöllősi. „Relative Time Inference Using Lateral Gene Transfers“. In Methods in Molecular Biology, 75–94. New York, NY: Springer US, 2022. http://dx.doi.org/10.1007/978-1-0716-2691-7_4.
Der volle Inhalt der QuelleLópez-García, Purificación. „Lateral Gene Transfer“. In Encyclopedia of Astrobiology, 914–15. Berlin, Heidelberg: Springer Berlin Heidelberg, 2011. http://dx.doi.org/10.1007/978-3-642-11274-4_1727.
Der volle Inhalt der QuelleLópez-García, Purificación. „Lateral Gene Transfer“. In Encyclopedia of Astrobiology, 1372–73. Berlin, Heidelberg: Springer Berlin Heidelberg, 2015. http://dx.doi.org/10.1007/978-3-662-44185-5_1727.
Der volle Inhalt der QuelleGooch, Jan W. „Lateral Gene Transfer“. In Encyclopedic Dictionary of Polymers, 903. New York, NY: Springer New York, 2011. http://dx.doi.org/10.1007/978-1-4419-6247-8_14096.
Der volle Inhalt der QuelleFritz, Hans-Joachim. „Lateral Gene Transfer“. In Encyclopedia of Geobiology, 533–35. Dordrecht: Springer Netherlands, 2011. http://dx.doi.org/10.1007/978-1-4020-9212-1_126.
Der volle Inhalt der QuelleLópez-García, Purificación. „Lateral Gene Transfer“. In Encyclopedia of Astrobiology, 1–2. Berlin, Heidelberg: Springer Berlin Heidelberg, 2014. http://dx.doi.org/10.1007/978-3-642-27833-4_1727-3.
Der volle Inhalt der QuelleLópez-García, Purificación. „Lateral Gene Transfer“. In Encyclopedia of Astrobiology, 1660–61. Berlin, Heidelberg: Springer Berlin Heidelberg, 2023. http://dx.doi.org/10.1007/978-3-662-65093-6_1727.
Der volle Inhalt der QuelleSkippington, Elizabeth, und Mark A. Ragan. „Lateral Genetic Transfer and Cellular Networks“. In Lateral Gene Transfer in Evolution, 123–35. New York, NY: Springer New York, 2013. http://dx.doi.org/10.1007/978-1-4614-7780-8_6.
Der volle Inhalt der QuelleDunning Hotopp, Julie C. „Lateral Gene Transfer in Multicellular Organisms“. In Lateral Gene Transfer in Evolution, 161–79. New York, NY: Springer New York, 2013. http://dx.doi.org/10.1007/978-1-4614-7780-8_9.
Der volle Inhalt der QuelleLevin, Itay, Moshe Giladi und Uri Gophna. „Lateral Gene Transfer and the Synthesis of Thymidine“. In Lateral Gene Transfer in Evolution, 3–14. New York, NY: Springer New York, 2013. http://dx.doi.org/10.1007/978-1-4614-7780-8_1.
Der volle Inhalt der QuelleKonferenzberichte zum Thema "Lateral gene transfers"
Chen, Zhi-Zhong, Fei Deng und Lusheng Wang. „Identifying duplications and lateral gene transfers simultaneously and rapidly“. In 2013 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB). IEEE, 2013. http://dx.doi.org/10.1109/cibcb.2013.6595398.
Der volle Inhalt der QuelleWerren, Jack. „How important are bacteria-eukaryote lateral gene transfers to arthropod evolution?“ In 2016 International Congress of Entomology. Entomological Society of America, 2016. http://dx.doi.org/10.1603/ice.2016.93233.
Der volle Inhalt der QuelleADDARIO-BERRY, L., M. HALLETT und J. LAGERGREN. „TOWARDS IDENTIFYING LATERAL GENE TRANSFER EVENTS“. In Proceedings of the Pacific Symposium. WORLD SCIENTIFIC, 2002. http://dx.doi.org/10.1142/9789812776303_0027.
Der volle Inhalt der QuelleRAGAN, MARK A. „AUTOMATING THE SEARCH FOR LATERAL GENE TRANSFER“. In 4th Asia-Pacific Bioinformatics Conference. PUBLISHED BY IMPERIAL COLLEGE PRESS AND DISTRIBUTED BY WORLD SCIENTIFIC PUBLISHING CO., 2005. http://dx.doi.org/10.1142/9781860947292_0002.
Der volle Inhalt der QuelleHallett, M. T., und J. Lagergren. „Efficient algorithms for lateral gene transfer problems“. In the fifth annual international conference. New York, New York, USA: ACM Press, 2001. http://dx.doi.org/10.1145/369133.369188.
Der volle Inhalt der QuelleDunning-Hotopp, Julie C. „Lateral gene transfer from bacteria to animals, including humans“. In 2016 International Congress of Entomology. Entomological Society of America, 2016. http://dx.doi.org/10.1603/ice.2016.93235.
Der volle Inhalt der QuelleChen, Kuo-Huey, Taeyoung Han, Bahram Khalighi und Philip Klaus. „Air Cooling Concepts for Li-Ion Battery Pack in Cell Level“. In ASME 2017 Heat Transfer Summer Conference. American Society of Mechanical Engineers, 2017. http://dx.doi.org/10.1115/ht2017-4701.
Der volle Inhalt der QuelleDaskalakis, Constantinos, und Sebastien Roch. „Species Trees from Gene Trees Despite a High Rate of Lateral Genetic Transfer: A Tight Bound (Extended Abstract)“. In Proceedings of the Twenty-Seventh Annual ACM-SIAM Symposium on Discrete Algorithms. Philadelphia, PA: Society for Industrial and Applied Mathematics, 2015. http://dx.doi.org/10.1137/1.9781611974331.ch110.
Der volle Inhalt der QuelleBerichte der Organisationen zum Thema "Lateral gene transfers"
Barkay, Tamar, und Patricia Sobecky. Lateral gene transfer in the subsurface. Office of Scientific and Technical Information (OSTI), August 2007. http://dx.doi.org/10.2172/913060.
Der volle Inhalt der QuelleHoward Ochman. LATERAL GENE TRANSFER AND THE HISTORY OF BACTERIAL GENOMES. Office of Scientific and Technical Information (OSTI), Februar 2006. http://dx.doi.org/10.2172/876510.
Der volle Inhalt der QuelleSobecky, Patricia A. The Role of the Horizontal Gene Pool and Lateral Gene Transfer in Enhancing Microbial Activities in Marine Sediments. Fort Belvoir, VA: Defense Technical Information Center, Mai 2006. http://dx.doi.org/10.21236/ada447026.
Der volle Inhalt der QuelleBarkay, Tamar. Lateral Gene Transfer Among Subsurface Bacteria: Horizontal Gene Flow in Microbial Communities: A Special Focus Issue, Web Focus and Supplement. Office of Scientific and Technical Information (OSTI), November 2009. http://dx.doi.org/10.2172/967075.
Der volle Inhalt der QuelleNewton, Ronald, Joseph Riov und John Cairney. Isolation and Functional Analysis of Drought-Induced Genes in Pinus. United States Department of Agriculture, September 1993. http://dx.doi.org/10.32747/1993.7568752.bard.
Der volle Inhalt der QuelleGera, Abed, Abed Watad, P. Ueng, Hei-Ti Hsu, Kathryn Kamo, Peter Ueng und A. Lipsky. Genetic Transformation of Flowering Bulb Crops for Virus Resistance. United States Department of Agriculture, Januar 2001. http://dx.doi.org/10.32747/2001.7575293.bard.
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